RNA–Protein interactions for RNA: ENST00000513956.5

CCND3-219, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-219ENST00000513956 RBM46Q8TBY0 533 aaKnown RBP23.71■■□□□ 1.39
CCND3-219ENST00000513956 DDX21Q9NR30 783 aaKnown RBP eCLIP23.71■■□□□ 1.39
CCND3-219ENST00000513956 LTBP3Q9NS15 1303 aa23.7■■□□□ 1.38
CCND3-219ENST00000513956 HTRA3P83110 453 aa23.7■■□□□ 1.38
CCND3-219ENST00000513956 DPY19L2Q6NUT2 758 aa23.7■■□□□ 1.38
CCND3-219ENST00000513956 SYNE4Q8N205 404 aa23.7■■□□□ 1.38
CCND3-219ENST00000513956 UTP14AQ9BVJ6 771 aaKnown RBP23.7■■□□□ 1.38
CCND3-219ENST00000513956 ZNF316A6NFI3 1004 aaPredicted RBP23.69■■□□□ 1.38
CCND3-219ENST00000513956 CRY2Q49AN0 593 aa23.69■■□□□ 1.38
CCND3-219ENST00000513956 DDNO94850 711 aaPredicted RBP23.68■■□□□ 1.38
CCND3-219ENST00000513956 VEGFAP15692 232 aaPredicted RBP23.68■■□□□ 1.38
CCND3-219ENST00000513956 FKBP4Q02790 459 aaKnown RBP eCLIP23.68■■□□□ 1.38
CCND3-219ENST00000513956 PARP10Q53GL7 1025 aa23.68■■□□□ 1.38
CCND3-219ENST00000513956 POTECB2RU33 542 aa23.67■■□□□ 1.38
CCND3-219ENST00000513956 IBTKQ9P2D0 1353 aaPredicted RBP23.66■■□□□ 1.38
CCND3-219ENST00000513956 ZNF853P0CG23 659 aa23.66■■□□□ 1.38
CCND3-219ENST00000513956 HCLS1P14317 486 aaPredicted RBP23.66■■□□□ 1.38
CCND3-219ENST00000513956 NLRP10Q86W26 655 aa23.66■■□□□ 1.38
CCND3-219ENST00000513956 RBM17Q96I25 401 aaKnown RBP23.66■■□□□ 1.38
CCND3-219ENST00000513956 APLP1P51693 650 aa23.65■■□□□ 1.38
CCND3-219ENST00000513956 TCIRG1Q13488 830 aa23.65■■□□□ 1.38
CCND3-219ENST00000513956 RTKN2Q8IZC4 609 aa23.65■■□□□ 1.38
CCND3-219ENST00000513956 NLRP3Q96P20 1036 aa23.65■■□□□ 1.38
CCND3-219ENST00000513956 IFT57Q9NWB7 429 aa23.65■■□□□ 1.38
CCND3-219ENST00000513956 DBF4Q9UBU7 674 aaPredicted RBP23.65■■□□□ 1.38
CCND3-219ENST00000513956 TRMT112Q9UI30 125 aaKnown RBP23.65■■□□□ 1.38
CCND3-219ENST00000513956 LAMB2P55268 1798 aa23.65■■□□□ 1.38
CCND3-219ENST00000513956 ATP5J2-PTCD1G3V325 749 aa23.64■■□□□ 1.37
CCND3-219ENST00000513956 GNAI1P63096 354 aa23.64■■□□□ 1.37
CCND3-219ENST00000513956 HSP90AB3PQ58FF7 597 aa23.64■■□□□ 1.37
CCND3-219ENST00000513956 WDR90Q96KV7 1748 aa23.64■■□□□ 1.37
CCND3-219ENST00000513956 PPEF1O14829 653 aaPredicted RBP23.63■■□□□ 1.37
CCND3-219ENST00000513956 HOXA10P31260 410 aaPredicted RBP23.63■■□□□ 1.37
CCND3-219ENST00000513956 ANKRD13DQ6ZTN6 518 aa23.63■■□□□ 1.37
CCND3-219ENST00000513956 C8orf58Q8NAV2 365 aa23.63■■□□□ 1.37
CCND3-219ENST00000513956 MRS2Q9HD23 443 aa23.63■■□□□ 1.37
CCND3-219ENST00000513956 ZNF541Q9H0D2 1346 aa23.62■■□□□ 1.37
CCND3-219ENST00000513956 TAF1P21675 1872 aa23.62■■□□□ 1.37
CCND3-219ENST00000513956 ANP32CO43423 234 aa23.62■■□□□ 1.37
CCND3-219ENST00000513956 HOXB7P09629 217 aa23.62■■□□□ 1.37
CCND3-219ENST00000513956 FSTL1Q12841 308 aa23.62■■□□□ 1.37
CCND3-219ENST00000513956 RTL5Q5HYW3 569 aaPredicted RBP23.62■■□□□ 1.37
CCND3-219ENST00000513956 SMC1BQ8NDV3 1235 aa23.62■■□□□ 1.37
CCND3-219ENST00000513956 PHAXQ9H814 394 aaKnown RBP23.62■■□□□ 1.37
CCND3-219ENST00000513956 SALL2Q9Y467 1007 aaPredicted RBP23.62■■□□□ 1.37
CCND3-219ENST00000513956 RIC1Q4ADV7 1423 aa23.61■■□□□ 1.37
CCND3-219ENST00000513956 IARSP41252 1262 aaKnown RBP23.61■■□□□ 1.37
CCND3-219ENST00000513956 CALD1Q05682 793 aaKnown RBP23.61■■□□□ 1.37
CCND3-219ENST00000513956 PLBD2Q8NHP8 589 aa23.61■■□□□ 1.37
CCND3-219ENST00000513956 TSR2Q969E8 191 aaKnown RBP23.61■■□□□ 1.37
CCND3-219ENST00000513956 POTEIP0CG38 1075 aa23.6■■□□□ 1.37
CCND3-219ENST00000513956 POTEJP0CG39 1038 aa23.6■■□□□ 1.37
CCND3-219ENST00000513956 SLC10A5Q5PT55 438 aa23.6■■□□□ 1.37
CCND3-219ENST00000513956 CRAMP1Q96RY5 1269 aa23.6■■□□□ 1.37
CCND3-219ENST00000513956 HYPKQ9NX55 129 aa23.6■■□□□ 1.37
CCND3-219ENST00000513956 ABCC4O15439 1325 aa23.59■■□□□ 1.37
CCND3-219ENST00000513956 TSPYL6Q8N831 410 aa23.58■■□□□ 1.37
CCND3-219ENST00000513956 FAM89AQ96GI7 184 aa23.58■■□□□ 1.37
CCND3-219ENST00000513956 SNED1Q8TER0 1413 aa23.58■■□□□ 1.36
CCND3-219ENST00000513956 SH3TC1Q8TE82 1336 aa23.58■■□□□ 1.36
CCND3-219ENST00000513956 COL4A5P29400 1685 aa23.57■■□□□ 1.36
CCND3-219ENST00000513956 RIC3Q7Z5B4 369 aa23.57■■□□□ 1.36
CCND3-219ENST00000513956 DDX60Q8IY21 1712 aaKnown RBP23.56■■□□□ 1.36
CCND3-219ENST00000513956 DNAJC5GQ8N7S2 189 aa23.56■■□□□ 1.36
CCND3-219ENST00000513956 PSMD1Q99460 953 aa23.56■■□□□ 1.36
CCND3-219ENST00000513956 ISCA1Q9BUE6 129 aa23.56■■□□□ 1.36
CCND3-219ENST00000513956 JDP2Q8WYK2 163 aa23.55■■□□□ 1.36
CCND3-219ENST00000513956 GOLGA2Q08379 1002 aa23.54■■□□□ 1.36
CCND3-219ENST00000513956 CC2D2BQ6DHV5 1058 aa23.54■■□□□ 1.36
CCND3-219ENST00000513956 DDX46Q7L014 1031 aaKnown RBP23.54■■□□□ 1.36
CCND3-219ENST00000513956 WWC1Q8IX03 1113 aa23.54■■□□□ 1.36
CCND3-219ENST00000513956 LARGE2Q8N3Y3 721 aa23.54■■□□□ 1.36
CCND3-219ENST00000513956 JARID2Q92833 1246 aaPredicted RBP23.54■■□□□ 1.36
CCND3-219ENST00000513956 TMX4Q9H1E5 349 aaPredicted RBP23.54■■□□□ 1.36
CCND3-219ENST00000513956 GJA3Q9Y6H8 435 aa23.54■■□□□ 1.36
CCND3-219ENST00000513956 EAPPQ56P03 285 aaPredicted RBP23.53■■□□□ 1.36
CCND3-219ENST00000513956 MYD88Q99836 296 aa23.53■■□□□ 1.36
CCND3-219ENST00000513956 ATP6V0A2Q9Y487 856 aa23.53■■□□□ 1.36
CCND3-219ENST00000513956 RNF123Q5XPI4 1314 aa23.53■■□□□ 1.36
CCND3-219ENST00000513956 FZD9O00144 591 aa23.52■■□□□ 1.36
CCND3-219ENST00000513956 PPIP5K2O43314 1243 aa23.51■■□□□ 1.35
CCND3-219ENST00000513956 AOC3Q16853 763 aa23.51■■□□□ 1.35
CCND3-219ENST00000513956 TAF1DQ9H5J8 278 aaPredicted RBP23.51■■□□□ 1.35
CCND3-219ENST00000513956 SCN4AP35499 1836 aa23.51■■□□□ 1.35
CCND3-219ENST00000513956 IQCA1LA6NCM1 817 aa23.5■■□□□ 1.35
CCND3-219ENST00000513956 CCDC30Q5VVM6 783 aa23.5■■□□□ 1.35
CCND3-219ENST00000513956 L3MBTL3Q96JM7 780 aaPredicted RBP23.5■■□□□ 1.35
CCND3-219ENST00000513956 COL4A1P02462 1669 aa23.49■■□□□ 1.35
CCND3-219ENST00000513956 BBOX1O75936 387 aa23.49■■□□□ 1.35
CCND3-219ENST00000513956 EIF6P56537 245 aaKnown RBP23.49■■□□□ 1.35
CCND3-219ENST00000513956 GRAPQ13588 217 aa23.49■■□□□ 1.35
CCND3-219ENST00000513956 CHADLQ6NUI6 762 aa23.49■■□□□ 1.35
CCND3-219ENST00000513956 FAM9BQ8IZU0 186 aa23.49■■□□□ 1.35
CCND3-219ENST00000513956 GRAPLQ8TC17 118 aaPredicted RBP23.49■■□□□ 1.35
CCND3-219ENST00000513956 CLEC11AQ9Y240 323 aa23.49■■□□□ 1.35
CCND3-219ENST00000513956 IRS4O14654 1257 aaPredicted RBP23.48■■□□□ 1.35
CCND3-219ENST00000513956 CCDC27Q2M243 656 aa23.48■■□□□ 1.35
CCND3-219ENST00000513956 DPP8Q6V1X1 898 aaPredicted RBP23.48■■□□□ 1.35
CCND3-219ENST00000513956 SP8Q8IXZ3 490 aa23.48■■□□□ 1.35
CCND3-219ENST00000513956 NIM1KQ8IY84 436 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms