RNA–Protein interactions for RNA: ENST00000509436.1

NDFIP1-204, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 5

Gene NDFIP1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-204ENST00000509436 GPR101Q96P66 508 aaPredicted RBP20.75■□□□□ 0.91
NDFIP1-204ENST00000509436 BRIP1Q9BX63 1249 aa20.75■□□□□ 0.91
NDFIP1-204ENST00000509436 TSKSQ9UJT2 592 aa20.75■□□□□ 0.91
NDFIP1-204ENST00000509436 CLEC11AQ9Y240 323 aa20.75■□□□□ 0.91
NDFIP1-204ENST00000509436 TRPM7Q96QT4 1865 aa20.75■□□□□ 0.91
NDFIP1-204ENST00000509436 ECE1P42892 770 aa20.74■□□□□ 0.91
NDFIP1-204ENST00000509436 DDX21Q9NR30 783 aaKnown RBP eCLIP20.74■□□□□ 0.91
NDFIP1-204ENST00000509436 ZNF541Q9H0D2 1346 aa20.74■□□□□ 0.91
NDFIP1-204ENST00000509436 CYP19A1P11511 503 aaPredicted RBP20.73■□□□□ 0.91
NDFIP1-204ENST00000509436 PDE6BP35913 854 aa20.73■□□□□ 0.91
NDFIP1-204ENST00000509436 PRPF38BQ5VTL8 546 aaKnown RBP20.73■□□□□ 0.91
NDFIP1-204ENST00000509436 TTC5Q8N0Z6 440 aa20.73■□□□□ 0.91
NDFIP1-204ENST00000509436 SCN7AQ01118 1682 aa20.73■□□□□ 0.91
NDFIP1-204ENST00000509436 SOGA3Q5TF21 947 aa20.72■□□□□ 0.91
NDFIP1-204ENST00000509436 CYP4F22Q6NT55 531 aa20.72■□□□□ 0.91
NDFIP1-204ENST00000509436 RCAN3Q9UKA8 241 aa20.72■□□□□ 0.91
NDFIP1-204ENST00000509436 ZNF790Q6PG37 636 aa20.71■□□□□ 0.91
NDFIP1-204ENST00000509436 ZBTB1Q9Y2K1 713 aa20.71■□□□□ 0.91
NDFIP1-204ENST00000509436 CACNA1FO60840 1977 aa20.71■□□□□ 0.91
NDFIP1-204ENST00000509436 UBR2Q8IWV8 1755 aa20.71■□□□□ 0.91
NDFIP1-204ENST00000509436 CA12O43570 354 aa20.7■□□□□ 0.9
NDFIP1-204ENST00000509436 MAP2K2P36507 400 aa20.7■□□□□ 0.9
NDFIP1-204ENST00000509436 TWISTNBQ3B726 338 aaPredicted RBP20.7■□□□□ 0.9
NDFIP1-204ENST00000509436 ZNF428Q96B54 188 aa20.7■□□□□ 0.9
NDFIP1-204ENST00000509436 EIF4A1P60842 406 aaKnown RBP20.69■□□□□ 0.9
NDFIP1-204ENST00000509436 SLC39A6Q13433 755 aa20.69■□□□□ 0.9
NDFIP1-204ENST00000509436 DGKZQ13574 1117 aa20.69■□□□□ 0.9
NDFIP1-204ENST00000509436 STYK1Q6J9G0 422 aa20.69■□□□□ 0.9
NDFIP1-204ENST00000509436 PRR5LQ6MZQ0 368 aa20.69■□□□□ 0.9
NDFIP1-204ENST00000509436 PRPF40BQ6NWY9 871 aaKnown RBP20.69■□□□□ 0.9
NDFIP1-204ENST00000509436 C8orf58Q8NAV2 365 aa20.69■□□□□ 0.9
NDFIP1-204ENST00000509436 CNKSR1Q969H4 720 aa20.69■□□□□ 0.9
NDFIP1-204ENST00000509436 RNF123Q5XPI4 1314 aa20.69■□□□□ 0.9
NDFIP1-204ENST00000509436 KCNQ3O43525 872 aa20.68■□□□□ 0.9
NDFIP1-204ENST00000509436 C7orf43Q8WVR3 580 aa20.68■□□□□ 0.9
NDFIP1-204ENST00000509436 ELL2O00472 640 aaPredicted RBP20.67■□□□□ 0.9
NDFIP1-204ENST00000509436 HOXB7P09629 217 aa20.67■□□□□ 0.9
NDFIP1-204ENST00000509436 TSPYL6Q8N831 410 aa20.67■□□□□ 0.9
NDFIP1-204ENST00000509436 FMNL2Q96PY5 1086 aa20.67■□□□□ 0.9
NDFIP1-204ENST00000509436 CHMP4AQ9BY43 222 aa20.67■□□□□ 0.9
NDFIP1-204ENST00000509436 AOC2O75106 756 aa20.66■□□□□ 0.9
NDFIP1-204ENST00000509436 VAMP4O75379 141 aa20.66■□□□□ 0.9
NDFIP1-204ENST00000509436 FMR1Q06787 632 aaKnown RBP eCLIP20.66■□□□□ 0.9
NDFIP1-204ENST00000509436 CST9Q5W186 159 aa20.66■□□□□ 0.9
NDFIP1-204ENST00000509436 TBC1D9BQ66K14 1250 aa20.66■□□□□ 0.9
NDFIP1-204ENST00000509436 BICDL1Q6ZP65 573 aa20.66■□□□□ 0.9
NDFIP1-204ENST00000509436 PAXIP1Q6ZW49 1069 aaPredicted RBP20.66■□□□□ 0.9
NDFIP1-204ENST00000509436 TLL2Q9Y6L7 1015 aa20.66■□□□□ 0.9
NDFIP1-204ENST00000509436 BCORQ6W2J9 1755 aa20.65■□□□□ 0.9
NDFIP1-204ENST00000509436 SRGNP10124 158 aa20.65■□□□□ 0.9
NDFIP1-204ENST00000509436 KRT24Q2M2I5 525 aa20.65■□□□□ 0.9
NDFIP1-204ENST00000509436 CCDC24Q8N4L8 307 aa20.65■□□□□ 0.9
NDFIP1-204ENST00000509436 LAMB4A4D0S4 1761 aa20.64■□□□□ 0.9
NDFIP1-204ENST00000509436 FZD9O00144 591 aa20.64■□□□□ 0.89
NDFIP1-204ENST00000509436 GRM1Q13255 1194 aa20.64■□□□□ 0.89
NDFIP1-204ENST00000509436 ALDH1L2Q3SY69 923 aa20.64■□□□□ 0.89
NDFIP1-204ENST00000509436 HEG1Q9ULI3 1381 aa20.63■□□□□ 0.89
NDFIP1-204ENST00000509436 RARSP54136 660 aaKnown RBP20.63■□□□□ 0.89
NDFIP1-204ENST00000509436 BRPF1P55201 1214 aaPredicted RBP20.63■□□□□ 0.89
NDFIP1-204ENST00000509436 FKBP4Q02790 459 aaKnown RBP eCLIP20.63■□□□□ 0.89
NDFIP1-204ENST00000509436 CCDC93Q567U6 631 aa20.63■□□□□ 0.89
NDFIP1-204ENST00000509436 MASTLQ96GX5 879 aa20.63■□□□□ 0.89
NDFIP1-204ENST00000509436 ZNF496Q96IT1 587 aaPredicted RBP20.63■□□□□ 0.89
NDFIP1-204ENST00000509436 EIF5P55010 431 aaKnown RBP20.62■□□□□ 0.89
NDFIP1-204ENST00000509436 GPC2Q8N158 579 aa20.62■□□□□ 0.89
NDFIP1-204ENST00000509436 SUPT16HQ9Y5B9 1047 aaKnown RBP20.62■□□□□ 0.89
NDFIP1-204ENST00000509436 SNRPA1P09661 255 aaKnown RBP20.61■□□□□ 0.89
NDFIP1-204ENST00000509436 SOX10P56693 466 aa20.61■□□□□ 0.89
NDFIP1-204ENST00000509436 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.61■□□□□ 0.89
NDFIP1-204ENST00000509436 ZNF277Q9NRM2 450 aaPredicted RBP20.61■□□□□ 0.89
NDFIP1-204ENST00000509436 SMC4Q9NTJ3 1288 aa20.61■□□□□ 0.89
NDFIP1-204ENST00000509436 HDGFL1Q5TGJ6 251 aa20.6■□□□□ 0.89
NDFIP1-204ENST00000509436 CCDC30Q5VVM6 783 aa20.6■□□□□ 0.89
NDFIP1-204ENST00000509436 VSIG10Q8N0Z9 540 aa20.6■□□□□ 0.89
NDFIP1-204ENST00000509436 SSH1Q8WYL5 1049 aa20.59■□□□□ 0.89
NDFIP1-204ENST00000509436 HHIPL1Q96JK4 782 aa20.59■□□□□ 0.89
NDFIP1-204ENST00000509436 STK31Q9BXU1 1019 aa20.59■□□□□ 0.89
NDFIP1-204ENST00000509436 A0A087WZG4 1122 aa20.58■□□□□ 0.89
NDFIP1-204ENST00000509436 BCAR3O75815 825 aa20.58■□□□□ 0.89
NDFIP1-204ENST00000509436 CANXP27824 592 aaKnown RBP20.58■□□□□ 0.89
NDFIP1-204ENST00000509436 SAPCD2Q86UD0 394 aa20.58■□□□□ 0.89
NDFIP1-204ENST00000509436 BCL2L13Q9BXK5 485 aa20.58■□□□□ 0.89
NDFIP1-204ENST00000509436 TRAF5O00463 557 aa20.57■□□□□ 0.88
NDFIP1-204ENST00000509436 EIF2S2P20042 333 aaKnown RBP20.57■□□□□ 0.88
NDFIP1-204ENST00000509436 CNBD1Q8NA66 436 aa20.57■□□□□ 0.88
NDFIP1-204ENST00000509436 SNED1Q8TER0 1413 aa20.57■□□□□ 0.88
NDFIP1-204ENST00000509436 TEX13AQ9BXU3 409 aaPredicted RBP20.57■□□□□ 0.88
NDFIP1-204ENST00000509436 KIF16BQ96L93 1317 aa20.56■□□□□ 0.88
NDFIP1-204ENST00000509436 IARSP41252 1262 aaKnown RBP20.56■□□□□ 0.88
NDFIP1-204ENST00000509436 RRP1P56182 461 aaKnown RBP20.56■□□□□ 0.88
NDFIP1-204ENST00000509436 COL4A5P29400 1685 aa20.56■□□□□ 0.88
NDFIP1-204ENST00000509436 MRPL50Q8N5N7 158 aaKnown RBP20.55■□□□□ 0.88
NDFIP1-204ENST00000509436 PRAMEF22A3QJZ6 481 aa20.54■□□□□ 0.88
NDFIP1-204ENST00000509436 TCERG1O14776 1098 aaKnown RBP20.54■□□□□ 0.88
NDFIP1-204ENST00000509436 SCNN1DP51172 638 aa20.54■□□□□ 0.88
NDFIP1-204ENST00000509436 ST5P78524 1137 aa20.54■□□□□ 0.88
NDFIP1-204ENST00000509436 RTKN2Q8IZC4 609 aa20.54■□□□□ 0.88
NDFIP1-204ENST00000509436 NECTIN2Q92692 538 aa20.54■□□□□ 0.88
NDFIP1-204ENST00000509436 IPO8O15397 1037 aaKnown RBP20.53■□□□□ 0.88
NDFIP1-204ENST00000509436 NEFLP07196 543 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms