RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 HYPKQ9NX55 129 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 ABCC11Q96J66 1382 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 NWD1Q149M9 1564 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 HMMRO75330 724 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 UFL1O94874 794 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 ECE1P42892 770 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 PPP4R2Q9NY27 417 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 TMOD4Q9NZQ9 345 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 RAI14Q9P0K7 980 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 NSD2O96028 1365 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 MMP10P09238 476 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 IFIT2P09913 472 aaKnown RBP3.58□□□□□ -1.84
NEDD4-208ENST00000508342 FBLN1P23142 703 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 TAOK3Q9H2K8 898 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 A0A1W2PP64 1363 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 LOC102724428A0A0B4J2F2 783 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 ERICH2A1L162 156 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 C21orf2O43822 256 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 SIK1P57059 783 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 FLIIQ13045 1269 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 NFE2L2Q16236 605 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 C9orf131Q5VYM1 1079 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 GADL1Q6ZQY3 521 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 ZNF710Q8N1W2 664 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 MPNDQ8N594 471 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 HOOK2Q96ED9 719 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 GGA1Q9UJY5 639 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 BRWD3Q6RI45 1802 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 ANKRD26Q9UPS8 1709 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 CPSF1Q10570 1443 aaKnown RBP3.58□□□□□ -1.84
NEDD4-208ENST00000508342 PTPRUQ92729 1446 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 HTATSF1O43719 755 aaKnown RBP3.58□□□□□ -1.84
NEDD4-208ENST00000508342 CEP120Q8N960 986 aa3.58□□□□□ -1.84
NEDD4-208ENST00000508342 U3KPZ7 1027 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-208ENST00000508342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.57□□□□□ -1.84
NEDD4-208ENST00000508342 SERPINB2P05120 415 aa3.57□□□□□ -1.84
NEDD4-208ENST00000508342 POLR3DP05423 398 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-208ENST00000508342 SSFA2P28290 1259 aa3.57□□□□□ -1.84
NEDD4-208ENST00000508342 GSTO1P78417 241 aa3.57□□□□□ -1.84
NEDD4-208ENST00000508342 USPL1Q5W0Q7 1092 aa3.57□□□□□ -1.84
NEDD4-208ENST00000508342 SYNE3Q6ZMZ3 975 aa3.57□□□□□ -1.84
NEDD4-208ENST00000508342 CREBRFQ8IUR6 639 aa3.57□□□□□ -1.84
NEDD4-208ENST00000508342 PDZRN3Q9UPQ7 1066 aa3.57□□□□□ -1.84
NEDD4-208ENST00000508342 SIL1Q9H173 461 aa3.57□□□□□ -1.84
NEDD4-208ENST00000508342 CSADQ9Y600 493 aa3.57□□□□□ -1.84
NEDD4-208ENST00000508342 XIRP1Q702N8 1843 aaKnown RBP3.57□□□□□ -1.84
NEDD4-208ENST00000508342 ZFYVE9O95405 1425 aa3.57□□□□□ -1.84
NEDD4-208ENST00000508342 IFIT5Q13325 482 aaKnown RBP3.57□□□□□ -1.84
NEDD4-208ENST00000508342 HSP90AB2PQ58FF8 381 aa3.57□□□□□ -1.84
NEDD4-208ENST00000508342 HS6ST3Q8IZP7 471 aa3.57□□□□□ -1.84
NEDD4-208ENST00000508342 FEZ1Q99689 392 aa3.57□□□□□ -1.84
NEDD4-208ENST00000508342 SLC52A2Q9HAB3 445 aa3.57□□□□□ -1.84
NEDD4-208ENST00000508342 STK24Q9Y6E0 443 aa3.57□□□□□ -1.84
NEDD4-208ENST00000508342 A0A0U1RQG5 324 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-208ENST00000508342 UBTFL1P0CB47 393 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-208ENST00000508342 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.57□□□□□ -1.847e-8■■■■■ 186.3
NEDD4-208ENST00000508342 COL16A1Q07092 1604 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-208ENST00000508342 ANKRD2Q9GZV1 360 aa3.57□□□□□ -1.84
NEDD4-208ENST00000508342 LRP2BPQ9P2M1 347 aa3.57□□□□□ -1.84
NEDD4-208ENST00000508342 AFDNP55196 1824 aaKnown RBP3.57□□□□□ -1.84
NEDD4-208ENST00000508342 NPR1P16066 1061 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 PICALMQ13492 652 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 SYNE4Q8N205 404 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 MASTLQ96GX5 879 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 MAP3K2Q9Y2U5 619 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 LRRFIP2Q9Y608 721 aaKnown RBP3.56□□□□□ -1.84
NEDD4-208ENST00000508342 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.56□□□□□ -1.844e-6■■□□□ 13.6
NEDD4-208ENST00000508342 RGPD2P0DJD1 1756 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 ZNF157P51786 506 aaPredicted RBP3.56□□□□□ -1.84
NEDD4-208ENST00000508342 DCTN1Q14203 1278 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 EIF4A2Q14240 407 aaKnown RBP3.56□□□□□ -1.84
NEDD4-208ENST00000508342 DOK7Q18PE1 504 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 CPLX2Q6PUV4 134 aaKnown RBP3.56□□□□□ -1.84
NEDD4-208ENST00000508342 DNAJC2Q99543 621 aaKnown RBP3.56□□□□□ -1.84
NEDD4-208ENST00000508342 MKRN1Q9UHC7 482 aaKnown RBP3.56□□□□□ -1.84
NEDD4-208ENST00000508342 NSFL1CQ9UNZ2 370 aaKnown RBP3.56□□□□□ -1.84
NEDD4-208ENST00000508342 KIF3AQ9Y496 699 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 ERCC3P19447 782 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 SPTY2D1Q68D10 685 aaPredicted RBP3.56□□□□□ -1.84
NEDD4-208ENST00000508342 NBPF11Q86T75 865 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 SOS2Q07890 1332 aaPredicted RBP3.56□□□□□ -1.84
NEDD4-208ENST00000508342 RTL1A6NKG5 1358 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 IFIT1P09914 478 aaKnown RBP3.56□□□□□ -1.84
NEDD4-208ENST00000508342 MFAP1P55081 439 aaKnown RBP3.56□□□□□ -1.84
NEDD4-208ENST00000508342 RASSF7Q02833 373 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 MAGEC2Q9UBF1 373 aaPredicted RBP3.56□□□□□ -1.84
NEDD4-208ENST00000508342 DOT1LQ8TEK3 1739 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 LMNB1P20700 586 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 CNGA1P29973 690 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 SREBF2Q12772 1141 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 PDE3AQ14432 1141 aa3.56□□□□□ -1.84
NEDD4-208ENST00000508342 ATP5J2-PTCD1G3V325 749 aa3.55□□□□□ -1.84
NEDD4-208ENST00000508342 PES1O00541 588 aaKnown RBP3.55□□□□□ -1.84
NEDD4-208ENST00000508342 HLA-DOAP06340 250 aa3.55□□□□□ -1.84
NEDD4-208ENST00000508342 OSBPP22059 807 aa3.55□□□□□ -1.84
NEDD4-208ENST00000508342 RFX1P22670 979 aa3.55□□□□□ -1.84
NEDD4-208ENST00000508342 HOXD10P28358 340 aa3.55□□□□□ -1.84
NEDD4-208ENST00000508342 TGFB2P61812 414 aa3.55□□□□□ -1.84
NEDD4-208ENST00000508342 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.55□□□□□ -1.84
NEDD4-208ENST00000508342 DRC7Q8IY82 874 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms