RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 ARHGEF40Q8TER5 1519 aa9.82□□□□□ -0.84
GYPB-212ENST00000511198 EML1O00423 815 aa9.82□□□□□ -0.84
GYPB-212ENST00000511198 C2CD2LO14523 706 aa9.82□□□□□ -0.84
GYPB-212ENST00000511198 NSFL1CQ9UNZ2 370 aaKnown RBP9.82□□□□□ -0.84
GYPB-212ENST00000511198 PHLDB1Q86UU1 1377 aa9.82□□□□□ -0.84
GYPB-212ENST00000511198 NCOA1Q15788 1441 aa9.82□□□□□ -0.84
GYPB-212ENST00000511198 SERTM1A2A2V5 107 aa9.81□□□□□ -0.84
GYPB-212ENST00000511198 C21orf2O43822 256 aa9.81□□□□□ -0.84
GYPB-212ENST00000511198 BCRP11274 1271 aa9.81□□□□□ -0.84
GYPB-212ENST00000511198 MAP2K3P46734 347 aa9.81□□□□□ -0.84
GYPB-212ENST00000511198 GSK3AP49840 483 aa9.81□□□□□ -0.84
GYPB-212ENST00000511198 SEC13P55735 322 aa9.81□□□□□ -0.84
GYPB-212ENST00000511198 CTBSQ01459 385 aa9.81□□□□□ -0.84
GYPB-212ENST00000511198 LARP1Q6PKG0 1096 aaKnown RBP9.81□□□□□ -0.84
GYPB-212ENST00000511198 KLRG1Q96E93 195 aa9.81□□□□□ -0.84
GYPB-212ENST00000511198 FANCAO15360 1455 aa9.8□□□□□ -0.84
GYPB-212ENST00000511198 ATXN7O15265 892 aaPredicted RBP9.8□□□□□ -0.84
GYPB-212ENST00000511198 FGFR3P22607 806 aa9.8□□□□□ -0.84
GYPB-212ENST00000511198 PSMA6P60900 246 aaKnown RBP9.8□□□□□ -0.84
GYPB-212ENST00000511198 MAP3K10Q02779 954 aa9.8□□□□□ -0.84
GYPB-212ENST00000511198 ZMYND15Q9H091 742 aa9.8□□□□□ -0.84
GYPB-212ENST00000511198 VRTNQ9H8Y1 702 aa9.8□□□□□ -0.84
GYPB-212ENST00000511198 ZNF232Q9UNY5 417 aa9.8□□□□□ -0.84
GYPB-212ENST00000511198 DISP1Q96F81 1524 aa9.8□□□□□ -0.84
GYPB-212ENST00000511198 FAM196BA6NMK8 535 aa9.79□□□□□ -0.84
GYPB-212ENST00000511198 USP17L15C9J2P7 530 aa9.79□□□□□ -0.84
GYPB-212ENST00000511198 USP17L10C9JJH3 530 aa9.79□□□□□ -0.84
GYPB-212ENST00000511198 USP17L13C9JLJ4 530 aa9.79□□□□□ -0.84
GYPB-212ENST00000511198 USP17L12C9JPN9 530 aa9.79□□□□□ -0.84
GYPB-212ENST00000511198 USP17L11C9JVI0 530 aa9.79□□□□□ -0.84
GYPB-212ENST00000511198 USP17L21D6R901 530 aa9.79□□□□□ -0.84
GYPB-212ENST00000511198 USP17L18D6R9N7 530 aa9.79□□□□□ -0.84
GYPB-212ENST00000511198 USP17L22D6RA61 530 aa9.79□□□□□ -0.84
GYPB-212ENST00000511198 USP17L17D6RBQ6 530 aa9.79□□□□□ -0.84
GYPB-212ENST00000511198 USP17L19D6RCP7 530 aa9.79□□□□□ -0.84
GYPB-212ENST00000511198 USP17L20D6RJB6 530 aa9.79□□□□□ -0.84
GYPB-212ENST00000511198 TOM1O60784 492 aa9.79□□□□□ -0.84
GYPB-212ENST00000511198 HIRAP54198 1017 aaPredicted RBP9.79□□□□□ -0.84
GYPB-212ENST00000511198 TNP2Q05952 138 aa9.79□□□□□ -0.84
GYPB-212ENST00000511198 USP17L24Q0WX57 530 aa9.79□□□□□ -0.84
GYPB-212ENST00000511198 OXCT2Q9BYC2 517 aaPredicted RBP9.79□□□□□ -0.84
GYPB-212ENST00000511198 LRRC4BQ9NT99 713 aa9.79□□□□□ -0.84
GYPB-212ENST00000511198 RBM19Q9Y4C8 960 aaKnown RBP9.79□□□□□ -0.84
GYPB-212ENST00000511198 SETD1BQ9UPS6 1966 aaKnown RBP9.79□□□□□ -0.84
GYPB-212ENST00000511198 KCNMA1Q12791 1236 aa9.78□□□□□ -0.84
GYPB-212ENST00000511198 DPYDQ12882 1025 aa9.78□□□□□ -0.84
GYPB-212ENST00000511198 BICDL1Q6ZP65 573 aa9.78□□□□□ -0.84
GYPB-212ENST00000511198 GTF3C3Q9Y5Q9 886 aa9.78□□□□□ -0.84
GYPB-212ENST00000511198 OIP5O43482 229 aa9.77□□□□□ -0.85
GYPB-212ENST00000511198 MAPTP10636 758 aaKnown RBP9.77□□□□□ -0.85
GYPB-212ENST00000511198 SAMD5Q5TGI4 173 aa9.77□□□□□ -0.85
GYPB-212ENST00000511198 C1orf229Q6ZS94 237 aaPredicted RBP9.77□□□□□ -0.85
GYPB-212ENST00000511198 ANKMY2Q8IV38 441 aa9.77□□□□□ -0.85
GYPB-212ENST00000511198 ARXQ96QS3 562 aa9.77□□□□□ -0.85
GYPB-212ENST00000511198 ALKQ9UM73 1620 aa9.77□□□□□ -0.85
GYPB-212ENST00000511198 ARHGEF12Q9NZN5 1544 aa9.77□□□□□ -0.85
GYPB-212ENST00000511198 ATAD2Q6PL18 1390 aa9.76□□□□□ -0.85
GYPB-212ENST00000511198 DCDC2BA2VCK2 349 aa9.76□□□□□ -0.85
GYPB-212ENST00000511198 FAM157BP0CG42 384 aa9.76□□□□□ -0.85
GYPB-212ENST00000511198 BMP4P12644 408 aa9.76□□□□□ -0.85
GYPB-212ENST00000511198 C1orf53Q5VUE5 145 aa9.76□□□□□ -0.85
GYPB-212ENST00000511198 ENAMQ9NRM1 1142 aa9.76□□□□□ -0.85
GYPB-212ENST00000511198 HCN4Q9Y3Q4 1203 aa9.76□□□□□ -0.85
GYPB-212ENST00000511198 AKNAQ7Z591 1439 aa9.75□□□□□ -0.85
GYPB-212ENST00000511198 NEO1Q92859 1461 aa9.75□□□□□ -0.85
GYPB-212ENST00000511198 KHNYNO15037 678 aaKnown RBP9.75□□□□□ -0.85
GYPB-212ENST00000511198 PPP1R12BO60237 982 aaPredicted RBP9.75□□□□□ -0.85
GYPB-212ENST00000511198 STAG2Q8N3U4 1231 aa9.75□□□□□ -0.85
GYPB-212ENST00000511198 GPC6Q9Y625 555 aaPredicted RBP9.75□□□□□ -0.85
GYPB-212ENST00000511198 GJA3Q9Y6H8 435 aa9.75□□□□□ -0.85
GYPB-212ENST00000511198 EFSO43281 561 aa9.74□□□□□ -0.85
GYPB-212ENST00000511198 CD33P20138 364 aa9.74□□□□□ -0.85
GYPB-212ENST00000511198 MARSP56192 900 aaKnown RBP9.74□□□□□ -0.85
GYPB-212ENST00000511198 FAM182BQ5T319 152 aa9.74□□□□□ -0.85
GYPB-212ENST00000511198 LRRC69Q6ZNQ3 347 aa9.74□□□□□ -0.85
GYPB-212ENST00000511198 GAS2L2Q8NHY3 880 aa9.74□□□□□ -0.85
GYPB-212ENST00000511198 SCG3Q8WXD2 468 aaKnown RBP9.74□□□□□ -0.85
GYPB-212ENST00000511198 C2orf49Q9BVC5 232 aaPredicted RBP9.74□□□□□ -0.85
GYPB-212ENST00000511198 PHACTR1Q9C0D0 580 aa9.74□□□□□ -0.85
GYPB-212ENST00000511198 STRN4Q9NRL3 753 aa9.74□□□□□ -0.85
GYPB-212ENST00000511198 GDF2Q9UK05 429 aaPredicted RBP9.74□□□□□ -0.85
GYPB-212ENST00000511198 LGR5O75473 907 aa9.73□□□□□ -0.85
GYPB-212ENST00000511198 RFX1P22670 979 aa9.73□□□□□ -0.85
GYPB-212ENST00000511198 CDCA8Q53HL2 280 aa9.73□□□□□ -0.85
GYPB-212ENST00000511198 RHPN1Q8TCX5 695 aa9.73□□□□□ -0.85
GYPB-212ENST00000511198 HINFPQ9BQA5 517 aa9.73□□□□□ -0.85
GYPB-212ENST00000511198 CHMP3Q9Y3E7 222 aa9.73□□□□□ -0.85
GYPB-212ENST00000511198 RICTORQ6R327 1708 aa9.73□□□□□ -0.85
GYPB-212ENST00000511198 BIVM-ERCC5R4GMW8 1640 aa9.72□□□□□ -0.85
GYPB-212ENST00000511198 SHISA8B8ZZ34 492 aa9.72□□□□□ -0.85
GYPB-212ENST00000511198 SRPK2P78362 688 aaKnown RBP9.72□□□□□ -0.85
GYPB-212ENST00000511198 GOLGA6L1Q8N7Z2 621 aa9.72□□□□□ -0.85
GYPB-212ENST00000511198 GALNT6Q8NCL4 622 aa9.72□□□□□ -0.85
GYPB-212ENST00000511198 GGA1Q9UJY5 639 aa9.72□□□□□ -0.85
GYPB-212ENST00000511198 CAMSAP1Q5T5Y3 1602 aa9.71□□□□□ -0.85
GYPB-212ENST00000511198 RNF225M0QZC1 329 aaPredicted RBP9.71□□□□□ -0.86
GYPB-212ENST00000511198 ARAFP10398 606 aa9.71□□□□□ -0.86
GYPB-212ENST00000511198 RASSF7Q02833 373 aa9.71□□□□□ -0.86
GYPB-212ENST00000511198 ALDH16A1Q8IZ83 802 aa9.71□□□□□ -0.86
GYPB-212ENST00000511198 NEDD1Q8NHV4 660 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms