RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 CHD4Q14839 1912 aa12.56□□□□□ -0.4
NR1I3-220ENST00000505005 PXDNLA1KZ92 1463 aa12.55□□□□□ -0.4
NR1I3-220ENST00000505005 RPGRQ92834 1020 aaKnown RBP12.55□□□□□ -0.4
NR1I3-220ENST00000505005 ZNF622Q969S3 477 aaKnown RBP eCLIP12.55□□□□□ -0.4
NR1I3-220ENST00000505005 RBM17Q96I25 401 aaKnown RBP12.55□□□□□ -0.4
NR1I3-220ENST00000505005 METTL22Q9BUU2 404 aaPredicted RBP12.55□□□□□ -0.4
NR1I3-220ENST00000505005 SRGNP10124 158 aa12.54□□□□□ -0.4
NR1I3-220ENST00000505005 FLIIQ13045 1269 aa12.54□□□□□ -0.4
NR1I3-220ENST00000505005 FKBP5Q13451 457 aaPredicted RBP12.54□□□□□ -0.4
NR1I3-220ENST00000505005 PROSER3Q2NL68 480 aa12.54□□□□□ -0.4
NR1I3-220ENST00000505005 NLRP10Q86W26 655 aa12.54□□□□□ -0.4
NR1I3-220ENST00000505005 TSPYL6Q8N831 410 aa12.54□□□□□ -0.4
NR1I3-220ENST00000505005 ISCA1Q9BUE6 129 aa12.54□□□□□ -0.4
NR1I3-220ENST00000505005 CWC25Q9NXE8 425 aaPredicted RBP12.54□□□□□ -0.4
NR1I3-220ENST00000505005 PTPRCP08575 1304 aa12.54□□□□□ -0.4
NR1I3-220ENST00000505005 MYCNP04198 464 aaPredicted RBP12.53□□□□□ -0.4
NR1I3-220ENST00000505005 GPTP24298 496 aa12.53□□□□□ -0.4
NR1I3-220ENST00000505005 HNRNPUQ00839 825 aaKnown RBP eCLIP12.53□□□□□ -0.4
NR1I3-220ENST00000505005 SUSD4Q5VX71 490 aa12.53□□□□□ -0.4
NR1I3-220ENST00000505005 TRMT2AQ8IZ69 625 aaKnown RBP12.53□□□□□ -0.4
NR1I3-220ENST00000505005 ZBTB38Q8NAP3 1195 aaPredicted RBP12.53□□□□□ -0.4
NR1I3-220ENST00000505005 CRAMP1Q96RY5 1269 aa12.53□□□□□ -0.4
NR1I3-220ENST00000505005 ANKRD36CQ5JPF3 1778 aa12.53□□□□□ -0.4
NR1I3-220ENST00000505005 PI4KAP2A4QPH2 592 aa12.52□□□□□ -0.41
NR1I3-220ENST00000505005 IPO8O15397 1037 aaKnown RBP12.52□□□□□ -0.41
NR1I3-220ENST00000505005 BBOX1O75936 387 aa12.52□□□□□ -0.41
NR1I3-220ENST00000505005 NTSR2O95665 410 aa12.52□□□□□ -0.41
NR1I3-220ENST00000505005 ANXA1P04083 346 aa12.52□□□□□ -0.41
NR1I3-220ENST00000505005 KCNA3P22001 575 aa12.52□□□□□ -0.41
NR1I3-220ENST00000505005 HOXA10P31260 410 aaPredicted RBP12.52□□□□□ -0.41
NR1I3-220ENST00000505005 CRY2Q49AN0 593 aa12.52□□□□□ -0.41
NR1I3-220ENST00000505005 RTKN2Q8IZC4 609 aa12.52□□□□□ -0.41
NR1I3-220ENST00000505005 PI4KAP1Q8N8J0 262 aa12.52□□□□□ -0.41
NR1I3-220ENST00000505005 LINS1Q8NG48 757 aa12.52□□□□□ -0.41
NR1I3-220ENST00000505005 DNAAF4Q8WXU2 420 aa12.52□□□□□ -0.41
NR1I3-220ENST00000505005 PHAXQ9H814 394 aaKnown RBP12.52□□□□□ -0.41
NR1I3-220ENST00000505005 ARFGEF1Q9Y6D6 1849 aa12.52□□□□□ -0.41
NR1I3-220ENST00000505005 ZC3H4Q9UPT8 1303 aaKnown RBP12.52□□□□□ -0.41
NR1I3-220ENST00000505005 PCCAP05165 728 aaPredicted RBP12.51□□□□□ -0.41
NR1I3-220ENST00000505005 YY1P25490 414 aa12.51□□□□□ -0.41
NR1I3-220ENST00000505005 BRPF1P55201 1214 aaPredicted RBP12.51□□□□□ -0.41
NR1I3-220ENST00000505005 ARHGAP27Q6ZUM4 889 aa12.51□□□□□ -0.41
NR1I3-220ENST00000505005 DDX46Q7L014 1031 aaKnown RBP12.51□□□□□ -0.41
NR1I3-220ENST00000505005 VPS33BQ9H267 617 aa12.51□□□□□ -0.41
NR1I3-220ENST00000505005 MAP3K2Q9Y2U5 619 aa12.51□□□□□ -0.41
NR1I3-220ENST00000505005 ZBED9Q6R2W3 1325 aa12.51□□□□□ -0.41
NR1I3-220ENST00000505005 FAM177BA6PVY3 158 aa12.5□□□□□ -0.41
NR1I3-220ENST00000505005 ALDH1L1O75891 902 aa12.5□□□□□ -0.41
NR1I3-220ENST00000505005 CHRNA5P30532 468 aa12.5□□□□□ -0.41
NR1I3-220ENST00000505005 ERFEQ4G0M1 354 aa12.5□□□□□ -0.41
NR1I3-220ENST00000505005 MYD88Q99836 296 aa12.5□□□□□ -0.41
NR1I3-220ENST00000505005 UBN2Q6ZU65 1347 aa12.5□□□□□ -0.41
NR1I3-220ENST00000505005 N4BP2Q86UW6 1770 aaPredicted RBP12.5□□□□□ -0.41
NR1I3-220ENST00000505005 DLEC1Q9Y238 1755 aa12.5□□□□□ -0.41
NR1I3-220ENST00000505005 BRCA1P38398 1863 aaKnown RBP12.49□□□□□ -0.41
NR1I3-220ENST00000505005 KIF16BQ96L93 1317 aa12.49□□□□□ -0.41
NR1I3-220ENST00000505005 CDHR2Q9BYE9 1310 aa12.49□□□□□ -0.41
NR1I3-220ENST00000505005 LTBP3Q9NS15 1303 aa12.49□□□□□ -0.41
NR1I3-220ENST00000505005 PDE8AO60658 829 aa12.49□□□□□ -0.41
NR1I3-220ENST00000505005 YBX3P16989 372 aaKnown RBP eCLIP12.49□□□□□ -0.41
NR1I3-220ENST00000505005 SF3B3Q15393 1217 aaKnown RBP12.49□□□□□ -0.41
NR1I3-220ENST00000505005 CCDC152Q4G0S7 254 aa12.49□□□□□ -0.41
NR1I3-220ENST00000505005 CCDC93Q567U6 631 aa12.49□□□□□ -0.41
NR1I3-220ENST00000505005 SUPT20HQ8NEM7 779 aa12.49□□□□□ -0.41
NR1I3-220ENST00000505005 IRS4O14654 1257 aaPredicted RBP12.48□□□□□ -0.41
NR1I3-220ENST00000505005 NUTM1Q86Y26 1132 aa12.48□□□□□ -0.41
NR1I3-220ENST00000505005 ARHGAP45Q92619 1136 aa12.48□□□□□ -0.41
NR1I3-220ENST00000505005 API5Q9BZZ5 524 aaKnown RBP12.48□□□□□ -0.41
NR1I3-220ENST00000505005 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
NR1I3-220ENST00000505005 ARFGEF2Q9Y6D5 1785 aa12.48□□□□□ -0.41
NR1I3-220ENST00000505005 ATP5J2-PTCD1G3V325 749 aa12.47□□□□□ -0.41
NR1I3-220ENST00000505005 MS4A1P11836 297 aa12.47□□□□□ -0.41
NR1I3-220ENST00000505005 LMNB1P20700 586 aa12.47□□□□□ -0.41
NR1I3-220ENST00000505005 PRPF40BQ6NWY9 871 aaKnown RBP12.47□□□□□ -0.41
NR1I3-220ENST00000505005 SRCIN1Q9C0H9 1055 aa12.47□□□□□ -0.41
NR1I3-220ENST00000505005 SMC4Q9NTJ3 1288 aa12.47□□□□□ -0.41
NR1I3-220ENST00000505005 KIAA1551Q9HCM1 1747 aa12.46□□□□□ -0.41
NR1I3-220ENST00000505005 NEURL1BA8MQ27 555 aa12.46□□□□□ -0.41
NR1I3-220ENST00000505005 DPY19L2Q6NUT2 758 aa12.46□□□□□ -0.41
NR1I3-220ENST00000505005 CDC5LQ99459 802 aaKnown RBP12.46□□□□□ -0.41
NR1I3-220ENST00000505005 TAOK3Q9H2K8 898 aa12.46□□□□□ -0.41
NR1I3-220ENST00000505005 C9orf78Q9NZ63 289 aaPredicted RBP12.46□□□□□ -0.41
NR1I3-220ENST00000505005 ANKRD31Q8N7Z5 1873 aa12.46□□□□□ -0.42
NR1I3-220ENST00000505005 SENP3-EIF4A1A0A087X0R7 540 aa12.45□□□□□ -0.42
NR1I3-220ENST00000505005 CCT4P50991 539 aaKnown RBP12.45□□□□□ -0.42
NR1I3-220ENST00000505005 GRAPQ13588 217 aa12.45□□□□□ -0.42
NR1I3-220ENST00000505005 GCKRQ14397 625 aa12.45□□□□□ -0.42
NR1I3-220ENST00000505005 SP8Q8IXZ3 490 aa12.45□□□□□ -0.42
NR1I3-220ENST00000505005 MRPL50Q8N5N7 158 aaKnown RBP12.45□□□□□ -0.42
NR1I3-220ENST00000505005 GRAPLQ8TC17 118 aaPredicted RBP12.45□□□□□ -0.42
NR1I3-220ENST00000505005 FAM89AQ96GI7 184 aa12.45□□□□□ -0.42
NR1I3-220ENST00000505005 PSMD1Q99460 953 aa12.45□□□□□ -0.42
NR1I3-220ENST00000505005 PLA2G12BQ9BX93 195 aa12.45□□□□□ -0.42
NR1I3-220ENST00000505005 ADCY9O60503 1353 aa12.44□□□□□ -0.42
NR1I3-220ENST00000505005 KDM2BQ8NHM5 1336 aa12.44□□□□□ -0.42
NR1I3-220ENST00000505005 H7C1W4 665 aa12.44□□□□□ -0.42
NR1I3-220ENST00000505005 C21orf2O43822 256 aa12.44□□□□□ -0.42
NR1I3-220ENST00000505005 CDCA7LQ96GN5 454 aa12.44□□□□□ -0.42
NR1I3-220ENST00000505005 PPEF1O14829 653 aaPredicted RBP12.43□□□□□ -0.42
NR1I3-220ENST00000505005 RPS8P62241 208 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms