RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 SBF2Q86WG5 1849 aa10.07□□□□□ -0.8
SMAD1-209ENST00000511125 ERBB4Q15303 1308 aa10.07□□□□□ -0.8
SMAD1-209ENST00000511125 SURF6O75683 361 aaKnown RBP10.06□□□□□ -0.8
SMAD1-209ENST00000511125 C16orf71Q8IYS4 520 aaPredicted RBP10.06□□□□□ -0.8
SMAD1-209ENST00000511125 KLHL34Q8N239 644 aa10.06□□□□□ -0.8
SMAD1-209ENST00000511125 IL1RAPL2Q9NP60 686 aa10.06□□□□□ -0.8
SMAD1-209ENST00000511125 SLC27A3Q5K4L6 730 aa10.06□□□□□ -0.8
SMAD1-209ENST00000511125 SETDB2Q96T68 719 aa10.06□□□□□ -0.8
SMAD1-209ENST00000511125 PPP1R1BQ9UD71 204 aaPredicted RBP10.06□□□□□ -0.8
SMAD1-209ENST00000511125 UBR2Q8IWV8 1755 aa10.06□□□□□ -0.8
SMAD1-209ENST00000511125 TSHZ3Q63HK5 1081 aa10.06□□□□□ -0.8
SMAD1-209ENST00000511125 NBPF5PQ86XG9 351 aaPredicted RBP10.06□□□□□ -0.8
SMAD1-209ENST00000511125 IRS4O14654 1257 aaPredicted RBP10.05□□□□□ -0.8
SMAD1-209ENST00000511125 ALDH1L1O75891 902 aa10.05□□□□□ -0.8
SMAD1-209ENST00000511125 ERFEQ4G0M1 354 aa10.05□□□□□ -0.8
SMAD1-209ENST00000511125 CNTNAP4Q9C0A0 1308 aa10.05□□□□□ -0.8
SMAD1-209ENST00000511125 SLC51AQ86UW1 340 aa10.05□□□□□ -0.8
SMAD1-209ENST00000511125 ISCA1Q9BUE6 129 aa10.05□□□□□ -0.8
SMAD1-209ENST00000511125 NARFQ9UHQ1 456 aa10.05□□□□□ -0.8
SMAD1-209ENST00000511125 PDZRN3Q9UPQ7 1066 aa10.05□□□□□ -0.8
SMAD1-209ENST00000511125 PAPPAQ13219 1627 aa10.05□□□□□ -0.8
SMAD1-209ENST00000511125 ZBTB7AO95365 584 aa10.04□□□□□ -0.8
SMAD1-209ENST00000511125 NFIXQ14938 502 aa10.04□□□□□ -0.8
SMAD1-209ENST00000511125 R3HDM1Q15032 1099 aaKnown RBP10.04□□□□□ -0.8
SMAD1-209ENST00000511125 CCDC191Q8NCU4 936 aa10.04□□□□□ -0.8
SMAD1-209ENST00000511125 STK32BQ9NY57 414 aa10.04□□□□□ -0.8
SMAD1-209ENST00000511125 ATF5Q9Y2D1 282 aaPredicted RBP10.04□□□□□ -0.8
SMAD1-209ENST00000511125 NHSQ6T4R5 1651 aa10.04□□□□□ -0.8
SMAD1-209ENST00000511125 RC3H1Q5TC82 1133 aaKnown RBP10.04□□□□□ -0.8
SMAD1-209ENST00000511125 C3orf67Q6ZVT6 689 aa10.04□□□□□ -0.8
SMAD1-209ENST00000511125 UTP14AQ9BVJ6 771 aaKnown RBP10.04□□□□□ -0.8
SMAD1-209ENST00000511125 ZNF652Q9Y2D9 606 aa10.04□□□□□ -0.8
SMAD1-209ENST00000511125 TJP1Q07157 1748 aa10.04□□□□□ -0.8
SMAD1-209ENST00000511125 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
SMAD1-209ENST00000511125 ANKRD44Q8N8A2 993 aa10.04□□□□□ -0.8
SMAD1-209ENST00000511125 OTUD7AQ8TE49 926 aaPredicted RBP10.04□□□□□ -0.8
SMAD1-209ENST00000511125 GYS1P13807 737 aa10.03□□□□□ -0.8
SMAD1-209ENST00000511125 SLC15A2Q16348 729 aa10.03□□□□□ -0.8
SMAD1-209ENST00000511125 TAF7LQ5H9L4 462 aa10.03□□□□□ -0.8
SMAD1-209ENST00000511125 ERICH6BQ5W0A0 696 aa10.03□□□□□ -0.8
SMAD1-209ENST00000511125 ZNF34Q8IZ26 560 aa10.03□□□□□ -0.8
SMAD1-209ENST00000511125 UPF1Q92900 1129 aaKnown RBP eCLIP10.03□□□□□ -0.8
SMAD1-209ENST00000511125 SEC31BQ9NQW1 1179 aa10.03□□□□□ -0.8
SMAD1-209ENST00000511125 ATP8B2P98198 1209 aa10.03□□□□□ -0.8
SMAD1-209ENST00000511125 HELBQ8NG08 1087 aaPredicted RBP10.03□□□□□ -0.8
SMAD1-209ENST00000511125 ZNF219Q9P2Y4 722 aaPredicted RBP10.03□□□□□ -0.8
SMAD1-209ENST00000511125 ZBTB47Q9UFB7 747 aaPredicted RBP10.03□□□□□ -0.8
SMAD1-209ENST00000511125 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.03□□□□□ -0.8
SMAD1-209ENST00000511125 USP42Q9H9J4 1324 aaKnown RBP10.02□□□□□ -0.8
SMAD1-209ENST00000511125 ERVV-1B6SEH8 477 aa10.02□□□□□ -0.8
SMAD1-209ENST00000511125 H7C1W4 665 aa10.02□□□□□ -0.8
SMAD1-209ENST00000511125 SNAP23O00161 211 aa10.02□□□□□ -0.8
SMAD1-209ENST00000511125 AKT1S1Q96B36 256 aa10.02□□□□□ -0.8
SMAD1-209ENST00000511125 PUS3Q9BZE2 481 aaKnown RBP10.02□□□□□ -0.8
SMAD1-209ENST00000511125 GREM2Q9H772 168 aa10.02□□□□□ -0.8
SMAD1-209ENST00000511125 PNPLA7Q6ZV29 1317 aa10.02□□□□□ -0.81
SMAD1-209ENST00000511125 HSP90AB3PQ58FF7 597 aa10.02□□□□□ -0.81
SMAD1-209ENST00000511125 CENPQQ7L2Z9 268 aaPredicted RBP10.02□□□□□ -0.81
SMAD1-209ENST00000511125 ZBTB38Q8NAP3 1195 aaPredicted RBP10.02□□□□□ -0.81
SMAD1-209ENST00000511125 CHMP4BQ9H444 224 aaKnown RBP10.02□□□□□ -0.81
SMAD1-209ENST00000511125 MMP10P09238 476 aa10.02□□□□□ -0.81
SMAD1-209ENST00000511125 SH3TC1Q8TE82 1336 aa10.01□□□□□ -0.81
SMAD1-209ENST00000511125 FOXO4P98177 505 aa10.01□□□□□ -0.81
SMAD1-209ENST00000511125 RPAP2Q8IXW5 612 aaPredicted RBP10.01□□□□□ -0.81
SMAD1-209ENST00000511125 LRRC24Q50LG9 513 aa10.01□□□□□ -0.81
SMAD1-209ENST00000511125 KDM2BQ8NHM5 1336 aa10.01□□□□□ -0.81
SMAD1-209ENST00000511125 HMMRO75330 724 aa10.01□□□□□ -0.81
SMAD1-209ENST00000511125 SERPINB2P05120 415 aa10.01□□□□□ -0.81
SMAD1-209ENST00000511125 CASP7P55210 303 aa10.01□□□□□ -0.81
SMAD1-209ENST00000511125 CCDC57Q2TAC2 916 aa10.01□□□□□ -0.81
SMAD1-209ENST00000511125 PCCAP05165 728 aaPredicted RBP10□□□□□ -0.81
SMAD1-209ENST00000511125 SSFA2P28290 1259 aa10□□□□□ -0.81
SMAD1-209ENST00000511125 DDR1Q08345 913 aa10□□□□□ -0.81
SMAD1-209ENST00000511125 WTIPA6NIX2 430 aaPredicted RBP10□□□□□ -0.81
SMAD1-209ENST00000511125 NTSR2O95665 410 aa10□□□□□ -0.81
SMAD1-209ENST00000511125 MAP4K4O95819 1239 aaPredicted RBP10□□□□□ -0.81
SMAD1-209ENST00000511125 ITGA6P23229 1130 aa10□□□□□ -0.81
SMAD1-209ENST00000511125 TPTE2Q6XPS3 522 aa10□□□□□ -0.81
SMAD1-209ENST00000511125 CCDC8Q9H0W5 538 aaPredicted RBP10□□□□□ -0.81
SMAD1-209ENST00000511125 LAMB4A4D0S4 1761 aa10□□□□□ -0.81
SMAD1-209ENST00000511125 ATP10DQ9P241 1426 aa10□□□□□ -0.81
SMAD1-209ENST00000511125 C4BP0C0L5 1744 aa9.99□□□□□ -0.81
SMAD1-209ENST00000511125 G3BP1Q13283 466 aaKnown RBP eCLIP9.99□□□□□ -0.81
SMAD1-209ENST00000511125 CNBD1Q8NA66 436 aa9.99□□□□□ -0.81
SMAD1-209ENST00000511125 CACNA1FO60840 1977 aa9.99□□□□□ -0.81
SMAD1-209ENST00000511125 HDAC1Q13547 482 aaPredicted RBP9.99□□□□□ -0.81
SMAD1-209ENST00000511125 TTLL11Q8NHH1 800 aa9.99□□□□□ -0.81
SMAD1-209ENST00000511125 TAF5LO75529 589 aa9.99□□□□□ -0.81
SMAD1-209ENST00000511125 PDE4AP27815 886 aa9.99□□□□□ -0.81
SMAD1-209ENST00000511125 IFIT5Q13325 482 aaKnown RBP9.99□□□□□ -0.81
SMAD1-209ENST00000511125 NEUROD6Q96NK8 337 aa9.99□□□□□ -0.81
SMAD1-209ENST00000511125 ARFGEF2Q9Y6D5 1785 aa9.98□□□□□ -0.81
SMAD1-209ENST00000511125 CTSWP56202 376 aa9.98□□□□□ -0.81
SMAD1-209ENST00000511125 CLEC4GQ6UXB4 293 aa9.98□□□□□ -0.81
SMAD1-209ENST00000511125 CHD1LQ86WJ1 897 aa9.98□□□□□ -0.81
SMAD1-209ENST00000511125 DCTPP1Q9H773 170 aa9.98□□□□□ -0.81
SMAD1-209ENST00000511125 CNNM1Q9NRU3 951 aa9.98□□□□□ -0.81
SMAD1-209ENST00000511125 NDUFB9Q9Y6M9 179 aa9.98□□□□□ -0.81
SMAD1-209ENST00000511125 ABCC12Q96J65 1359 aa9.98□□□□□ -0.81
SMAD1-209ENST00000511125 LDHAL6AQ6ZMR3 332 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms