RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 HOXA10P31260 410 aaPredicted RBP19.99■□□□□ 0.79
COL1A1-213ENST00000511732 HTRA3P83110 453 aa19.99■□□□□ 0.79
COL1A1-213ENST00000511732 CCDC184Q52MB2 194 aa19.99■□□□□ 0.79
COL1A1-213ENST00000511732 SLC51AQ86UW1 340 aa19.99■□□□□ 0.79
COL1A1-213ENST00000511732 DNAJC5GQ8N7S2 189 aa19.99■□□□□ 0.79
COL1A1-213ENST00000511732 CFAP44Q96MT7 982 aa19.99■□□□□ 0.79
COL1A1-213ENST00000511732 DDX21Q9NR30 783 aaKnown RBP eCLIP19.99■□□□□ 0.79
COL1A1-213ENST00000511732 ZNF277Q9NRM2 450 aaPredicted RBP19.99■□□□□ 0.79
COL1A1-213ENST00000511732 CHPF2Q9P2E5 772 aa19.99■□□□□ 0.79
COL1A1-213ENST00000511732 PARP10Q53GL7 1025 aa19.98■□□□□ 0.79
COL1A1-213ENST00000511732 PPP1R42Q7Z4L9 355 aa19.98■□□□□ 0.79
COL1A1-213ENST00000511732 SMC1BQ8NDV3 1235 aa19.98■□□□□ 0.79
COL1A1-213ENST00000511732 ZNF853P0CG23 659 aa19.97■□□□□ 0.79
COL1A1-213ENST00000511732 RTKN2Q8IZC4 609 aa19.97■□□□□ 0.79
COL1A1-213ENST00000511732 RPGRQ92834 1020 aaKnown RBP19.97■□□□□ 0.79
COL1A1-213ENST00000511732 MBIPQ9NS73 344 aa19.97■□□□□ 0.79
COL1A1-213ENST00000511732 LAMB2P55268 1798 aa19.96■□□□□ 0.79
COL1A1-213ENST00000511732 SLC10A5Q5PT55 438 aa19.96■□□□□ 0.79
COL1A1-213ENST00000511732 HDGFL1Q5TGJ6 251 aa19.96■□□□□ 0.79
COL1A1-213ENST00000511732 SYNE4Q8N205 404 aa19.96■□□□□ 0.79
COL1A1-213ENST00000511732 UTP14AQ9BVJ6 771 aaKnown RBP19.96■□□□□ 0.79
COL1A1-213ENST00000511732 HOXB7P09629 217 aa19.95■□□□□ 0.78
COL1A1-213ENST00000511732 TCIRG1Q13488 830 aa19.95■□□□□ 0.78
COL1A1-213ENST00000511732 DUSP27Q5VZP5 1158 aa19.95■□□□□ 0.78
COL1A1-213ENST00000511732 NLRP10Q86W26 655 aa19.95■□□□□ 0.78
COL1A1-213ENST00000511732 IARSP41252 1262 aaKnown RBP19.94■□□□□ 0.78
COL1A1-213ENST00000511732 HSP90AB3PQ58FF7 597 aa19.94■□□□□ 0.78
COL1A1-213ENST00000511732 NLRP3Q96P20 1036 aa19.94■□□□□ 0.78
COL1A1-213ENST00000511732 CRAMP1Q96RY5 1269 aa19.94■□□□□ 0.78
COL1A1-213ENST00000511732 ZNF541Q9H0D2 1346 aa19.94■□□□□ 0.78
COL1A1-213ENST00000511732 ZNF428Q96B54 188 aa19.93■□□□□ 0.78
COL1A1-213ENST00000511732 RBM17Q96I25 401 aaKnown RBP19.93■□□□□ 0.78
COL1A1-213ENST00000511732 COL4A5P29400 1685 aa19.93■□□□□ 0.78
COL1A1-213ENST00000511732 TCERG1O14776 1098 aaKnown RBP19.92■□□□□ 0.78
COL1A1-213ENST00000511732 POTEIP0CG38 1075 aa19.92■□□□□ 0.78
COL1A1-213ENST00000511732 POTEJP0CG39 1038 aa19.92■□□□□ 0.78
COL1A1-213ENST00000511732 CC2D2BQ6DHV5 1058 aa19.92■□□□□ 0.78
COL1A1-213ENST00000511732 PSMD1Q99460 953 aa19.92■□□□□ 0.78
COL1A1-213ENST00000511732 IFT57Q9NWB7 429 aa19.92■□□□□ 0.78
COL1A1-213ENST00000511732 DBF4Q9UBU7 674 aaPredicted RBP19.92■□□□□ 0.78
COL1A1-213ENST00000511732 SCN4AP35499 1836 aa19.91■□□□□ 0.78
COL1A1-213ENST00000511732 PPEF1O14829 653 aaPredicted RBP19.91■□□□□ 0.78
COL1A1-213ENST00000511732 HCLS1P14317 486 aaPredicted RBP19.91■□□□□ 0.78
COL1A1-213ENST00000511732 ANKRD13DQ6ZTN6 518 aa19.91■□□□□ 0.78
COL1A1-213ENST00000511732 PLBD2Q8NHP8 589 aa19.91■□□□□ 0.78
COL1A1-213ENST00000511732 FZD9O00144 591 aa19.9■□□□□ 0.78
COL1A1-213ENST00000511732 ZEB1P37275 1124 aaPredicted RBP19.9■□□□□ 0.78
COL1A1-213ENST00000511732 L3MBTL3Q96JM7 780 aaPredicted RBP19.9■□□□□ 0.78
COL1A1-213ENST00000511732 TRMT112Q9UI30 125 aaKnown RBP19.9■□□□□ 0.78
COL1A1-213ENST00000511732 ABCC4O15439 1325 aa19.9■□□□□ 0.78
COL1A1-213ENST00000511732 RNF123Q5XPI4 1314 aa19.9■□□□□ 0.78
COL1A1-213ENST00000511732 DDX60Q8IY21 1712 aaKnown RBP19.9■□□□□ 0.78
COL1A1-213ENST00000511732 TAF1P21675 1872 aa19.9■□□□□ 0.78
COL1A1-213ENST00000511732 ELL2O00472 640 aaPredicted RBP19.89■□□□□ 0.77
COL1A1-213ENST00000511732 GNAI1P63096 354 aa19.89■□□□□ 0.77
COL1A1-213ENST00000511732 ISCA1Q9BUE6 129 aa19.89■□□□□ 0.77
COL1A1-213ENST00000511732 SH3TC1Q8TE82 1336 aa19.88■□□□□ 0.77
COL1A1-213ENST00000511732 C8orf58Q8NAV2 365 aa19.88■□□□□ 0.77
COL1A1-213ENST00000511732 KLRG1Q96E93 195 aa19.88■□□□□ 0.77
COL1A1-213ENST00000511732 HYPKQ9NX55 129 aa19.88■□□□□ 0.77
COL1A1-213ENST00000511732 ATP5J2-PTCD1G3V325 749 aa19.87■□□□□ 0.77
COL1A1-213ENST00000511732 CALD1Q05682 793 aaKnown RBP19.87■□□□□ 0.77
COL1A1-213ENST00000511732 TAF1DQ9H5J8 278 aaPredicted RBP19.87■□□□□ 0.77
COL1A1-213ENST00000511732 PHAXQ9H814 394 aaKnown RBP19.87■□□□□ 0.77
COL1A1-213ENST00000511732 ATP6V0A2Q9Y487 856 aa19.87■□□□□ 0.77
COL1A1-213ENST00000511732 IQCA1LA6NCM1 817 aa19.86■□□□□ 0.77
COL1A1-213ENST00000511732 GRIPAP1Q4V328 841 aa19.86■□□□□ 0.77
COL1A1-213ENST00000511732 CHADLQ6NUI6 762 aa19.86■□□□□ 0.77
COL1A1-213ENST00000511732 JDP2Q8WYK2 163 aa19.85■□□□□ 0.77
COL1A1-213ENST00000511732 ZNF316A6NFI3 1004 aaPredicted RBP19.84■□□□□ 0.77
COL1A1-213ENST00000511732 TSPYL6Q8N831 410 aa19.84■□□□□ 0.77
COL1A1-213ENST00000511732 FAM89AQ96GI7 184 aa19.84■□□□□ 0.77
COL1A1-213ENST00000511732 ADAMTSL1Q8N6G6 1762 aa19.84■□□□□ 0.77
COL1A1-213ENST00000511732 LTBP1Q14766 1721 aa19.84■□□□□ 0.77
COL1A1-213ENST00000511732 COL4A1P02462 1669 aa19.84■□□□□ 0.77
COL1A1-213ENST00000511732 BBOX1O75936 387 aa19.83■□□□□ 0.77
COL1A1-213ENST00000511732 SP8Q8IXZ3 490 aa19.83■□□□□ 0.77
COL1A1-213ENST00000511732 GPC2Q8N158 579 aa19.83■□□□□ 0.77
COL1A1-213ENST00000511732 LARGE2Q8N3Y3 721 aa19.83■□□□□ 0.77
COL1A1-213ENST00000511732 JMYQ8N9B5 988 aa19.83■□□□□ 0.77
COL1A1-213ENST00000511732 HACL1Q9UJ83 578 aa19.83■□□□□ 0.77
COL1A1-213ENST00000511732 TRIM28Q13263 835 aaKnown RBP19.82■□□□□ 0.76
COL1A1-213ENST00000511732 GRAPQ13588 217 aa19.82■□□□□ 0.76
COL1A1-213ENST00000511732 RTL5Q5HYW3 569 aaPredicted RBP19.82■□□□□ 0.76
COL1A1-213ENST00000511732 DDX46Q7L014 1031 aaKnown RBP19.82■□□□□ 0.76
COL1A1-213ENST00000511732 LDHDQ86WU2 507 aa19.82■□□□□ 0.76
COL1A1-213ENST00000511732 GRAPLQ8TC17 118 aaPredicted RBP19.82■□□□□ 0.76
COL1A1-213ENST00000511732 TSR2Q969E8 191 aaKnown RBP19.82■□□□□ 0.76
COL1A1-213ENST00000511732 EPHX2P34913 555 aa19.81■□□□□ 0.76
COL1A1-213ENST00000511732 EIF6P56537 245 aaKnown RBP19.81■□□□□ 0.76
COL1A1-213ENST00000511732 AOC3Q16853 763 aa19.81■□□□□ 0.76
COL1A1-213ENST00000511732 CCDC27Q2M243 656 aa19.81■□□□□ 0.76
COL1A1-213ENST00000511732 RIC3Q7Z5B4 369 aa19.81■□□□□ 0.76
COL1A1-213ENST00000511732 WWC1Q8IX03 1113 aa19.81■□□□□ 0.76
COL1A1-213ENST00000511732 RTFDC1Q9BY42 306 aaPredicted RBP19.81■□□□□ 0.76
COL1A1-213ENST00000511732 GJA3Q9Y6H8 435 aa19.81■□□□□ 0.76
COL1A1-213ENST00000511732 LRRC37AA6NMS7 1700 aa19.8■□□□□ 0.76
COL1A1-213ENST00000511732 PPIP5K2O43314 1243 aa19.8■□□□□ 0.76
COL1A1-213ENST00000511732 SF3B3Q15393 1217 aaKnown RBP19.8■□□□□ 0.76
COL1A1-213ENST00000511732 EAPPQ56P03 285 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms