RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 POLR3GLQ9BT43 218 aa9.87□□□□□ -0.83
USP46-208ENST00000512656 RGPD2P0DJD1 1756 aa9.87□□□□□ -0.83
USP46-208ENST00000512656 UTRNP46939 3433 aa9.87□□□□□ -0.83
USP46-208ENST00000512656 QSER1Q2KHR3 1735 aa9.87□□□□□ -0.83
USP46-208ENST00000512656 PALLDQ8WX93 1383 aa9.86□□□□□ -0.83
USP46-208ENST00000512656 LY75O60449 1722 aa9.85□□□□□ -0.83
USP46-208ENST00000512656 SHANK3Q9BYB0 1731 aa9.85□□□□□ -0.83
USP46-208ENST00000512656 COL23A1Q86Y22 540 aaPredicted RBP9.85□□□□□ -0.83
USP46-208ENST00000512656 POLKQ9UBT6 870 aa9.85□□□□□ -0.83
USP46-208ENST00000512656 PLEKHG2Q9H7P9 1386 aa9.85□□□□□ -0.83
USP46-208ENST00000512656 NCAPD2Q15021 1401 aa9.84□□□□□ -0.83
USP46-208ENST00000512656 GFRA3O60609 400 aa9.84□□□□□ -0.83
USP46-208ENST00000512656 ADH1BP00325 375 aa9.84□□□□□ -0.83
USP46-208ENST00000512656 Q6ZNB5 142 aa9.84□□□□□ -0.83
USP46-208ENST00000512656 IFNL2Q8IZJ0 200 aa9.84□□□□□ -0.83
USP46-208ENST00000512656 ANKLE1Q8NAG6 615 aa9.84□□□□□ -0.83
USP46-208ENST00000512656 ZNF784Q8NCA9 323 aaPredicted RBP9.84□□□□□ -0.83
USP46-208ENST00000512656 AK7Q96M32 723 aa9.84□□□□□ -0.83
USP46-208ENST00000512656 TMOD3Q9NYL9 352 aa9.84□□□□□ -0.83
USP46-208ENST00000512656 RNF223E7ERA6 249 aa9.83□□□□□ -0.84
USP46-208ENST00000512656 NRG2O14511 850 aaPredicted RBP9.83□□□□□ -0.84
USP46-208ENST00000512656 GRIN3BO60391 1043 aa9.83□□□□□ -0.84
USP46-208ENST00000512656 MAP2K5Q13163 448 aa9.83□□□□□ -0.84
USP46-208ENST00000512656 SCUBE3Q8IX30 993 aa9.83□□□□□ -0.84
USP46-208ENST00000512656 PIGBQ92521 554 aa9.83□□□□□ -0.84
USP46-208ENST00000512656 GOLGB1Q14789 3259 aaKnown RBP9.83□□□□□ -0.84
USP46-208ENST00000512656 TLL1O43897 1013 aa9.82□□□□□ -0.84
USP46-208ENST00000512656 HSP90AB1P08238 724 aaKnown RBP9.82□□□□□ -0.84
USP46-208ENST00000512656 HSPA5P11021 654 aaKnown RBP9.82□□□□□ -0.84
USP46-208ENST00000512656 TNNT2P45379 298 aaPredicted RBP9.82□□□□□ -0.84
USP46-208ENST00000512656 EIF4A2Q14240 407 aaKnown RBP9.82□□□□□ -0.84
USP46-208ENST00000512656 MSL1Q68DK7 614 aa9.82□□□□□ -0.84
USP46-208ENST00000512656 RDH13Q8NBN7 331 aa9.82□□□□□ -0.84
USP46-208ENST00000512656 CCER1Q8TC90 406 aaPredicted RBP9.82□□□□□ -0.84
USP46-208ENST00000512656 PHOX2BQ99453 314 aa9.82□□□□□ -0.84
USP46-208ENST00000512656 PANK3Q9H999 370 aa9.82□□□□□ -0.84
USP46-208ENST00000512656 LOC102724428A0A0B4J2F2 783 aa9.81□□□□□ -0.84
USP46-208ENST00000512656 PHKG2P15735 406 aa9.81□□□□□ -0.84
USP46-208ENST00000512656 SIK1P57059 783 aa9.81□□□□□ -0.84
USP46-208ENST00000512656 NLGN2Q8NFZ4 835 aa9.81□□□□□ -0.84
USP46-208ENST00000512656 CD2APQ9Y5K6 639 aa9.81□□□□□ -0.84
USP46-208ENST00000512656 COL24A1Q17RW2 1714 aa9.81□□□□□ -0.84
USP46-208ENST00000512656 PKD1L3Q7Z443 1732 aa9.81□□□□□ -0.84
USP46-208ENST00000512656 ANKRD26Q9UPS8 1709 aa9.81□□□□□ -0.84
USP46-208ENST00000512656 TUBGCP6Q96RT7 1819 aa9.8□□□□□ -0.84
USP46-208ENST00000512656 DDX11L8A8MPP1 907 aa9.8□□□□□ -0.84
USP46-208ENST00000512656 ERVV-2B6SEH9 535 aa9.8□□□□□ -0.84
USP46-208ENST00000512656 SSFA2P28290 1259 aa9.8□□□□□ -0.84
USP46-208ENST00000512656 GCGRP47871 477 aa9.8□□□□□ -0.84
USP46-208ENST00000512656 PLEKHO1Q53GL0 409 aaPredicted RBP9.8□□□□□ -0.84
USP46-208ENST00000512656 MORC1Q86VD1 984 aa9.8□□□□□ -0.84
USP46-208ENST00000512656 KNSTRNQ9Y448 316 aa9.8□□□□□ -0.84
USP46-208ENST00000512656 C5P01031 1676 aa9.8□□□□□ -0.84
USP46-208ENST00000512656 CHD4Q14839 1912 aa9.8□□□□□ -0.84
USP46-208ENST00000512656 IGSF1Q8N6C5 1336 aa9.8□□□□□ -0.84
USP46-208ENST00000512656 MAP2P11137 1827 aaKnown RBP9.79□□□□□ -0.84
USP46-208ENST00000512656 S1PR4O95977 384 aa9.79□□□□□ -0.84
USP46-208ENST00000512656 ATP6V1AP38606 617 aa9.79□□□□□ -0.84
USP46-208ENST00000512656 AMOTQ4VCS5 1084 aa9.79□□□□□ -0.84
USP46-208ENST00000512656 MORN1Q5T089 497 aa9.79□□□□□ -0.84
USP46-208ENST00000512656 DCAF5Q96JK2 942 aa9.79□□□□□ -0.84
USP46-208ENST00000512656 SLC6A16Q9GZN6 736 aa9.79□□□□□ -0.84
USP46-208ENST00000512656 ASAP1Q9ULH1 1129 aa9.79□□□□□ -0.84
USP46-208ENST00000512656 SALL2Q9Y467 1007 aaPredicted RBP9.79□□□□□ -0.84
USP46-208ENST00000512656 SLC19A1P41440 591 aa9.78□□□□□ -0.84
USP46-208ENST00000512656 SPSB2Q99619 263 aa9.78□□□□□ -0.84
USP46-208ENST00000512656 ATG3Q9NT62 314 aa9.78□□□□□ -0.84
USP46-208ENST00000512656 C4BP0C0L5 1744 aa9.78□□□□□ -0.84
USP46-208ENST00000512656 ITGB4P16144 1822 aa9.77□□□□□ -0.84
USP46-208ENST00000512656 TOGARAM1Q9Y4F4 1720 aa9.77□□□□□ -0.85
USP46-208ENST00000512656 IRF6O14896 467 aa9.77□□□□□ -0.85
USP46-208ENST00000512656 FUT2Q10981 343 aa9.77□□□□□ -0.85
USP46-208ENST00000512656 C1orf141Q5JVX7 400 aa9.77□□□□□ -0.85
USP46-208ENST00000512656 ZNF530Q6P9A1 599 aaPredicted RBP9.77□□□□□ -0.85
USP46-208ENST00000512656 LINC00116Q8NCU8 138 aa9.77□□□□□ -0.85
USP46-208ENST00000512656 GIGYF1O75420 1035 aaPredicted RBP9.76□□□□□ -0.85
USP46-208ENST00000512656 YBX3P16989 372 aaKnown RBP eCLIP9.76□□□□□ -0.85
USP46-208ENST00000512656 CABP4P57796 275 aa9.76□□□□□ -0.85
USP46-208ENST00000512656 C1QTNF8P60827 252 aa9.76□□□□□ -0.85
USP46-208ENST00000512656 ITPK1Q13572 414 aa9.76□□□□□ -0.85
USP46-208ENST00000512656 PUS10Q3MIT2 529 aaKnown RBP9.76□□□□□ -0.85
USP46-208ENST00000512656 GRIPAP1Q4V328 841 aa9.76□□□□□ -0.85
USP46-208ENST00000512656 PDZRN3Q9UPQ7 1066 aa9.76□□□□□ -0.85
USP46-208ENST00000512656 RTCBQ9Y3I0 505 aaKnown RBP9.76□□□□□ -0.85
USP46-208ENST00000512656 TAF1LQ8IZX4 1826 aa9.76□□□□□ -0.85
USP46-208ENST00000512656 MTHFSP49914 203 aa9.75□□□□□ -0.85
USP46-208ENST00000512656 TRAPPC3LQ5T215 181 aa9.75□□□□□ -0.85
USP46-208ENST00000512656 RC3H1Q5TC82 1133 aaKnown RBP9.75□□□□□ -0.85
USP46-208ENST00000512656 SPRYD7Q5W111 196 aa9.75□□□□□ -0.85
USP46-208ENST00000512656 AMIGO3Q86WK7 504 aa9.75□□□□□ -0.85
USP46-208ENST00000512656 NLGN1Q8N2Q7 840 aa9.75□□□□□ -0.85
USP46-208ENST00000512656 NLRP7Q8WX94 980 aa9.75□□□□□ -0.85
USP46-208ENST00000512656 SULT6B1Q6IMI4 303 aa9.74□□□□□ -0.85
USP46-208ENST00000512656 TRAF7Q6Q0C0 670 aa9.74□□□□□ -0.85
USP46-208ENST00000512656 ZNF598Q86UK7 904 aaKnown RBP9.74□□□□□ -0.85
USP46-208ENST00000512656 EMID1Q96A84 441 aaPredicted RBP9.74□□□□□ -0.85
USP46-208ENST00000512656 THAP11Q96EK4 314 aa9.74□□□□□ -0.85
USP46-208ENST00000512656 UBR3Q6ZT12 1888 aa9.73□□□□□ -0.85
USP46-208ENST00000512656 SENP3-EIF4A1A0A087X0R7 540 aa9.73□□□□□ -0.85
USP46-208ENST00000512656 FMNL1O95466 1100 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms