RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 ALDH1B1P30837 517 aa16.73■□□□□ 0.27
RNF4-206ENST00000504782 FKBP4Q02790 459 aaKnown RBP eCLIP16.73■□□□□ 0.27
RNF4-206ENST00000504782 SOGA3Q5TF21 947 aa16.73■□□□□ 0.27
RNF4-206ENST00000504782 DPY19L2Q6NUT2 758 aa16.73■□□□□ 0.27
RNF4-206ENST00000504782 SYNE4Q8N205 404 aa16.73■□□□□ 0.27
RNF4-206ENST00000504782 TAF1P21675 1872 aa16.73■□□□□ 0.27
RNF4-206ENST00000504782 IBTKQ9P2D0 1353 aaPredicted RBP16.73■□□□□ 0.27
RNF4-206ENST00000504782 APAF1O14727 1248 aa16.72■□□□□ 0.27
RNF4-206ENST00000504782 POTEIP0CG38 1075 aa16.72■□□□□ 0.27
RNF4-206ENST00000504782 POTEJP0CG39 1038 aa16.72■□□□□ 0.27
RNF4-206ENST00000504782 CHPF2Q9P2E5 772 aa16.72■□□□□ 0.27
RNF4-206ENST00000504782 COL4A5P29400 1685 aa16.72■□□□□ 0.27
RNF4-206ENST00000504782 ZNF541Q9H0D2 1346 aa16.71■□□□□ 0.27
RNF4-206ENST00000504782 RIC1Q4ADV7 1423 aa16.71■□□□□ 0.27
RNF4-206ENST00000504782 TCERG1O14776 1098 aaKnown RBP16.71■□□□□ 0.27
RNF4-206ENST00000504782 HOXA10P31260 410 aaPredicted RBP16.71■□□□□ 0.27
RNF4-206ENST00000504782 SMC1BQ8NDV3 1235 aa16.71■□□□□ 0.27
RNF4-206ENST00000504782 DDX21Q9NR30 783 aaKnown RBP eCLIP16.71■□□□□ 0.27
RNF4-206ENST00000504782 MBIPQ9NS73 344 aa16.71■□□□□ 0.27
RNF4-206ENST00000504782 PPP1R42Q7Z4L9 355 aa16.7■□□□□ 0.26
RNF4-206ENST00000504782 RTKN2Q8IZC4 609 aa16.7■□□□□ 0.26
RNF4-206ENST00000504782 RPGRQ92834 1020 aaKnown RBP16.7■□□□□ 0.26
RNF4-206ENST00000504782 CFAP44Q96MT7 982 aa16.7■□□□□ 0.26
RNF4-206ENST00000504782 ZNF853P0CG23 659 aa16.69■□□□□ 0.26
RNF4-206ENST00000504782 PARP10Q53GL7 1025 aa16.69■□□□□ 0.26
RNF4-206ENST00000504782 DUSP27Q5VZP5 1158 aa16.69■□□□□ 0.26
RNF4-206ENST00000504782 NLRP10Q86W26 655 aa16.69■□□□□ 0.26
RNF4-206ENST00000504782 UTP14AQ9BVJ6 771 aaKnown RBP16.69■□□□□ 0.26
RNF4-206ENST00000504782 DDX60Q8IY21 1712 aaKnown RBP16.68■□□□□ 0.26
RNF4-206ENST00000504782 HCLS1P14317 486 aaPredicted RBP16.68■□□□□ 0.26
RNF4-206ENST00000504782 IARSP41252 1262 aaKnown RBP16.68■□□□□ 0.26
RNF4-206ENST00000504782 TCIRG1Q13488 830 aa16.68■□□□□ 0.26
RNF4-206ENST00000504782 SLC10A5Q5PT55 438 aa16.68■□□□□ 0.26
RNF4-206ENST00000504782 HDGFL1Q5TGJ6 251 aa16.68■□□□□ 0.26
RNF4-206ENST00000504782 SCN4AP35499 1836 aa16.68■□□□□ 0.26
RNF4-206ENST00000504782 ELL2O00472 640 aaPredicted RBP16.67■□□□□ 0.26
RNF4-206ENST00000504782 RBM17Q96I25 401 aaKnown RBP16.67■□□□□ 0.26
RNF4-206ENST00000504782 CRAMP1Q96RY5 1269 aa16.67■□□□□ 0.26
RNF4-206ENST00000504782 PPEF1O14829 653 aaPredicted RBP16.66■□□□□ 0.26
RNF4-206ENST00000504782 NLRP3Q96P20 1036 aa16.66■□□□□ 0.26
RNF4-206ENST00000504782 COL4A1P02462 1669 aa16.65■□□□□ 0.26
RNF4-206ENST00000504782 FZD9O00144 591 aa16.65■□□□□ 0.26
RNF4-206ENST00000504782 IFFO2Q5TF58 517 aa16.65■□□□□ 0.26
RNF4-206ENST00000504782 KLRG1Q96E93 195 aa16.65■□□□□ 0.26
RNF4-206ENST00000504782 PSMD1Q99460 953 aa16.65■□□□□ 0.26
RNF4-206ENST00000504782 TRMT112Q9UI30 125 aaKnown RBP16.65■□□□□ 0.26
RNF4-206ENST00000504782 ABCC4O15439 1325 aa16.65■□□□□ 0.26
RNF4-206ENST00000504782 LTBP1Q14766 1721 aa16.65■□□□□ 0.26
RNF4-206ENST00000504782 ATP5J2-PTCD1G3V325 749 aa16.64■□□□□ 0.25
RNF4-206ENST00000504782 HOXB7P09629 217 aa16.64■□□□□ 0.25
RNF4-206ENST00000504782 HSP90AB3PQ58FF7 597 aa16.64■□□□□ 0.25
RNF4-206ENST00000504782 ANKRD13DQ6ZTN6 518 aa16.64■□□□□ 0.25
RNF4-206ENST00000504782 C8orf58Q8NAV2 365 aa16.64■□□□□ 0.25
RNF4-206ENST00000504782 PLBD2Q8NHP8 589 aa16.64■□□□□ 0.25
RNF4-206ENST00000504782 L3MBTL3Q96JM7 780 aaPredicted RBP16.64■□□□□ 0.25
RNF4-206ENST00000504782 PHAXQ9H814 394 aaKnown RBP16.64■□□□□ 0.25
RNF4-206ENST00000504782 DBF4Q9UBU7 674 aaPredicted RBP16.64■□□□□ 0.25
RNF4-206ENST00000504782 ISCA1Q9BUE6 129 aa16.63■□□□□ 0.25
RNF4-206ENST00000504782 TAF1DQ9H5J8 278 aaPredicted RBP16.63■□□□□ 0.25
RNF4-206ENST00000504782 IFT57Q9NWB7 429 aa16.63■□□□□ 0.25
RNF4-206ENST00000504782 ADAMTSL1Q8N6G6 1762 aa16.63■□□□□ 0.25
RNF4-206ENST00000504782 CC2D2BQ6DHV5 1058 aa16.62■□□□□ 0.25
RNF4-206ENST00000504782 CHADLQ6NUI6 762 aa16.62■□□□□ 0.25
RNF4-206ENST00000504782 FAM89AQ96GI7 184 aa16.62■□□□□ 0.25
RNF4-206ENST00000504782 ATP6V0A2Q9Y487 856 aa16.62■□□□□ 0.25
RNF4-206ENST00000504782 RNF123Q5XPI4 1314 aa16.62■□□□□ 0.25
RNF4-206ENST00000504782 GNAI1P63096 354 aa16.61■□□□□ 0.25
RNF4-206ENST00000504782 RTL5Q5HYW3 569 aaPredicted RBP16.61■□□□□ 0.25
RNF4-206ENST00000504782 TSPYL6Q8N831 410 aa16.61■□□□□ 0.25
RNF4-206ENST00000504782 HYPKQ9NX55 129 aa16.61■□□□□ 0.25
RNF4-206ENST00000504782 SH3TC1Q8TE82 1336 aa16.61■□□□□ 0.25
RNF4-206ENST00000504782 AOC3Q16853 763 aa16.6■□□□□ 0.25
RNF4-206ENST00000504782 EAPPQ56P03 285 aaPredicted RBP16.6■□□□□ 0.25
RNF4-206ENST00000504782 LARGE2Q8N3Y3 721 aa16.6■□□□□ 0.25
RNF4-206ENST00000504782 JMYQ8N9B5 988 aa16.6■□□□□ 0.25
RNF4-206ENST00000504782 JDP2Q8WYK2 163 aa16.6■□□□□ 0.25
RNF4-206ENST00000504782 IQCA1LA6NCM1 817 aa16.59■□□□□ 0.25
RNF4-206ENST00000504782 TSR2Q969E8 191 aaKnown RBP16.59■□□□□ 0.25
RNF4-206ENST00000504782 HACL1Q9UJ83 578 aa16.59■□□□□ 0.25
RNF4-206ENST00000504782 GJA3Q9Y6H8 435 aa16.59■□□□□ 0.25
RNF4-206ENST00000504782 EPHX2P34913 555 aa16.58■□□□□ 0.24
RNF4-206ENST00000504782 SP8Q8IXZ3 490 aa16.58■□□□□ 0.24
RNF4-206ENST00000504782 GPC2Q8N158 579 aa16.58■□□□□ 0.24
RNF4-206ENST00000504782 DUOX1Q9NRD9 1551 aa16.58■□□□□ 0.24
RNF4-206ENST00000504782 LRRC37AA6NMS7 1700 aa16.58■□□□□ 0.24
RNF4-206ENST00000504782 PPIP5K2O43314 1243 aa16.57■□□□□ 0.24
RNF4-206ENST00000504782 BBOX1O75936 387 aa16.57■□□□□ 0.24
RNF4-206ENST00000504782 EIF6P56537 245 aaKnown RBP16.57■□□□□ 0.24
RNF4-206ENST00000504782 GRAPQ13588 217 aa16.57■□□□□ 0.24
RNF4-206ENST00000504782 DDX46Q7L014 1031 aaKnown RBP16.57■□□□□ 0.24
RNF4-206ENST00000504782 RIC3Q7Z5B4 369 aa16.57■□□□□ 0.24
RNF4-206ENST00000504782 LDHDQ86WU2 507 aa16.57■□□□□ 0.24
RNF4-206ENST00000504782 GRAPLQ8TC17 118 aaPredicted RBP16.57■□□□□ 0.24
RNF4-206ENST00000504782 JARID2Q92833 1246 aaPredicted RBP16.57■□□□□ 0.24
RNF4-206ENST00000504782 CELF1Q92879 486 aaKnown RBP16.57■□□□□ 0.24
RNF4-206ENST00000504782 PASKQ96RG2 1323 aa16.56■□□□□ 0.24
RNF4-206ENST00000504782 ZNF316A6NFI3 1004 aaPredicted RBP16.56■□□□□ 0.24
RNF4-206ENST00000504782 ITGBL1O95965 494 aaPredicted RBP16.56■□□□□ 0.24
RNF4-206ENST00000504782 EPS15P42566 896 aa16.56■□□□□ 0.24
RNF4-206ENST00000504782 SCNN1DP51172 638 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms