RNA–Protein interactions for RNA: ENST00000503495.5

DDR1-249, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-249ENST00000503495 PNMA8AQ86V59 439 aaPredicted RBP19.83■□□□□ 0.77
DDR1-249ENST00000503495 GPC2Q8N158 579 aa19.83■□□□□ 0.77
DDR1-249ENST00000503495 ZBTB3Q9H5J0 574 aa19.83■□□□□ 0.77
DDR1-249ENST00000503495 MKRN1Q9UHC7 482 aaKnown RBP19.83■□□□□ 0.77
DDR1-249ENST00000503495 MAPK8IP3Q9UPT6 1336 aa19.82■□□□□ 0.76
DDR1-249ENST00000503495 EPHX2P34913 555 aa19.82■□□□□ 0.76
DDR1-249ENST00000503495 JDP2Q8WYK2 163 aa19.82■□□□□ 0.76
DDR1-249ENST00000503495 RPGRQ92834 1020 aaKnown RBP19.82■□□□□ 0.76
DDR1-249ENST00000503495 ADAMTSL1Q8N6G6 1762 aa19.81■□□□□ 0.76
DDR1-249ENST00000503495 GPTP24298 496 aa19.81■□□□□ 0.76
DDR1-249ENST00000503495 EAPPQ56P03 285 aaPredicted RBP19.81■□□□□ 0.76
DDR1-249ENST00000503495 CRAMP1Q96RY5 1269 aa19.81■□□□□ 0.76
DDR1-249ENST00000503495 BABAM1Q9NWV8 329 aa19.81■□□□□ 0.76
DDR1-249ENST00000503495 CNTNAP1P78357 1384 aa19.81■□□□□ 0.76
DDR1-249ENST00000503495 TMEM88BA6NKF7 163 aa19.8■□□□□ 0.76
DDR1-249ENST00000503495 NTSR2O95665 410 aa19.8■□□□□ 0.76
DDR1-249ENST00000503495 LRP10Q7Z4F1 713 aa19.8■□□□□ 0.76
DDR1-249ENST00000503495 PPP1R42Q7Z4L9 355 aa19.8■□□□□ 0.76
DDR1-249ENST00000503495 RNF123Q5XPI4 1314 aa19.79■□□□□ 0.76
DDR1-249ENST00000503495 PDIA6Q15084 440 aa19.79■□□□□ 0.76
DDR1-249ENST00000503495 PARP10Q53GL7 1025 aa19.79■□□□□ 0.76
DDR1-249ENST00000503495 RBM17Q96I25 401 aaKnown RBP19.79■□□□□ 0.76
DDR1-249ENST00000503495 TSPYL4Q9UJ04 414 aa19.79■□□□□ 0.76
DDR1-249ENST00000503495 CLEC11AQ9Y240 323 aa19.79■□□□□ 0.76
DDR1-249ENST00000503495 RIPK4P57078 832 aa19.78■□□□□ 0.76
DDR1-249ENST00000503495 SLC10A5Q5PT55 438 aa19.78■□□□□ 0.76
DDR1-249ENST00000503495 EIF6P56537 245 aaKnown RBP19.77■□□□□ 0.76
DDR1-249ENST00000503495 CNTROBQ8N137 903 aa19.77■□□□□ 0.76
DDR1-249ENST00000503495 NLRP3Q96P20 1036 aa19.77■□□□□ 0.76
DDR1-249ENST00000503495 RALBP1Q15311 655 aa19.76■□□□□ 0.75
DDR1-249ENST00000503495 VPS33BQ9H267 617 aa19.76■□□□□ 0.75
DDR1-249ENST00000503495 COL4A5P29400 1685 aa19.75■□□□□ 0.75
DDR1-249ENST00000503495 PPEF1O14829 653 aaPredicted RBP19.75■□□□□ 0.75
DDR1-249ENST00000503495 EIF2S2P20042 333 aaKnown RBP19.75■□□□□ 0.75
DDR1-249ENST00000503495 MAP1SQ66K74 1059 aaPredicted RBP19.75■□□□□ 0.75
DDR1-249ENST00000503495 C3orf67Q6ZVT6 689 aa19.75■□□□□ 0.75
DDR1-249ENST00000503495 LARGE2Q8N3Y3 721 aa19.75■□□□□ 0.75
DDR1-249ENST00000503495 TMPOP42166 694 aaKnown RBP19.74■□□□□ 0.75
DDR1-249ENST00000503495 VEGFBP49765 207 aa19.74■□□□□ 0.75
DDR1-249ENST00000503495 LMOD3Q0VAK6 560 aa19.74■□□□□ 0.75
DDR1-249ENST00000503495 UTP14AQ9BVJ6 771 aaKnown RBP19.74■□□□□ 0.75
DDR1-249ENST00000503495 GJA3Q9Y6H8 435 aa19.74■□□□□ 0.75
DDR1-249ENST00000503495 ATP6V0A2Q9Y487 856 aa19.73■□□□□ 0.75
DDR1-249ENST00000503495 RASSF10A6NK89 507 aa19.72■□□□□ 0.75
DDR1-249ENST00000503495 TCERG1O14776 1098 aaKnown RBP19.72■□□□□ 0.75
DDR1-249ENST00000503495 FOXN1O15353 648 aa19.72■□□□□ 0.75
DDR1-249ENST00000503495 LMOD1P29536 600 aaPredicted RBP19.72■□□□□ 0.75
DDR1-249ENST00000503495 SCNN1DP51172 638 aa19.72■□□□□ 0.75
DDR1-249ENST00000503495 PROSER3Q2NL68 480 aa19.72■□□□□ 0.75
DDR1-249ENST00000503495 DEFB115Q30KQ5 88 aa19.72■□□□□ 0.75
DDR1-249ENST00000503495 HSP90AB3PQ58FF7 597 aa19.72■□□□□ 0.75
DDR1-249ENST00000503495 TMX4Q9H1E5 349 aaPredicted RBP19.72■□□□□ 0.75
DDR1-249ENST00000503495 ANXA1P04083 346 aa19.71■□□□□ 0.75
DDR1-249ENST00000503495 EPS15P42566 896 aa19.71■□□□□ 0.75
DDR1-249ENST00000503495 USP50Q70EL3 339 aaPredicted RBP19.71■□□□□ 0.75
DDR1-249ENST00000503495 COPS6Q7L5N1 327 aa19.71■□□□□ 0.75
DDR1-249ENST00000503495 PRDM10Q9NQV6 1147 aa19.71■□□□□ 0.75
DDR1-249ENST00000503495 LTBP1Q14766 1721 aa19.71■□□□□ 0.75
DDR1-249ENST00000503495 BBOX1O75936 387 aa19.7■□□□□ 0.74
DDR1-249ENST00000503495 SLC51AQ86UW1 340 aa19.7■□□□□ 0.74
DDR1-249ENST00000503495 NIM1KQ8IY84 436 aa19.7■□□□□ 0.74
DDR1-249ENST00000503495 RTFDC1Q9BY42 306 aaPredicted RBP19.7■□□□□ 0.74
DDR1-249ENST00000503495 DDX21Q9NR30 783 aaKnown RBP eCLIP19.7■□□□□ 0.74
DDR1-249ENST00000503495 WBP1LQ9NX94 342 aa19.7■□□□□ 0.74
DDR1-249ENST00000503495 ABCC4O15439 1325 aa19.7■□□□□ 0.74
DDR1-249ENST00000503495 PPIP5K2O43314 1243 aa19.69■□□□□ 0.74
DDR1-249ENST00000503495 TCIRG1Q13488 830 aa19.69■□□□□ 0.74
DDR1-249ENST00000503495 NLRP10Q86W26 655 aa19.69■□□□□ 0.74
DDR1-249ENST00000503495 SP8Q8IXZ3 490 aa19.69■□□□□ 0.74
DDR1-249ENST00000503495 SUPT20HQ8NEM7 779 aa19.69■□□□□ 0.74
DDR1-249ENST00000503495 ANKRD36CQ5JPF3 1778 aa19.68■□□□□ 0.74
DDR1-249ENST00000503495 CHL1O00533 1208 aa19.68■□□□□ 0.74
DDR1-249ENST00000503495 CTCFP49711 727 aaPredicted RBP19.68■□□□□ 0.74
DDR1-249ENST00000503495 XAGE3Q8WTP9 111 aa19.68■□□□□ 0.74
DDR1-249ENST00000503495 AIMP1Q12904 312 aaKnown RBP19.67■□□□□ 0.74
DDR1-249ENST00000503495 AOC3Q16853 763 aa19.67■□□□□ 0.74
DDR1-249ENST00000503495 AIDAQ96BJ3 306 aa19.67■□□□□ 0.74
DDR1-249ENST00000503495 ZNRF3Q9ULT6 936 aa19.67■□□□□ 0.74
DDR1-249ENST00000503495 LAMB2P55268 1798 aa19.66■□□□□ 0.74
DDR1-249ENST00000503495 CXCL9Q07325 125 aa19.66■□□□□ 0.74
DDR1-249ENST00000503495 NECTIN2Q92692 538 aa19.66■□□□□ 0.74
DDR1-249ENST00000503495 GPRC5DQ9NZD1 345 aa19.66■□□□□ 0.74
DDR1-249ENST00000503495 TRMT112Q9UI30 125 aaKnown RBP19.66■□□□□ 0.74
DDR1-249ENST00000503495 WDR33Q9C0J8 1336 aaKnown RBP19.66■□□□□ 0.74
DDR1-249ENST00000503495 HCLS1P14317 486 aaPredicted RBP19.65■□□□□ 0.74
DDR1-249ENST00000503495 DPP8Q6V1X1 898 aaPredicted RBP19.65■□□□□ 0.74
DDR1-249ENST00000503495 MPNDQ8N594 471 aa19.65■□□□□ 0.74
DDR1-249ENST00000503495 ADARB2Q9NS39 739 aaKnown RBP19.65■□□□□ 0.74
DDR1-249ENST00000503495 ABT1Q9ULW3 272 aaKnown RBP19.65■□□□□ 0.74
DDR1-249ENST00000503495 TRIM35Q9UPQ4 493 aa19.65■□□□□ 0.74
DDR1-249ENST00000503495 SH3TC1Q8TE82 1336 aa19.65■□□□□ 0.74
DDR1-249ENST00000503495 MAP2K1Q02750 393 aaPredicted RBP19.64■□□□□ 0.73
DDR1-249ENST00000503495 KIAA2012Q0VF49 1180 aa19.64■□□□□ 0.73
DDR1-249ENST00000503495 GRAPQ13588 217 aa19.64■□□□□ 0.73
DDR1-249ENST00000503495 NEUROD2Q15784 382 aa19.64■□□□□ 0.73
DDR1-249ENST00000503495 DDX46Q7L014 1031 aaKnown RBP19.64■□□□□ 0.73
DDR1-249ENST00000503495 GRAPLQ8TC17 118 aaPredicted RBP19.64■□□□□ 0.73
DDR1-249ENST00000503495 RUNDC1Q96C34 613 aa19.64■□□□□ 0.73
DDR1-249ENST00000503495 MYBBP1AQ9BQG0 1328 aaKnown RBP19.64■□□□□ 0.73
DDR1-249ENST00000503495 SLC34A2O95436 690 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms