RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 OXCT2Q9BYC2 517 aaPredicted RBP8.12□□□□□ -1.11
NFKB1-208ENST00000509165 TGFBR3LH3BV60 316 aa8.11□□□□□ -1.11
NFKB1-208ENST00000509165 KCNQ4P56696 695 aa8.11□□□□□ -1.11
NFKB1-208ENST00000509165 SFSWAPQ12872 951 aaKnown RBP8.11□□□□□ -1.11
NFKB1-208ENST00000509165 HIF1AQ16665 826 aa8.11□□□□□ -1.11
NFKB1-208ENST00000509165 C1orf229Q6ZS94 237 aaPredicted RBP8.11□□□□□ -1.11
NFKB1-208ENST00000509165 BTLAQ7Z6A9 289 aa8.11□□□□□ -1.11
NFKB1-208ENST00000509165 ARID3AQ99856 593 aa8.11□□□□□ -1.11
NFKB1-208ENST00000509165 KLK14Q9P0G3 267 aa8.11□□□□□ -1.11
NFKB1-208ENST00000509165 MARK1Q9P0L2 795 aa8.11□□□□□ -1.11
NFKB1-208ENST00000509165 BCRP11274 1271 aa8.1□□□□□ -1.11
NFKB1-208ENST00000509165 ATP2B4P23634 1241 aa8.1□□□□□ -1.11
NFKB1-208ENST00000509165 BAG6P46379 1132 aa8.1□□□□□ -1.11
NFKB1-208ENST00000509165 DGKZQ13574 1117 aa8.1□□□□□ -1.11
NFKB1-208ENST00000509165 COX20Q5RI15 118 aa8.1□□□□□ -1.11
NFKB1-208ENST00000509165 VTI1AQ96AJ9 217 aa8.1□□□□□ -1.11
NFKB1-208ENST00000509165 SAP130Q9H0E3 1048 aa8.1□□□□□ -1.11
NFKB1-208ENST00000509165 BRD7Q9NPI1 651 aa8.1□□□□□ -1.11
NFKB1-208ENST00000509165 ENAMQ9NRM1 1142 aa8.1□□□□□ -1.11
NFKB1-208ENST00000509165 LRRC4BQ9NT99 713 aa8.1□□□□□ -1.11
NFKB1-208ENST00000509165 KLF15Q9UIH9 416 aa8.1□□□□□ -1.11
NFKB1-208ENST00000509165 OIP5O43482 229 aa8.09□□□□□ -1.11
NFKB1-208ENST00000509165 FURINP09958 794 aa8.09□□□□□ -1.11
NFKB1-208ENST00000509165 ARAFP10398 606 aa8.09□□□□□ -1.11
NFKB1-208ENST00000509165 C11orf91Q3C1V1 193 aa8.09□□□□□ -1.11
NFKB1-208ENST00000509165 CEP63Q96MT8 703 aa8.09□□□□□ -1.11
NFKB1-208ENST00000509165 AVENQ9NQS1 362 aaPredicted RBP8.09□□□□□ -1.11
NFKB1-208ENST00000509165 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.09□□□□□ -1.11
NFKB1-208ENST00000509165 CARNS1A5YM72 827 aa8.08□□□□□ -1.12
NFKB1-208ENST00000509165 GRNP28799 593 aaKnown RBP8.08□□□□□ -1.12
NFKB1-208ENST00000509165 BEND7Q8N7W2 519 aaPredicted RBP8.08□□□□□ -1.12
NFKB1-208ENST00000509165 MKNK1Q9BUB5 465 aa8.08□□□□□ -1.12
NFKB1-208ENST00000509165 GGA1Q9UJY5 639 aa8.08□□□□□ -1.12
NFKB1-208ENST00000509165 GDF2Q9UK05 429 aaPredicted RBP8.08□□□□□ -1.12
NFKB1-208ENST00000509165 SSFA2P28290 1259 aa8.07□□□□□ -1.12
NFKB1-208ENST00000509165 INPP5BP32019 993 aa8.07□□□□□ -1.12
NFKB1-208ENST00000509165 FAM26DQ5JW98 314 aa8.07□□□□□ -1.12
NFKB1-208ENST00000509165 SLCO4C1Q6ZQN7 724 aa8.07□□□□□ -1.12
NFKB1-208ENST00000509165 GOLGA6L1Q8N7Z2 621 aa8.07□□□□□ -1.12
NFKB1-208ENST00000509165 SLC30A3Q99726 388 aa8.07□□□□□ -1.12
NFKB1-208ENST00000509165 PTCD1O75127 700 aaKnown RBP8.06□□□□□ -1.12
NFKB1-208ENST00000509165 ZNF468Q5VIY5 522 aaPredicted RBP8.06□□□□□ -1.12
NFKB1-208ENST00000509165 PHLDB3Q6NSJ2 640 aa8.06□□□□□ -1.12
NFKB1-208ENST00000509165 C16orf46Q6P387 395 aa8.06□□□□□ -1.12
NFKB1-208ENST00000509165 FCHSD1Q86WN1 690 aa8.06□□□□□ -1.12
NFKB1-208ENST00000509165 MDFIQ99750 246 aa8.06□□□□□ -1.12
NFKB1-208ENST00000509165 KCNH4Q9UQ05 1017 aa8.06□□□□□ -1.12
NFKB1-208ENST00000509165 SHISA8B8ZZ34 492 aa8.05□□□□□ -1.12
NFKB1-208ENST00000509165 TNFRSF10BO14763 440 aa8.05□□□□□ -1.12
NFKB1-208ENST00000509165 SCNN1AP37088 669 aa8.05□□□□□ -1.12
NFKB1-208ENST00000509165 IDH3AP50213 366 aa8.05□□□□□ -1.12
NFKB1-208ENST00000509165 IFT43Q96FT9 208 aa8.05□□□□□ -1.12
NFKB1-208ENST00000509165 NEURL1BA8MQ27 555 aa8.04□□□□□ -1.12
NFKB1-208ENST00000509165 OPLAHO14841 1288 aa8.04□□□□□ -1.12
NFKB1-208ENST00000509165 MICAL2O94851 1124 aa8.04□□□□□ -1.12
NFKB1-208ENST00000509165 EPXP11678 715 aa8.04□□□□□ -1.12
NFKB1-208ENST00000509165 PCBP4P57723 403 aaKnown RBP8.04□□□□□ -1.12
NFKB1-208ENST00000509165 SPEM2Q0P670 501 aa8.04□□□□□ -1.12
NFKB1-208ENST00000509165 NAA30Q147X3 362 aaPredicted RBP8.04□□□□□ -1.12
NFKB1-208ENST00000509165 PODNQ7Z5L7 613 aa8.04□□□□□ -1.12
NFKB1-208ENST00000509165 ETFBKMTQ8IXQ9 262 aa8.04□□□□□ -1.12
NFKB1-208ENST00000509165 NEDD1Q8NHV4 660 aa8.04□□□□□ -1.12
NFKB1-208ENST00000509165 EDARADDQ8WWZ3 215 aa8.04□□□□□ -1.12
NFKB1-208ENST00000509165 KRTAP4-12Q9BQ66 201 aa8.04□□□□□ -1.12
NFKB1-208ENST00000509165 SEPT3Q9UH03 358 aa8.04□□□□□ -1.12
NFKB1-208ENST00000509165 USTQ9Y2C2 406 aa8.04□□□□□ -1.12
NFKB1-208ENST00000509165 ADH6P28332 368 aa8.03□□□□□ -1.12
NFKB1-208ENST00000509165 PRR12Q9ULL5 1215 aa8.03□□□□□ -1.12
NFKB1-208ENST00000509165 SIN3BO75182 1162 aa8.02□□□□□ -1.13
NFKB1-208ENST00000509165 HOXB4P17483 251 aaPredicted RBP8.02□□□□□ -1.13
NFKB1-208ENST00000509165 ARSDP51689 593 aa8.02□□□□□ -1.13
NFKB1-208ENST00000509165 SYT9Q86SS6 491 aa8.02□□□□□ -1.13
NFKB1-208ENST00000509165 TREML1Q86YW5 311 aa8.02□□□□□ -1.13
NFKB1-208ENST00000509165 GSX2Q9BZM3 304 aa8.02□□□□□ -1.13
NFKB1-208ENST00000509165 RAB44Q7Z6P3 723 aaPredicted RBP8.01□□□□□ -1.13
NFKB1-208ENST00000509165 RETREG2Q8NC44 543 aa8.01□□□□□ -1.13
NFKB1-208ENST00000509165 KRTAP9-9Q9BYP9 154 aa8.01□□□□□ -1.13
NFKB1-208ENST00000509165 KRTAP9-4Q9BYQ2 154 aa8.01□□□□□ -1.13
NFKB1-208ENST00000509165 KRBA1A5PL33 1030 aa8□□□□□ -1.13
NFKB1-208ENST00000509165 BRD2P25440 801 aaKnown RBP8□□□□□ -1.13
NFKB1-208ENST00000509165 TNFRSF25Q93038 417 aa8□□□□□ -1.13
NFKB1-208ENST00000509165 BTBD6Q96KE9 485 aa8□□□□□ -1.13
NFKB1-208ENST00000509165 C11orf16Q9NQ32 467 aa8□□□□□ -1.13
NFKB1-208ENST00000509165 ADARB2-AS1A8MUL3 147 aa7.99□□□□□ -1.13
NFKB1-208ENST00000509165 ZBTB39O15060 712 aa7.99□□□□□ -1.13
NFKB1-208ENST00000509165 EFCC1Q9HA90 598 aa7.99□□□□□ -1.13
NFKB1-208ENST00000509165 USP20Q9Y2K6 914 aa7.99□□□□□ -1.13
NFKB1-208ENST00000509165 EPB42P16452 691 aa7.98□□□□□ -1.13
NFKB1-208ENST00000509165 SNRPNP63162 240 aaKnown RBP7.98□□□□□ -1.13
NFKB1-208ENST00000509165 CCINQ13939 588 aa7.98□□□□□ -1.13
NFKB1-208ENST00000509165 STIM2Q9P246 746 aa7.98□□□□□ -1.13
NFKB1-208ENST00000509165 RTCBQ9Y3I0 505 aaKnown RBP7.98□□□□□ -1.13
NFKB1-208ENST00000509165 KCNMB2Q9Y691 235 aa7.98□□□□□ -1.13
NFKB1-208ENST00000509165 ELOA3CA0A087WX78 387 aaPredicted RBP7.97□□□□□ -1.13
NFKB1-208ENST00000509165 ELOA3DA6NLF2 546 aaPredicted RBP7.97□□□□□ -1.13
NFKB1-208ENST00000509165 EGFRP00533 1210 aa7.97□□□□□ -1.13
NFKB1-208ENST00000509165 ELOA3BQ3SY89 546 aa7.97□□□□□ -1.13
NFKB1-208ENST00000509165 ELOA3Q8NG57 546 aa7.97□□□□□ -1.13
NFKB1-208ENST00000509165 HELQQ8TDG4 1101 aa7.97□□□□□ -1.13
NFKB1-208ENST00000509165 BHMTQ93088 406 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms