RNA–Protein interactions for RNA: ENST00000506649.5

CD164-208, Transcript of CD164 molecule, human

TSL 3

Gene CD164, Length 778 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD164-208	ENST00000506649	ADAMTS8	Q9UP79	889 aa		27.79	■■■□□ 2.04
CD164-208	ENST00000506649	NTSR2	O95665	410 aa		27.78	■■■□□ 2.04
CD164-208	ENST00000506649	RBM17	Q96I25	401 aa	Known RBP	27.78	■■■□□ 2.04
CD164-208	ENST00000506649	CRAMP1	Q96RY5	1269 aa		27.78	■■■□□ 2.04
CD164-208	ENST00000506649	RNF123	Q5XPI4	1314 aa		27.77	■■■□□ 2.04
CD164-208	ENST00000506649	CHL1	O00533	1208 aa		27.77	■■■□□ 2.04
CD164-208	ENST00000506649	IARS	P41252	1262 aa	Known RBP	27.77	■■■□□ 2.04
CD164-208	ENST00000506649	HSP90AB3P	Q58FF7	597 aa		27.77	■■■□□ 2.04
CD164-208	ENST00000506649	CHADL	Q6NUI6	762 aa		27.77	■■■□□ 2.04
CD164-208	ENST00000506649	SYNE4	Q8N205	404 aa		27.77	■■■□□ 2.04
CD164-208	ENST00000506649	OLFM4	Q6UX06	510 aa		27.76	■■■□□ 2.03
CD164-208	ENST00000506649	NLRP3	Q96P20	1036 aa		27.75	■■■□□ 2.03
CD164-208	ENST00000506649	UTP14A	Q9BVJ6	771 aa	Known RBP	27.75	■■■□□ 2.03
CD164-208	ENST00000506649	TRIM35	Q9UPQ4	493 aa		27.75	■■■□□ 2.03
CD164-208	ENST00000506649	SLC10A5	Q5PT55	438 aa		27.74	■■■□□ 2.03
CD164-208	ENST00000506649	JDP2	Q8WYK2	163 aa		27.74	■■■□□ 2.03
CD164-208	ENST00000506649	SNED1	Q8TER0	1413 aa		27.74	■■■□□ 2.03
CD164-208	ENST00000506649	FZD9	O00144	591 aa		27.73	■■■□□ 2.03
CD164-208	ENST00000506649	PROSER3	Q2NL68	480 aa		27.73	■■■□□ 2.03
CD164-208	ENST00000506649	DDX21	Q9NR30	783 aa	Known RBP eCLIP	27.73	■■■□□ 2.03
CD164-208	ENST00000506649	HOXB7	P09629	217 aa		27.72	■■■□□ 2.03
CD164-208	ENST00000506649	COPS6	Q7L5N1	327 aa		27.72	■■■□□ 2.03
CD164-208	ENST00000506649	LDHD	Q86WU2	507 aa		27.72	■■■□□ 2.03
CD164-208	ENST00000506649	TMX4	Q9H1E5	349 aa	Predicted RBP	27.72	■■■□□ 2.03
CD164-208	ENST00000506649	TAF1D	Q9H5J8	278 aa	Predicted RBP	27.72	■■■□□ 2.03
CD164-208	ENST00000506649	SCN4A	P35499	1836 aa		27.71	■■■□□ 2.03
CD164-208	ENST00000506649	ZNF541	Q9H0D2	1346 aa		27.7	■■■□□ 2.03
CD164-208	ENST00000506649	PPEF1	O14829	653 aa	Predicted RBP	27.7	■■■□□ 2.02
CD164-208	ENST00000506649	ANXA1	P04083	346 aa		27.7	■■■□□ 2.02
CD164-208	ENST00000506649	XAGE3	Q8WTP9	111 aa		27.7	■■■□□ 2.02
CD164-208	ENST00000506649	HACL1	Q9UJ83	578 aa		27.7	■■■□□ 2.02
CD164-208	ENST00000506649	KRT24	Q2M2I5	525 aa		27.69	■■■□□ 2.02
CD164-208	ENST00000506649	GPC2	Q8N158	579 aa		27.69	■■■□□ 2.02
CD164-208	ENST00000506649	LAS1L	Q9Y4W2	734 aa	Known RBP	27.69	■■■□□ 2.02
CD164-208	ENST00000506649	AIMP1	Q12904	312 aa	Known RBP	27.68	■■■□□ 2.02
CD164-208	ENST00000506649	TCIRG1	Q13488	830 aa		27.68	■■■□□ 2.02
CD164-208	ENST00000506649	NECTIN2	Q92692	538 aa		27.68	■■■□□ 2.02
CD164-208	ENST00000506649	CREBZF	Q9NS37	354 aa		27.68	■■■□□ 2.02
CD164-208	ENST00000506649	POTEI	P0CG38	1075 aa		27.67	■■■□□ 2.02
CD164-208	ENST00000506649	POTEJ	P0CG39	1038 aa		27.67	■■■□□ 2.02
CD164-208	ENST00000506649	EIF6	P56537	245 aa	Known RBP	27.67	■■■□□ 2.02
CD164-208	ENST00000506649	PNMA8A	Q86V59	439 aa	Predicted RBP	27.67	■■■□□ 2.02
CD164-208	ENST00000506649	CFAP44	Q96MT7	982 aa		27.67	■■■□□ 2.02
CD164-208	ENST00000506649	VPS33B	Q9H267	617 aa		27.67	■■■□□ 2.02
CD164-208	ENST00000506649	NLRP10	Q86W26	655 aa		27.66	■■■□□ 2.02
CD164-208	ENST00000506649	EPHX2	P34913	555 aa		27.65	■■■□□ 2.02
CD164-208	ENST00000506649	HDGFL1	Q5TGJ6	251 aa		27.65	■■■□□ 2.02
CD164-208	ENST00000506649	C3orf67	Q6ZVT6	689 aa		27.65	■■■□□ 2.02
CD164-208	ENST00000506649	ATP6V0A2	Q9Y487	856 aa		27.65	■■■□□ 2.02
CD164-208	ENST00000506649	LARGE2	Q8N3Y3	721 aa		27.64	■■■□□ 2.02
CD164-208	ENST00000506649	CHPF2	Q9P2E5	772 aa		27.64	■■■□□ 2.02
CD164-208	ENST00000506649	DBF4	Q9UBU7	674 aa	Predicted RBP	27.64	■■■□□ 2.02
CD164-208	ENST00000506649	BBOX1	O75936	387 aa		27.63	■■■□□ 2.01
CD164-208	ENST00000506649	PLBD2	Q8NHP8	589 aa		27.63	■■■□□ 2.01
CD164-208	ENST00000506649	TRMT112	Q9UI30	125 aa	Known RBP	27.63	■■■□□ 2.01
CD164-208	ENST00000506649	SH3TC1	Q8TE82	1336 aa		27.63	■■■□□ 2.01
CD164-208	ENST00000506649	CALD1	Q05682	793 aa	Known RBP	27.62	■■■□□ 2.01
CD164-208	ENST00000506649	EAPP	Q56P03	285 aa	Predicted RBP	27.62	■■■□□ 2.01
CD164-208	ENST00000506649	SUPT20H	Q8NEM7	779 aa		27.62	■■■□□ 2.01
CD164-208	ENST00000506649	PASK	Q96RG2	1323 aa		27.62	■■■□□ 2.01
CD164-208	ENST00000506649	CCDC184	Q52MB2	194 aa		27.61	■■■□□ 2.01
CD164-208	ENST00000506649	HYPK	Q9NX55	129 aa		27.61	■■■□□ 2.01
CD164-208	ENST00000506649	ABCC4	O15439	1325 aa		27.61	■■■□□ 2.01
CD164-208	ENST00000506649	TCERG1	O14776	1098 aa	Known RBP	27.6	■■■□□ 2.01
CD164-208	ENST00000506649	ANKRD13D	Q6ZTN6	518 aa		27.6	■■■□□ 2.01
CD164-208	ENST00000506649	NIM1K	Q8IY84	436 aa		27.6	■■■□□ 2.01
CD164-208	ENST00000506649	CLEC11A	Q9Y240	323 aa		27.6	■■■□□ 2.01
CD164-208	ENST00000506649	ANKRD36C	Q5JPF3	1778 aa		27.59	■■■□□ 2.01
CD164-208	ENST00000506649	APAF1	O14727	1248 aa		27.59	■■■□□ 2.01
CD164-208	ENST00000506649	LMOD1	P29536	600 aa	Predicted RBP	27.59	■■■□□ 2.01
CD164-208	ENST00000506649	DDX46	Q7L014	1031 aa	Known RBP	27.59	■■■□□ 2.01
CD164-208	ENST00000506649	SP8	Q8IXZ3	490 aa		27.59	■■■□□ 2.01
CD164-208	ENST00000506649	ITGBL1	O95965	494 aa	Predicted RBP	27.58	■■■□□ 2.01
CD164-208	ENST00000506649	HCLS1	P14317	486 aa	Predicted RBP	27.58	■■■□□ 2.01
CD164-208	ENST00000506649	DUSP27	Q5VZP5	1158 aa		27.58	■■■□□ 2.01
CD164-208	ENST00000506649	TMC4	Q7Z404	712 aa		27.58	■■■□□ 2.01
CD164-208	ENST00000506649	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.58	■■■□□ 2.01
CD164-208	ENST00000506649	GJA3	Q9Y6H8	435 aa		27.58	■■■□□ 2.01
CD164-208	ENST00000506649	PPIP5K2	O43314	1243 aa		27.57	■■■□□ 2
CD164-208	ENST00000506649	ZNF853	P0CG23	659 aa		27.57	■■■□□ 2
CD164-208	ENST00000506649	MBIP	Q9NS73	344 aa		27.57	■■■□□ 2
CD164-208	ENST00000506649	IFT57	Q9NWB7	429 aa		27.57	■■■□□ 2
CD164-208	ENST00000506649	ZEB1	P37275	1124 aa	Predicted RBP	27.56	■■■□□ 2
CD164-208	ENST00000506649	GNAI1	P63096	354 aa		27.56	■■■□□ 2
CD164-208	ENST00000506649	GRAP	Q13588	217 aa		27.56	■■■□□ 2
CD164-208	ENST00000506649	GRAPL	Q8TC17	118 aa	Predicted RBP	27.56	■■■□□ 2
CD164-208	ENST00000506649	CHMP4A	Q9BY43	222 aa		27.56	■■■□□ 2
CD164-208	ENST00000506649	TMEM88B	A6NKF7	163 aa		27.55	■■■□□ 2
CD164-208	ENST00000506649	DPP8	Q6V1X1	898 aa	Predicted RBP	27.55	■■■□□ 2
CD164-208	ENST00000506649	ISCA1	Q9BUE6	129 aa		27.55	■■■□□ 2
CD164-208	ENST00000506649	COL4A5	P29400	1685 aa		27.55	■■■□□ 2
CD164-208	ENST00000506649	CNTROB	Q8N137	903 aa		27.54	■■■□□ 2
CD164-208	ENST00000506649	MPND	Q8N594	471 aa		27.54	■■■□□ 2
CD164-208	ENST00000506649	ADAMTSL1	Q8N6G6	1762 aa		27.53	■■■□□ 2
CD164-208	ENST00000506649	HSPA1A	P0DMV8	641 aa	Known RBP	27.53	■■■□□ 2
CD164-208	ENST00000506649	HSPA1B	P0DMV9	641 aa	Known RBP	27.53	■■■□□ 2
CD164-208	ENST00000506649	TRIM28	Q13263	835 aa	Known RBP	27.53	■■■□□ 2
CD164-208	ENST00000506649	AOC3	Q16853	763 aa		27.53	■■■□□ 2
CD164-208	ENST00000506649	SLC51A	Q86UW1	340 aa		27.53	■■■□□ 2
CD164-208	ENST00000506649	MKRN1	Q9UHC7	482 aa	Known RBP	27.53	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms