RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 SLC51AQ86UW1 340 aa17.35■□□□□ 0.37
DDX41-204ENST00000504807 NGEFQ8N5V2 710 aa17.35■□□□□ 0.37
DDX41-204ENST00000504807 CACNA1SQ13698 1873 aa17.35■□□□□ 0.37
DDX41-204ENST00000504807 FAM177BA6PVY3 158 aa17.34■□□□□ 0.37
DDX41-204ENST00000504807 SRGNP10124 158 aa17.34■□□□□ 0.37
DDX41-204ENST00000504807 PDIA6Q15084 440 aa17.34■□□□□ 0.37
DDX41-204ENST00000504807 KRT24Q2M2I5 525 aa17.34■□□□□ 0.37
DDX41-204ENST00000504807 PNISRQ8TF01 805 aaKnown RBP17.34■□□□□ 0.37
DDX41-204ENST00000504807 CNKSR1Q969H4 720 aa17.34■□□□□ 0.37
DDX41-204ENST00000504807 THSD7BQ9C0I4 1608 aa17.34■□□□□ 0.37
DDX41-204ENST00000504807 TRIM35Q9UPQ4 493 aa17.34■□□□□ 0.37
DDX41-204ENST00000504807 PDZRN3Q9UPQ7 1066 aa17.34■□□□□ 0.37
DDX41-204ENST00000504807 ADAMTSL1Q8N6G6 1762 aa17.33■□□□□ 0.37
DDX41-204ENST00000504807 ABCC12Q96J65 1359 aa17.33■□□□□ 0.36
DDX41-204ENST00000504807 MYL6BP14649 208 aa17.33■□□□□ 0.36
DDX41-204ENST00000504807 PROSER3Q2NL68 480 aa17.33■□□□□ 0.36
DDX41-204ENST00000504807 SOGA3Q5TF21 947 aa17.33■□□□□ 0.36
DDX41-204ENST00000504807 CLEC4GQ6UXB4 293 aa17.33■□□□□ 0.36
DDX41-204ENST00000504807 PRKRIP1Q9H875 184 aaPredicted RBP17.33■□□□□ 0.36
DDX41-204ENST00000504807 ZNF277Q9NRM2 450 aaPredicted RBP17.33■□□□□ 0.36
DDX41-204ENST00000504807 ADAMTS8Q9UP79 889 aa17.33■□□□□ 0.36
DDX41-204ENST00000504807 NIP7Q9Y221 180 aaKnown RBP eCLIP17.33■□□□□ 0.36
DDX41-204ENST00000504807 ARFGEF2Q9Y6D5 1785 aa17.33■□□□□ 0.36
DDX41-204ENST00000504807 LTBP1Q14766 1721 aa17.33■□□□□ 0.36
DDX41-204ENST00000504807 UBN2Q6ZU65 1347 aa17.32■□□□□ 0.36
DDX41-204ENST00000504807 ANXA1P04083 346 aa17.32■□□□□ 0.36
DDX41-204ENST00000504807 NEFMP07197 916 aa17.32■□□□□ 0.36
DDX41-204ENST00000504807 NEUROD2Q15784 382 aa17.32■□□□□ 0.36
DDX41-204ENST00000504807 OLFM4Q6UX06 510 aa17.32■□□□□ 0.36
DDX41-204ENST00000504807 NBPF5PQ86XG9 351 aaPredicted RBP17.32■□□□□ 0.36
DDX41-204ENST00000504807 TSPYL4Q9UJ04 414 aa17.32■□□□□ 0.36
DDX41-204ENST00000504807 CA12O43570 354 aa17.31■□□□□ 0.36
DDX41-204ENST00000504807 MAP2K2P36507 400 aa17.31■□□□□ 0.36
DDX41-204ENST00000504807 NUP98P52948 1817 aa17.31■□□□□ 0.36
DDX41-204ENST00000504807 KLRG2A4D1S0 409 aaPredicted RBP17.3■□□□□ 0.36
DDX41-204ENST00000504807 TRAF5O00463 557 aa17.3■□□□□ 0.36
DDX41-204ENST00000504807 CCDC184Q52MB2 194 aa17.3■□□□□ 0.36
DDX41-204ENST00000504807 CST9Q5W186 159 aa17.3■□□□□ 0.36
DDX41-204ENST00000504807 STYK1Q6J9G0 422 aa17.3■□□□□ 0.36
DDX41-204ENST00000504807 NPM2Q86SE8 214 aaKnown RBP17.3■□□□□ 0.36
DDX41-204ENST00000504807 C7orf43Q8WVR3 580 aa17.3■□□□□ 0.36
DDX41-204ENST00000504807 ZBTB3Q9H5J0 574 aa17.3■□□□□ 0.36
DDX41-204ENST00000504807 MAP3K15Q6ZN16 1313 aa17.29■□□□□ 0.36
DDX41-204ENST00000504807 NPHP1O15259 732 aa17.29■□□□□ 0.36
DDX41-204ENST00000504807 ST5P78524 1137 aa17.29■□□□□ 0.36
DDX41-204ENST00000504807 CCDC93Q567U6 631 aa17.29■□□□□ 0.36
DDX41-204ENST00000504807 NUTM1Q86Y26 1132 aa17.29■□□□□ 0.36
DDX41-204ENST00000504807 PNNQ9H307 717 aaKnown RBP17.29■□□□□ 0.36
DDX41-204ENST00000504807 TLL2Q9Y6L7 1015 aa17.29■□□□□ 0.36
DDX41-204ENST00000504807 RGL2O15211 777 aa17.28■□□□□ 0.36
DDX41-204ENST00000504807 GPTP24298 496 aa17.28■□□□□ 0.36
DDX41-204ENST00000504807 NECTIN2Q92692 538 aa17.28■□□□□ 0.36
DDX41-204ENST00000504807 ZNF652Q9Y2D9 606 aa17.28■□□□□ 0.36
DDX41-204ENST00000504807 CASP8AP2Q9UKL3 1982 aa17.28■□□□□ 0.36
DDX41-204ENST00000504807 CHL1O00533 1208 aa17.27■□□□□ 0.36
DDX41-204ENST00000504807 EIF2S2P20042 333 aaKnown RBP17.27■□□□□ 0.36
DDX41-204ENST00000504807 FKBP4Q02790 459 aaKnown RBP eCLIP17.27■□□□□ 0.36
DDX41-204ENST00000504807 SUSD4Q5VX71 490 aa17.27■□□□□ 0.36
DDX41-204ENST00000504807 C3orf67Q6ZVT6 689 aa17.27■□□□□ 0.36
DDX41-204ENST00000504807 RUNDC1Q96C34 613 aa17.27■□□□□ 0.36
DDX41-204ENST00000504807 MASTLQ96GX5 879 aa17.27■□□□□ 0.36
DDX41-204ENST00000504807 SNED1Q8TER0 1413 aa17.27■□□□□ 0.35
DDX41-204ENST00000504807 ERVV-1B6SEH8 477 aa17.26■□□□□ 0.35
DDX41-204ENST00000504807 ZNF34Q8IZ26 560 aa17.26■□□□□ 0.35
DDX41-204ENST00000504807 GPC2Q8N158 579 aa17.26■□□□□ 0.35
DDX41-204ENST00000504807 GJA3Q9Y6H8 435 aa17.26■□□□□ 0.35
DDX41-204ENST00000504807 FZD9O00144 591 aa17.25■□□□□ 0.35
DDX41-204ENST00000504807 BRPF1P55201 1214 aaPredicted RBP17.25■□□□□ 0.35
DDX41-204ENST00000504807 CIAPIN1Q6FI81 312 aa17.25■□□□□ 0.35
DDX41-204ENST00000504807 TPTE2Q6XPS3 522 aa17.25■□□□□ 0.35
DDX41-204ENST00000504807 NTSR2O95665 410 aa17.24■□□□□ 0.35
DDX41-204ENST00000504807 LMOD1P29536 600 aaPredicted RBP17.24■□□□□ 0.35
DDX41-204ENST00000504807 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
DDX41-204ENST00000504807 ERBB4Q15303 1308 aa17.23■□□□□ 0.35
DDX41-204ENST00000504807 COL4A5P29400 1685 aa17.23■□□□□ 0.35
DDX41-204ENST00000504807 NPR1P16066 1061 aa17.23■□□□□ 0.35
DDX41-204ENST00000504807 IARSP41252 1262 aaKnown RBP17.23■□□□□ 0.35
DDX41-204ENST00000504807 CRY2Q49AN0 593 aa17.23■□□□□ 0.35
DDX41-204ENST00000504807 GIGYF2Q6Y7W6 1299 aaKnown RBP17.23■□□□□ 0.35
DDX41-204ENST00000504807 KIF6Q6ZMV9 814 aa17.23■□□□□ 0.35
DDX41-204ENST00000504807 SAPCD2Q86UD0 394 aa17.23■□□□□ 0.35
DDX41-204ENST00000504807 ZNF428Q96B54 188 aa17.23■□□□□ 0.35
DDX41-204ENST00000504807 BABAM1Q9NWV8 329 aa17.23■□□□□ 0.35
DDX41-204ENST00000504807 LAS1LQ9Y4W2 734 aaKnown RBP17.23■□□□□ 0.35
DDX41-204ENST00000504807 EPS15P42566 896 aa17.22■□□□□ 0.35
DDX41-204ENST00000504807 LMOD3Q0VAK6 560 aa17.22■□□□□ 0.35
DDX41-204ENST00000504807 SYNE4Q8N205 404 aa17.22■□□□□ 0.35
DDX41-204ENST00000504807 APAF1O14727 1248 aa17.21■□□□□ 0.35
DDX41-204ENST00000504807 CELF2O95319 508 aaKnown RBP17.21■□□□□ 0.35
DDX41-204ENST00000504807 XAGE3Q8WTP9 111 aa17.21■□□□□ 0.35
DDX41-204ENST00000504807 RIC1Q4ADV7 1423 aa17.21■□□□□ 0.34
DDX41-204ENST00000504807 IBTKQ9P2D0 1353 aaPredicted RBP17.2■□□□□ 0.34
DDX41-204ENST00000504807 ZNF853P0CG23 659 aa17.2■□□□□ 0.34
DDX41-204ENST00000504807 COPS6Q7L5N1 327 aa17.2■□□□□ 0.34
DDX41-204ENST00000504807 RTKN2Q8IZC4 609 aa17.2■□□□□ 0.34
DDX41-204ENST00000504807 JDP2Q8WYK2 163 aa17.2■□□□□ 0.34
DDX41-204ENST00000504807 ZIC5Q96T25 663 aa17.2■□□□□ 0.34
DDX41-204ENST00000504807 CHPF2Q9P2E5 772 aa17.2■□□□□ 0.34
DDX41-204ENST00000504807 ANKRD36CQ5JPF3 1778 aa17.2■□□□□ 0.34
DDX41-204ENST00000504807 COL4A1P02462 1669 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms