RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, human

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2J3-215	ENST00000511313	SURF6	O75683	361 aa	Known RBP	11.68	□□□□□ -0.54
POLR2J3-215	ENST00000511313	GNL2	Q13823	731 aa	Known RBP	11.68	□□□□□ -0.54
POLR2J3-215	ENST00000511313	CNTROB	Q8N137	903 aa		11.68	□□□□□ -0.54
POLR2J3-215	ENST00000511313	LRRCC1	Q9C099	1032 aa		11.68	□□□□□ -0.54
POLR2J3-215	ENST00000511313	DENND2A	Q9ULE3	1009 aa		11.68	□□□□□ -0.54
POLR2J3-215	ENST00000511313	KNDC1	Q76NI1	1749 aa		11.67	□□□□□ -0.54
POLR2J3-215	ENST00000511313	MAP4K4	O95819	1239 aa	Predicted RBP	11.67	□□□□□ -0.54
POLR2J3-215	ENST00000511313	ATRN	O75882	1429 aa		11.67	□□□□□ -0.54
POLR2J3-215	ENST00000511313	GJA3	Q9Y6H8	435 aa		11.67	□□□□□ -0.54
POLR2J3-215	ENST00000511313	PPP1R12B	O60237	982 aa	Predicted RBP	11.67	□□□□□ -0.54
POLR2J3-215	ENST00000511313	ZRSR1	Q15695	479 aa	Known RBP	11.67	□□□□□ -0.54
POLR2J3-215	ENST00000511313	RALYL	Q86SE5	291 aa	Known RBP	11.67	□□□□□ -0.54
POLR2J3-215	ENST00000511313	LRRFIP2	Q9Y608	721 aa	Known RBP	11.67	□□□□□ -0.54
POLR2J3-215	ENST00000511313	XBP1	P17861	261 aa		11.66	□□□□□ -0.54
POLR2J3-215	ENST00000511313	ANP32E	Q9BTT0	268 aa		11.66	□□□□□ -0.54
POLR2J3-215	ENST00000511313	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.66	□□□□□ -0.54
POLR2J3-215	ENST00000511313	MAP3K2	Q9Y2U5	619 aa		11.66	□□□□□ -0.54
POLR2J3-215	ENST00000511313	NT5C2	P49902	561 aa		11.66	□□□□□ -0.54
POLR2J3-215	ENST00000511313	METTL22	Q9BUU2	404 aa	Predicted RBP	11.66	□□□□□ -0.54
POLR2J3-215	ENST00000511313	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.66	□□□□□ -0.54
POLR2J3-215	ENST00000511313	MARCH6	O60337	910 aa		11.66	□□□□□ -0.54
POLR2J3-215	ENST00000511313	COL14A1	Q05707	1796 aa	Known RBP	11.66	□□□□□ -0.54
POLR2J3-215	ENST00000511313	KIF1BP	Q96EK5	621 aa		11.66	□□□□□ -0.54
POLR2J3-215	ENST00000511313	MROH5	Q6ZUA9	1318 aa		11.65	□□□□□ -0.54
POLR2J3-215	ENST00000511313	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.65	□□□□□ -0.54
POLR2J3-215	ENST00000511313	CARD14	Q9BXL6	1004 aa		11.65	□□□□□ -0.54
POLR2J3-215	ENST00000511313	RNF41	Q9H4P4	317 aa	Predicted RBP	11.65	□□□□□ -0.54
POLR2J3-215	ENST00000511313	AS3MT	Q9HBK9	375 aa		11.65	□□□□□ -0.54
POLR2J3-215	ENST00000511313	SEMA3E	O15041	775 aa		11.65	□□□□□ -0.54
POLR2J3-215	ENST00000511313	ZFY	P08048	801 aa	Predicted RBP	11.65	□□□□□ -0.54
POLR2J3-215	ENST00000511313	SLC39A6	Q13433	755 aa		11.65	□□□□□ -0.54
POLR2J3-215	ENST00000511313	FANCI	Q9NVI1	1328 aa		11.65	□□□□□ -0.54
POLR2J3-215	ENST00000511313	PPEF1	O14829	653 aa	Predicted RBP	11.65	□□□□□ -0.54
POLR2J3-215	ENST00000511313	USP48	Q86UV5	1035 aa		11.65	□□□□□ -0.54
POLR2J3-215	ENST00000511313	C2orf69	Q8N8R5	385 aa		11.65	□□□□□ -0.54
POLR2J3-215	ENST00000511313	USPL1	Q5W0Q7	1092 aa		11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	REM2	Q8IYK8	340 aa	Predicted RBP	11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	MED1	Q15648	1581 aa	Predicted RBP	11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	ZBTB7A	O95365	584 aa		11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	USP5	P45974	858 aa		11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	RPS8	P62241	208 aa	Known RBP	11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	EZH2	Q15910	746 aa	Known RBP	11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	PIGB	Q92521	554 aa		11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	CSAD	Q9Y600	493 aa		11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	UFL1	O94874	794 aa		11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	REC8	O95072	547 aa		11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	CIAPIN1	Q6FI81	312 aa		11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	PCCA	P05165	728 aa	Predicted RBP	11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	ANP32A	P39687	249 aa	Known RBP	11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	CHAF1A	Q13111	956 aa	Predicted RBP	11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	IK	Q13123	557 aa	Predicted RBP	11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.64	□□□□□ -0.55
POLR2J3-215	ENST00000511313	POTEA	Q6S8J7	498 aa		11.63	□□□□□ -0.55
POLR2J3-215	ENST00000511313	GRM8	O00222	908 aa		11.63	□□□□□ -0.55
POLR2J3-215	ENST00000511313	TCERG1	O14776	1098 aa	Known RBP	11.63	□□□□□ -0.55
POLR2J3-215	ENST00000511313	DLGAP5	Q15398	846 aa		11.63	□□□□□ -0.55
POLR2J3-215	ENST00000511313	WWC2	Q6AWC2	1192 aa		11.63	□□□□□ -0.55
POLR2J3-215	ENST00000511313	PICK1	Q9NRD5	415 aa		11.63	□□□□□ -0.55
POLR2J3-215	ENST00000511313	XDH	P47989	1333 aa		11.63	□□□□□ -0.55
POLR2J3-215	ENST00000511313	RPS12	P25398	132 aa	Known RBP	11.63	□□□□□ -0.55
POLR2J3-215	ENST00000511313	PSD	A5PKW4	1024 aa	Predicted RBP	11.63	□□□□□ -0.55
POLR2J3-215	ENST00000511313	POLR3D	P05423	398 aa	Predicted RBP	11.63	□□□□□ -0.55
POLR2J3-215	ENST00000511313	MARCH10	Q8NA82	808 aa	Predicted RBP	11.63	□□□□□ -0.55
POLR2J3-215	ENST00000511313	CRAMP1	Q96RY5	1269 aa		11.63	□□□□□ -0.55
POLR2J3-215	ENST00000511313	DHX16	O60231	1041 aa	Known RBP	11.62	□□□□□ -0.55
POLR2J3-215	ENST00000511313	GIGYF1	O75420	1035 aa	Predicted RBP	11.62	□□□□□ -0.55
POLR2J3-215	ENST00000511313	TTC6	Q86TZ1	520 aa		11.62	□□□□□ -0.55
POLR2J3-215	ENST00000511313	AEBP1	Q8IUX7	1158 aa		11.62	□□□□□ -0.55
POLR2J3-215	ENST00000511313	BRMS1	Q9HCU9	246 aa		11.62	□□□□□ -0.55
POLR2J3-215	ENST00000511313	COL15A1	P39059	1388 aa		11.62	□□□□□ -0.55
POLR2J3-215	ENST00000511313	ZNF496	Q96IT1	587 aa	Predicted RBP	11.62	□□□□□ -0.55
POLR2J3-215	ENST00000511313	ROBO1	Q9Y6N7	1651 aa		11.62	□□□□□ -0.55
POLR2J3-215	ENST00000511313	SRGAP3	O43295	1099 aa		11.61	□□□□□ -0.55
POLR2J3-215	ENST00000511313	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.61	□□□□□ -0.55
POLR2J3-215	ENST00000511313	YY1	P25490	414 aa		11.61	□□□□□ -0.55
POLR2J3-215	ENST00000511313	RNF181	Q9P0P0	153 aa		11.61	□□□□□ -0.55
POLR2J3-215	ENST00000511313	CHL1	O00533	1208 aa		11.61	□□□□□ -0.55
POLR2J3-215	ENST00000511313	GNAT2	P19087	354 aa		11.61	□□□□□ -0.55
POLR2J3-215	ENST00000511313	ERFE	Q4G0M1	354 aa		11.61	□□□□□ -0.55
POLR2J3-215	ENST00000511313	EAPP	Q56P03	285 aa	Predicted RBP	11.61	□□□□□ -0.55
POLR2J3-215	ENST00000511313	MSL1	Q68DK7	614 aa		11.61	□□□□□ -0.55
POLR2J3-215	ENST00000511313	PPP4R2	Q9NY27	417 aa		11.61	□□□□□ -0.55
POLR2J3-215	ENST00000511313	TMOD4	Q9NZQ9	345 aa		11.61	□□□□□ -0.55
POLR2J3-215	ENST00000511313	COL5A2	P05997	1499 aa	Predicted RBP	11.61	□□□□□ -0.55
POLR2J3-215	ENST00000511313	GOLGA6L22	H0YM25	854 aa		11.61	□□□□□ -0.55
POLR2J3-215	ENST00000511313	LMNB1	P20700	586 aa		11.61	□□□□□ -0.55
POLR2J3-215	ENST00000511313	HOXD10	P28358	340 aa		11.61	□□□□□ -0.55
POLR2J3-215	ENST00000511313	FEZ1	Q99689	392 aa		11.61	□□□□□ -0.55
POLR2J3-215	ENST00000511313	GTF3C3	Q9Y5Q9	886 aa		11.61	□□□□□ -0.55
POLR2J3-215	ENST00000511313	ADGRB1	O14514	1584 aa		11.6	□□□□□ -0.55
POLR2J3-215	ENST00000511313	LTBP4	Q8N2S1	1624 aa		11.6	□□□□□ -0.55
POLR2J3-215	ENST00000511313	ONECUT3	O60422	494 aa	Predicted RBP	11.6	□□□□□ -0.55
POLR2J3-215	ENST00000511313	PSMA5	P28066	241 aa		11.6	□□□□□ -0.55
POLR2J3-215	ENST00000511313	EIF4A1	P60842	406 aa	Known RBP	11.6	□□□□□ -0.55
POLR2J3-215	ENST00000511313	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.6	□□□□□ -0.55
POLR2J3-215	ENST00000511313	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.6	□□□□□ -0.55
POLR2J3-215	ENST00000511313	BRDT	Q58F21	947 aa	Predicted RBP	11.6	□□□□□ -0.55
POLR2J3-215	ENST00000511313	UBE3B	Q7Z3V4	1068 aa		11.6	□□□□□ -0.55

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