RNA–Protein interactions for RNA: ENST00000507855.5

CCDC30-212, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC30, Length 2,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-212ENST00000507855 MARSP56192 900 aaKnown RBP5□□□□□ -1.61
CCDC30-212ENST00000507855 WDR44Q5JSH3 913 aa5□□□□□ -1.61
CCDC30-212ENST00000507855 CEP63Q96MT8 703 aa5□□□□□ -1.61
CCDC30-212ENST00000507855 SLC30A3Q99726 388 aa5□□□□□ -1.61
CCDC30-212ENST00000507855 EGFL7Q9UHF1 273 aa5□□□□□ -1.61
CCDC30-212ENST00000507855 WWC3Q9ULE0 1092 aa5□□□□□ -1.61
CCDC30-212ENST00000507855 ANKRD33BA6NCL7 494 aa4.99□□□□□ -1.61
CCDC30-212ENST00000507855 TGFBR3LH3BV60 316 aa4.99□□□□□ -1.61
CCDC30-212ENST00000507855 C2CD2LO14523 706 aa4.99□□□□□ -1.61
CCDC30-212ENST00000507855 TATP17735 454 aaPredicted RBP4.99□□□□□ -1.61
CCDC30-212ENST00000507855 BRD2P25440 801 aaKnown RBP4.99□□□□□ -1.61
CCDC30-212ENST00000507855 TARSP26639 723 aaKnown RBP4.99□□□□□ -1.61
CCDC30-212ENST00000507855 MAPK1P28482 360 aa4.99□□□□□ -1.61
CCDC30-212ENST00000507855 CTBSQ01459 385 aa4.99□□□□□ -1.61
CCDC30-212ENST00000507855 ORC1Q13415 861 aa4.99□□□□□ -1.61
CCDC30-212ENST00000507855 USPL1Q5W0Q7 1092 aa4.99□□□□□ -1.61
CCDC30-212ENST00000507855 KRT25Q7Z3Z0 450 aa4.99□□□□□ -1.61
CCDC30-212ENST00000507855 BRD7Q9NPI1 651 aa4.99□□□□□ -1.61
CCDC30-212ENST00000507855 CHMP3Q9Y3E7 222 aa4.99□□□□□ -1.61
CCDC30-212ENST00000507855 RTCBQ9Y3I0 505 aaKnown RBP4.99□□□□□ -1.61
CCDC30-212ENST00000507855 PDGFAP04085 211 aa4.99□□□□□ -1.61
CCDC30-212ENST00000507855 MAPTP10636 758 aaKnown RBP4.99□□□□□ -1.61
CCDC30-212ENST00000507855 GAS6Q14393 721 aa4.99□□□□□ -1.61
CCDC30-212ENST00000507855 CMTR1Q8N1G2 835 aaKnown RBP4.99□□□□□ -1.61
CCDC30-212ENST00000507855 NDFIP2Q9NV92 336 aa4.99□□□□□ -1.61
CCDC30-212ENST00000507855 KHNYNO15037 678 aaKnown RBP4.98□□□□□ -1.61
CCDC30-212ENST00000507855 KRT76Q01546 638 aa4.98□□□□□ -1.61
CCDC30-212ENST00000507855 SF3B2Q13435 895 aaKnown RBP4.98□□□□□ -1.61
CCDC30-212ENST00000507855 C8orf34Q49A92 452 aa4.98□□□□□ -1.61
CCDC30-212ENST00000507855 NUCKS1Q9H1E3 243 aaKnown RBP4.98□□□□□ -1.61
CCDC30-212ENST00000507855 TMEM63CQ9P1W3 806 aa4.98□□□□□ -1.61
CCDC30-212ENST00000507855 ZFATQ9P243 1243 aa4.98□□□□□ -1.61
CCDC30-212ENST00000507855 FOXD3Q9UJU5 478 aaPredicted RBP4.98□□□□□ -1.61
CCDC30-212ENST00000507855 CYP2E1P05181 493 aaPredicted RBP4.98□□□□□ -1.61
CCDC30-212ENST00000507855 TNP2Q05952 138 aa4.98□□□□□ -1.61
CCDC30-212ENST00000507855 NPAS4Q8IUM7 802 aa4.98□□□□□ -1.61
CCDC30-212ENST00000507855 FAM161BQ96MY7 647 aa4.98□□□□□ -1.61
CCDC30-212ENST00000507855 SENP2Q9HC62 589 aa4.98□□□□□ -1.61
CCDC30-212ENST00000507855 UNCXA6NJT0 531 aa4.97□□□□□ -1.61
CCDC30-212ENST00000507855 EFSO43281 561 aa4.97□□□□□ -1.61
CCDC30-212ENST00000507855 ZNF787Q6DD87 383 aa4.97□□□□□ -1.61
CCDC30-212ENST00000507855 PI16Q6UXB8 463 aa4.97□□□□□ -1.61
CCDC30-212ENST00000507855 SASH3O75995 380 aa4.97□□□□□ -1.61
CCDC30-212ENST00000507855 FAM13AO94988 1023 aa4.97□□□□□ -1.61
CCDC30-212ENST00000507855 TRIM52Q96A61 297 aa4.97□□□□□ -1.61
CCDC30-212ENST00000507855 NIF3L1Q9GZT8 377 aa4.97□□□□□ -1.61
CCDC30-212ENST00000507855 CNTN3Q9P232 1028 aa4.97□□□□□ -1.61
CCDC30-212ENST00000507855 A0A0U1RQG5 324 aaPredicted RBP4.96□□□□□ -1.61
CCDC30-212ENST00000507855 ATXN7O15265 892 aaPredicted RBP4.96□□□□□ -1.61
CCDC30-212ENST00000507855 TRPA1O75762 1119 aa4.96□□□□□ -1.61
CCDC30-212ENST00000507855 ACPPP15309 386 aa4.96□□□□□ -1.61
CCDC30-212ENST00000507855 ADAMTSL4Q6UY14 1074 aa4.96□□□□□ -1.61
CCDC30-212ENST00000507855 TRIM22Q8IYM9 498 aa4.96□□□□□ -1.61
CCDC30-212ENST00000507855 KLF15Q9UIH9 416 aa4.96□□□□□ -1.61
CCDC30-212ENST00000507855 POLR3DP05423 398 aaPredicted RBP4.96□□□□□ -1.62
CCDC30-212ENST00000507855 P4HBP07237 508 aaKnown RBP4.96□□□□□ -1.62
CCDC30-212ENST00000507855 IRS1P35568 1242 aa4.96□□□□□ -1.62
CCDC30-212ENST00000507855 GJD3Q8N144 294 aa4.96□□□□□ -1.62
CCDC30-212ENST00000507855 PGBD3Q8N328 593 aa4.96□□□□□ -1.62
CCDC30-212ENST00000507855 DCTN4Q9UJW0 460 aa4.96□□□□□ -1.62
CCDC30-212ENST00000507855 GJA3Q9Y6H8 435 aa4.96□□□□□ -1.62
CCDC30-212ENST00000507855 PCBP4P57723 403 aaKnown RBP4.95□□□□□ -1.62
CCDC30-212ENST00000507855 COL13A1Q5TAT6 717 aaPredicted RBP4.95□□□□□ -1.62
CCDC30-212ENST00000507855 TMC1Q8TDI8 760 aa4.95□□□□□ -1.62
CCDC30-212ENST00000507855 KIFC2Q96AC6 838 aa4.95□□□□□ -1.62
CCDC30-212ENST00000507855 CFHR5Q9BXR6 569 aa4.95□□□□□ -1.62
CCDC30-212ENST00000507855 EFHC2Q5JST6 749 aa4.95□□□□□ -1.62
CCDC30-212ENST00000507855 LCE2AQ5TA79 106 aaPredicted RBP4.95□□□□□ -1.62
CCDC30-212ENST00000507855 C1orf229Q6ZS94 237 aaPredicted RBP4.95□□□□□ -1.62
CCDC30-212ENST00000507855 FAM129BQ96TA1 746 aa4.95□□□□□ -1.62
CCDC30-212ENST00000507855 GSX2Q9BZM3 304 aa4.95□□□□□ -1.62
CCDC30-212ENST00000507855 NXF1Q9UBU9 619 aaKnown RBP4.95□□□□□ -1.62
CCDC30-212ENST00000507855 BRPF3Q9ULD4 1205 aa4.95□□□□□ -1.62
CCDC30-212ENST00000507855 PCDHGC4Q9Y5F7 938 aa4.95□□□□□ -1.62
CCDC30-212ENST00000507855 XYLBO75191 536 aa4.94□□□□□ -1.62
CCDC30-212ENST00000507855 MZF1P28698 734 aaPredicted RBP4.94□□□□□ -1.62
CCDC30-212ENST00000507855 DSC3Q14574 896 aa4.94□□□□□ -1.62
CCDC30-212ENST00000507855 C1orf127Q8N9H9 656 aa4.94□□□□□ -1.62
CCDC30-212ENST00000507855 CHRDQ9H2X0 955 aa4.94□□□□□ -1.62
CCDC30-212ENST00000507855 LATS2Q9NRM7 1088 aa4.94□□□□□ -1.62
CCDC30-212ENST00000507855 KANSL3Q9P2N6 904 aa4.94□□□□□ -1.62
CCDC30-212ENST00000507855 ARSDP51689 593 aa4.94□□□□□ -1.62
CCDC30-212ENST00000507855 MLLT1Q03111 559 aaPredicted RBP4.94□□□□□ -1.62
CCDC30-212ENST00000507855 NFX1Q12986 1120 aaKnown RBP4.94□□□□□ -1.62
CCDC30-212ENST00000507855 IER5Q5VY09 327 aa4.94□□□□□ -1.62
CCDC30-212ENST00000507855 NLRP8Q86W28 1048 aa4.94□□□□□ -1.62
CCDC30-212ENST00000507855 ZNF775Q96BV0 537 aaPredicted RBP4.94□□□□□ -1.62
CCDC30-212ENST00000507855 ASB16Q96NS5 453 aa4.94□□□□□ -1.62
CCDC30-212ENST00000507855 HHIPQ96QV1 700 aa4.94□□□□□ -1.62
CCDC30-212ENST00000507855 NEUROD4Q9HD90 331 aa4.94□□□□□ -1.62
CCDC30-212ENST00000507855 CCDC9Q9Y3X0 531 aaKnown RBP4.94□□□□□ -1.62
CCDC30-212ENST00000507855 TREHO43280 583 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 MMP20O60882 483 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 IGSF3O75054 1194 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 MAPK8P45983 427 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 PLAURQ03405 335 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 FBXO33Q7Z6M2 555 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 ABTB2Q8N961 1025 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 RBCK1Q9BYM8 510 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms