RNA–Protein interactions for RNA: ENST00000513507.5

APBB3-220, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 3

Gene APBB3, Length 723 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-220ENST00000513507 DBF4Q9UBU7 674 aaPredicted RBP20.3■□□□□ 0.84
APBB3-220ENST00000513507 GPTP24298 496 aa20.29■□□□□ 0.84
APBB3-220ENST00000513507 TCIRG1Q13488 830 aa20.29■□□□□ 0.84
APBB3-220ENST00000513507 CCDC93Q567U6 631 aa20.29■□□□□ 0.84
APBB3-220ENST00000513507 HSP90AB3PQ58FF7 597 aa20.29■□□□□ 0.84
APBB3-220ENST00000513507 DUSP27Q5VZP5 1158 aa20.29■□□□□ 0.84
APBB3-220ENST00000513507 CRAMP1Q96RY5 1269 aa20.29■□□□□ 0.84
APBB3-220ENST00000513507 FAM177BA6PVY3 158 aa20.28■□□□□ 0.84
APBB3-220ENST00000513507 POTECB2RU33 542 aa20.28■□□□□ 0.84
APBB3-220ENST00000513507 GTF2E1P29083 439 aaPredicted RBP20.28■□□□□ 0.84
APBB3-220ENST00000513507 RTKN2Q8IZC4 609 aa20.28■□□□□ 0.84
APBB3-220ENST00000513507 CHPF2Q9P2E5 772 aa20.28■□□□□ 0.84
APBB3-220ENST00000513507 FKBP4Q02790 459 aaKnown RBP eCLIP20.27■□□□□ 0.84
APBB3-220ENST00000513507 GRIPAP1Q4V328 841 aa20.27■□□□□ 0.84
APBB3-220ENST00000513507 HDGFL1Q5TGJ6 251 aa20.27■□□□□ 0.84
APBB3-220ENST00000513507 CC2D2BQ6DHV5 1058 aa20.27■□□□□ 0.84
APBB3-220ENST00000513507 NLRP10Q86W26 655 aa20.27■□□□□ 0.84
APBB3-220ENST00000513507 PLBD2Q8NHP8 589 aa20.27■□□□□ 0.84
APBB3-220ENST00000513507 RRAGCQ9HB90 399 aa20.27■□□□□ 0.84
APBB3-220ENST00000513507 LAS1LQ9Y4W2 734 aaKnown RBP20.27■□□□□ 0.84
APBB3-220ENST00000513507 FSTL1Q12841 308 aa20.26■□□□□ 0.83
APBB3-220ENST00000513507 TRIM28Q13263 835 aaKnown RBP20.26■□□□□ 0.83
APBB3-220ENST00000513507 PSMD1Q99460 953 aa20.26■□□□□ 0.83
APBB3-220ENST00000513507 UTP14AQ9BVJ6 771 aaKnown RBP20.26■□□□□ 0.83
APBB3-220ENST00000513507 HYPKQ9NX55 129 aa20.26■□□□□ 0.83
APBB3-220ENST00000513507 VEGFAP15692 232 aaPredicted RBP20.25■□□□□ 0.83
APBB3-220ENST00000513507 ANKRD13DQ6ZTN6 518 aa20.25■□□□□ 0.83
APBB3-220ENST00000513507 NECTIN2Q92692 538 aa20.25■□□□□ 0.83
APBB3-220ENST00000513507 ISCA1Q9BUE6 129 aa20.25■□□□□ 0.83
APBB3-220ENST00000513507 ZNF219Q9P2Y4 722 aaPredicted RBP20.25■□□□□ 0.83
APBB3-220ENST00000513507 SCN4AP35499 1836 aa20.25■□□□□ 0.83
APBB3-220ENST00000513507 DDX60Q8IY21 1712 aaKnown RBP20.24■□□□□ 0.83
APBB3-220ENST00000513507 DPY19L2Q6NUT2 758 aa20.24■□□□□ 0.83
APBB3-220ENST00000513507 CACNA1FO60840 1977 aa20.24■□□□□ 0.83
APBB3-220ENST00000513507 AIMP1Q12904 312 aaKnown RBP20.23■□□□□ 0.83
APBB3-220ENST00000513507 C3orf67Q6ZVT6 689 aa20.23■□□□□ 0.83
APBB3-220ENST00000513507 NLRP3Q96P20 1036 aa20.23■□□□□ 0.83
APBB3-220ENST00000513507 OLFM4Q6UX06 510 aa20.22■□□□□ 0.83
APBB3-220ENST00000513507 WWC1Q8IX03 1113 aa20.22■□□□□ 0.83
APBB3-220ENST00000513507 C8orf58Q8NAV2 365 aa20.22■□□□□ 0.83
APBB3-220ENST00000513507 RBM17Q96I25 401 aaKnown RBP20.22■□□□□ 0.83
APBB3-220ENST00000513507 CHMP4AQ9BY43 222 aa20.22■□□□□ 0.83
APBB3-220ENST00000513507 IL16Q14005 1332 aa20.22■□□□□ 0.83
APBB3-220ENST00000513507 APLP1P51693 650 aa20.21■□□□□ 0.83
APBB3-220ENST00000513507 RPGRQ92834 1020 aaKnown RBP20.21■□□□□ 0.83
APBB3-220ENST00000513507 L3MBTL3Q96JM7 780 aaPredicted RBP20.21■□□□□ 0.83
APBB3-220ENST00000513507 FZD9O00144 591 aa20.2■□□□□ 0.82
APBB3-220ENST00000513507 ANP32CO43423 234 aa20.2■□□□□ 0.82
APBB3-220ENST00000513507 C16orf71Q8IYS4 520 aaPredicted RBP20.19■□□□□ 0.82
APBB3-220ENST00000513507 SYNE4Q8N205 404 aa20.19■□□□□ 0.82
APBB3-220ENST00000513507 DNAJC5GQ8N7S2 189 aa20.19■□□□□ 0.82
APBB3-220ENST00000513507 VPS33BQ9H267 617 aa20.19■□□□□ 0.82
APBB3-220ENST00000513507 SH3TC1Q8TE82 1336 aa20.19■□□□□ 0.82
APBB3-220ENST00000513507 TAF1P21675 1872 aa20.18■□□□□ 0.82
APBB3-220ENST00000513507 BBOX1O75936 387 aa20.18■□□□□ 0.82
APBB3-220ENST00000513507 IARSP41252 1262 aaKnown RBP20.18■□□□□ 0.82
APBB3-220ENST00000513507 TRMT112Q9UI30 125 aaKnown RBP20.18■□□□□ 0.82
APBB3-220ENST00000513507 LRRC37AA6NMS7 1700 aa20.18■□□□□ 0.82
APBB3-220ENST00000513507 SMC1BQ8NDV3 1235 aa20.17■□□□□ 0.82
APBB3-220ENST00000513507 RTFDC1Q9BY42 306 aaPredicted RBP20.17■□□□□ 0.82
APBB3-220ENST00000513507 MRS2Q9HD23 443 aa20.17■□□□□ 0.82
APBB3-220ENST00000513507 ZNF277Q9NRM2 450 aaPredicted RBP20.17■□□□□ 0.82
APBB3-220ENST00000513507 ATP6V0A2Q9Y487 856 aa20.17■□□□□ 0.82
APBB3-220ENST00000513507 COL4A5P29400 1685 aa20.16■□□□□ 0.82
APBB3-220ENST00000513507 PPEF1O14829 653 aaPredicted RBP20.16■□□□□ 0.82
APBB3-220ENST00000513507 DDNO94850 711 aaPredicted RBP20.16■□□□□ 0.82
APBB3-220ENST00000513507 SF3B3Q15393 1217 aaKnown RBP20.16■□□□□ 0.82
APBB3-220ENST00000513507 TSPYL6Q8N831 410 aa20.16■□□□□ 0.82
APBB3-220ENST00000513507 PHAXQ9H814 394 aaKnown RBP20.16■□□□□ 0.82
APBB3-220ENST00000513507 ABCC4O15439 1325 aa20.16■□□□□ 0.82
APBB3-220ENST00000513507 CCDC30Q5VVM6 783 aa20.15■□□□□ 0.82
APBB3-220ENST00000513507 WDR63Q8IWG1 891 aa20.15■□□□□ 0.82
APBB3-220ENST00000513507 SP8Q8IXZ3 490 aa20.15■□□□□ 0.82
APBB3-220ENST00000513507 ADAMTSL1Q8N6G6 1762 aa20.15■□□□□ 0.82
APBB3-220ENST00000513507 ELL2O00472 640 aaPredicted RBP20.14■□□□□ 0.81
APBB3-220ENST00000513507 HCLS1P14317 486 aaPredicted RBP20.14■□□□□ 0.81
APBB3-220ENST00000513507 TMC4Q7Z404 712 aa20.13■□□□□ 0.81
APBB3-220ENST00000513507 ZNF541Q9H0D2 1346 aa20.11■□□□□ 0.81
APBB3-220ENST00000513507 IQCA1LA6NCM1 817 aa20.11■□□□□ 0.81
APBB3-220ENST00000513507 ATP5J2-PTCD1G3V325 749 aa20.11■□□□□ 0.81
APBB3-220ENST00000513507 GOLGA2Q08379 1002 aa20.11■□□□□ 0.81
APBB3-220ENST00000513507 GRAPQ13588 217 aa20.11■□□□□ 0.81
APBB3-220ENST00000513507 SLC51AQ86UW1 340 aa20.11■□□□□ 0.81
APBB3-220ENST00000513507 GPC2Q8N158 579 aa20.11■□□□□ 0.81
APBB3-220ENST00000513507 ZBTB38Q8NAP3 1195 aaPredicted RBP20.11■□□□□ 0.81
APBB3-220ENST00000513507 CCDC191Q8NCU4 936 aa20.11■□□□□ 0.81
APBB3-220ENST00000513507 GRAPLQ8TC17 118 aaPredicted RBP20.11■□□□□ 0.81
APBB3-220ENST00000513507 TSR2Q969E8 191 aaKnown RBP20.11■□□□□ 0.81
APBB3-220ENST00000513507 FAM89AQ96GI7 184 aa20.11■□□□□ 0.81
APBB3-220ENST00000513507 METTL22Q9BUU2 404 aaPredicted RBP20.11■□□□□ 0.81
APBB3-220ENST00000513507 LTBP1Q14766 1721 aa20.1■□□□□ 0.81
APBB3-220ENST00000513507 DDX46Q7L014 1031 aaKnown RBP20.1■□□□□ 0.81
APBB3-220ENST00000513507 RIC3Q7Z5B4 369 aa20.1■□□□□ 0.81
APBB3-220ENST00000513507 PCCAP05165 728 aaPredicted RBP20.09■□□□□ 0.81
APBB3-220ENST00000513507 JDP2Q8WYK2 163 aa20.09■□□□□ 0.81
APBB3-220ENST00000513507 TAF1DQ9H5J8 278 aaPredicted RBP20.09■□□□□ 0.81
APBB3-220ENST00000513507 DUOX1Q9NRD9 1551 aa20.08■□□□□ 0.81
APBB3-220ENST00000513507 COL4A1P02462 1669 aa20.08■□□□□ 0.81
APBB3-220ENST00000513507 DDX58O95786 925 aaKnown RBP20.08■□□□□ 0.81
APBB3-220ENST00000513507 TWISTNBQ3B726 338 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms