RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 ZNF428Q96B54 188 aa21.87■■□□□ 1.09
PDLIM7-215ENST00000506161 PDZRN3Q9UPQ7 1066 aa21.87■■□□□ 1.09
PDLIM7-215ENST00000506161 SNED1Q8TER0 1413 aa21.87■■□□□ 1.09
PDLIM7-215ENST00000506161 LMNB1P20700 586 aa21.86■■□□□ 1.09
PDLIM7-215ENST00000506161 CNKSR1Q969H4 720 aa21.86■■□□□ 1.09
PDLIM7-215ENST00000506161 NPR1P16066 1061 aa21.85■■□□□ 1.09
PDLIM7-215ENST00000506161 SYNE4Q8N205 404 aa21.85■■□□□ 1.09
PDLIM7-215ENST00000506161 IBTKQ9P2D0 1353 aaPredicted RBP21.85■■□□□ 1.09
PDLIM7-215ENST00000506161 COL4A1P02462 1669 aa21.85■■□□□ 1.09
PDLIM7-215ENST00000506161 PCNTO95613 3336 aa21.84■■□□□ 1.09
PDLIM7-215ENST00000506161 RIC1Q4ADV7 1423 aa21.84■■□□□ 1.09
PDLIM7-215ENST00000506161 CRY2Q49AN0 593 aa21.84■■□□□ 1.09
PDLIM7-215ENST00000506161 DUSP27Q5VZP5 1158 aa21.84■■□□□ 1.09
PDLIM7-215ENST00000506161 DDX21Q9NR30 783 aaKnown RBP eCLIP21.84■■□□□ 1.09
PDLIM7-215ENST00000506161 COL4A5P29400 1685 aa21.83■■□□□ 1.09
PDLIM7-215ENST00000506161 HDGFL1Q5TGJ6 251 aa21.83■■□□□ 1.09
PDLIM7-215ENST00000506161 LTBP3Q9NS15 1303 aa21.81■■□□□ 1.08
PDLIM7-215ENST00000506161 ZC3H4Q9UPT8 1303 aaKnown RBP21.81■■□□□ 1.08
PDLIM7-215ENST00000506161 ELL2O00472 640 aaPredicted RBP21.81■■□□□ 1.08
PDLIM7-215ENST00000506161 C8orf58Q8NAV2 365 aa21.81■■□□□ 1.08
PDLIM7-215ENST00000506161 IFT57Q9NWB7 429 aa21.81■■□□□ 1.08
PDLIM7-215ENST00000506161 POTECB2RU33 542 aa21.8■■□□□ 1.08
PDLIM7-215ENST00000506161 GTF2E1P29083 439 aaPredicted RBP21.8■■□□□ 1.08
PDLIM7-215ENST00000506161 NLRP10Q86W26 655 aa21.8■■□□□ 1.08
PDLIM7-215ENST00000506161 NYXQ9GZU5 481 aa21.8■■□□□ 1.08
PDLIM7-215ENST00000506161 VEGFAP15692 232 aaPredicted RBP21.79■■□□□ 1.08
PDLIM7-215ENST00000506161 TSPYL6Q8N831 410 aa21.79■■□□□ 1.08
PDLIM7-215ENST00000506161 TAOK3Q9H2K8 898 aa21.79■■□□□ 1.08
PDLIM7-215ENST00000506161 MRS2Q9HD23 443 aa21.79■■□□□ 1.08
PDLIM7-215ENST00000506161 HOXB7P09629 217 aa21.78■■□□□ 1.08
PDLIM7-215ENST00000506161 TSR2Q969E8 191 aaKnown RBP21.78■■□□□ 1.08
PDLIM7-215ENST00000506161 PHAXQ9H814 394 aaKnown RBP21.78■■□□□ 1.08
PDLIM7-215ENST00000506161 GLTPD2A6NH11 291 aa21.77■■□□□ 1.08
PDLIM7-215ENST00000506161 GNAI1P63096 354 aa21.77■■□□□ 1.08
PDLIM7-215ENST00000506161 TCIRG1Q13488 830 aa21.77■■□□□ 1.08
PDLIM7-215ENST00000506161 PARP10Q53GL7 1025 aa21.77■■□□□ 1.08
PDLIM7-215ENST00000506161 HOXA10P31260 410 aaPredicted RBP21.76■■□□□ 1.07
PDLIM7-215ENST00000506161 CCDC93Q567U6 631 aa21.76■■□□□ 1.07
PDLIM7-215ENST00000506161 ZNF277Q9NRM2 450 aaPredicted RBP21.76■■□□□ 1.07
PDLIM7-215ENST00000506161 ANP32CO43423 234 aa21.75■■□□□ 1.07
PDLIM7-215ENST00000506161 HCLS1P14317 486 aaPredicted RBP21.75■■□□□ 1.07
PDLIM7-215ENST00000506161 PPP1R42Q7Z4L9 355 aa21.75■■□□□ 1.07
PDLIM7-215ENST00000506161 WWC1Q8IX03 1113 aa21.75■■□□□ 1.07
PDLIM7-215ENST00000506161 UTP14AQ9BVJ6 771 aaKnown RBP21.75■■□□□ 1.07
PDLIM7-215ENST00000506161 ATP5J2-PTCD1G3V325 749 aa21.74■■□□□ 1.07
PDLIM7-215ENST00000506161 SLC10A5Q5PT55 438 aa21.74■■□□□ 1.07
PDLIM7-215ENST00000506161 PLBD2Q8NHP8 589 aa21.74■■□□□ 1.07
PDLIM7-215ENST00000506161 ISCA1Q9BUE6 129 aa21.74■■□□□ 1.07
PDLIM7-215ENST00000506161 DBF4Q9UBU7 674 aaPredicted RBP21.74■■□□□ 1.07
PDLIM7-215ENST00000506161 TCERG1O14776 1098 aaKnown RBP21.73■■□□□ 1.07
PDLIM7-215ENST00000506161 ALDH1B1P30837 517 aa21.73■■□□□ 1.07
PDLIM7-215ENST00000506161 FKBP4Q02790 459 aaKnown RBP eCLIP21.73■■□□□ 1.07
PDLIM7-215ENST00000506161 LRRC37AA6NMS7 1700 aa21.72■■□□□ 1.07
PDLIM7-215ENST00000506161 DDNO94850 711 aaPredicted RBP21.72■■□□□ 1.07
PDLIM7-215ENST00000506161 ANKRD13DQ6ZTN6 518 aa21.72■■□□□ 1.07
PDLIM7-215ENST00000506161 RPGRQ92834 1020 aaKnown RBP21.72■■□□□ 1.07
PDLIM7-215ENST00000506161 ZNF541Q9H0D2 1346 aa21.72■■□□□ 1.07
PDLIM7-215ENST00000506161 CCDC27Q2M243 656 aa21.71■■□□□ 1.07
PDLIM7-215ENST00000506161 SOGA3Q5TF21 947 aa21.71■■□□□ 1.07
PDLIM7-215ENST00000506161 CRAMP1Q96RY5 1269 aa21.71■■□□□ 1.07
PDLIM7-215ENST00000506161 SALL2Q9Y467 1007 aaPredicted RBP21.71■■□□□ 1.07
PDLIM7-215ENST00000506161 ABCC4O15439 1325 aa21.71■■□□□ 1.07
PDLIM7-215ENST00000506161 LTBP1Q14766 1721 aa21.71■■□□□ 1.07
PDLIM7-215ENST00000506161 HSP90AB3PQ58FF7 597 aa21.7■■□□□ 1.06
PDLIM7-215ENST00000506161 HYPKQ9NX55 129 aa21.7■■□□□ 1.06
PDLIM7-215ENST00000506161 TRMT112Q9UI30 125 aaKnown RBP21.7■■□□□ 1.06
PDLIM7-215ENST00000506161 DUOX1Q9NRD9 1551 aa21.7■■□□□ 1.06
PDLIM7-215ENST00000506161 SCN4AP35499 1836 aa21.69■■□□□ 1.06
PDLIM7-215ENST00000506161 SLC34A2O95436 690 aa21.69■■□□□ 1.06
PDLIM7-215ENST00000506161 CALD1Q05682 793 aaKnown RBP21.69■■□□□ 1.06
PDLIM7-215ENST00000506161 NLRP3Q96P20 1036 aa21.69■■□□□ 1.06
PDLIM7-215ENST00000506161 SPINK5Q9NQ38 1064 aaPredicted RBP21.69■■□□□ 1.06
PDLIM7-215ENST00000506161 PPEF1O14829 653 aaPredicted RBP21.68■■□□□ 1.06
PDLIM7-215ENST00000506161 POTEIP0CG38 1075 aa21.68■■□□□ 1.06
PDLIM7-215ENST00000506161 POTEJP0CG39 1038 aa21.68■■□□□ 1.06
PDLIM7-215ENST00000506161 RTL5Q5HYW3 569 aaPredicted RBP21.68■■□□□ 1.06
PDLIM7-215ENST00000506161 FAM89AQ96GI7 184 aa21.68■■□□□ 1.06
PDLIM7-215ENST00000506161 RBM17Q96I25 401 aaKnown RBP21.68■■□□□ 1.06
PDLIM7-215ENST00000506161 SH3TC1Q8TE82 1336 aa21.67■■□□□ 1.06
PDLIM7-215ENST00000506161 IARSP41252 1262 aaKnown RBP21.67■■□□□ 1.06
PDLIM7-215ENST00000506161 CREBZFQ9NS37 354 aa21.67■■□□□ 1.06
PDLIM7-215ENST00000506161 ADAMTSL1Q8N6G6 1762 aa21.66■■□□□ 1.06
PDLIM7-215ENST00000506161 RNF123Q5XPI4 1314 aa21.66■■□□□ 1.06
PDLIM7-215ENST00000506161 G2E3Q7L622 706 aa21.66■■□□□ 1.06
PDLIM7-215ENST00000506161 RTKN2Q8IZC4 609 aa21.66■■□□□ 1.06
PDLIM7-215ENST00000506161 JARID2Q92833 1246 aaPredicted RBP21.66■■□□□ 1.06
PDLIM7-215ENST00000506161 SPEF2Q9C093 1822 aa21.65■■□□□ 1.06
PDLIM7-215ENST00000506161 DPY19L2Q6NUT2 758 aa21.65■■□□□ 1.06
PDLIM7-215ENST00000506161 PSMD1Q99460 953 aa21.65■■□□□ 1.06
PDLIM7-215ENST00000506161 MKRN1Q9UHC7 482 aaKnown RBP21.65■■□□□ 1.06
PDLIM7-215ENST00000506161 FANCIQ9NVI1 1328 aa21.64■■□□□ 1.05
PDLIM7-215ENST00000506161 FAM9BQ8IZU0 186 aa21.64■■□□□ 1.05
PDLIM7-215ENST00000506161 MYD88Q99836 296 aa21.64■■□□□ 1.05
PDLIM7-215ENST00000506161 CACNA1FO60840 1977 aa21.64■■□□□ 1.05
PDLIM7-215ENST00000506161 MYH3P11055 1940 aa21.64■■□□□ 1.05
PDLIM7-215ENST00000506161 FZD9O00144 591 aa21.63■■□□□ 1.05
PDLIM7-215ENST00000506161 FOXN1O15353 648 aa21.63■■□□□ 1.05
PDLIM7-215ENST00000506161 RIC3Q7Z5B4 369 aa21.63■■□□□ 1.05
PDLIM7-215ENST00000506161 ATP6V0A2Q9Y487 856 aa21.63■■□□□ 1.05
PDLIM7-215ENST00000506161 IL16Q14005 1332 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms