RNA–Protein interactions for RNA: ENST00000503258.5

PDE4D-210, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-210ENST00000503258 UNCXA6NJT0 531 aa10.36□□□□□ -0.75
PDE4D-210ENST00000503258 ZNF622Q969S3 477 aaKnown RBP eCLIP10.36□□□□□ -0.75
PDE4D-210ENST00000503258 BTBD11A6QL63 1104 aa10.36□□□□□ -0.75
PDE4D-210ENST00000503258 FKBP1BP68106 108 aa10.36□□□□□ -0.75
PDE4D-210ENST00000503258 NBPF5PQ86XG9 351 aaPredicted RBP10.36□□□□□ -0.75
PDE4D-210ENST00000503258 DPF2Q92785 391 aa10.36□□□□□ -0.75
PDE4D-210ENST00000503258 AKAP11Q9UKA4 1901 aa10.35□□□□□ -0.75
PDE4D-210ENST00000503258 BBOX1O75936 387 aa10.35□□□□□ -0.75
PDE4D-210ENST00000503258 LMOD1P29536 600 aaPredicted RBP10.35□□□□□ -0.75
PDE4D-210ENST00000503258 SP8Q8IXZ3 490 aa10.35□□□□□ -0.75
PDE4D-210ENST00000503258 NUDCQ9Y266 331 aa10.35□□□□□ -0.75
PDE4D-210ENST00000503258 ATP6V0A2Q9Y487 856 aa10.35□□□□□ -0.75
PDE4D-210ENST00000503258 SLC39A6Q13433 755 aa10.35□□□□□ -0.75
PDE4D-210ENST00000503258 PKN2Q16513 984 aaKnown RBP10.35□□□□□ -0.75
PDE4D-210ENST00000503258 HSP90AB3PQ58FF7 597 aa10.35□□□□□ -0.75
PDE4D-210ENST00000503258 CANXP27824 592 aaKnown RBP10.34□□□□□ -0.75
PDE4D-210ENST00000503258 SCNN1DP51172 638 aa10.34□□□□□ -0.75
PDE4D-210ENST00000503258 TAF7Q15545 349 aaPredicted RBP10.34□□□□□ -0.75
PDE4D-210ENST00000503258 SRCAPQ6ZRS2 3230 aa10.34□□□□□ -0.75
PDE4D-210ENST00000503258 PITPNM2Q9BZ72 1349 aa10.34□□□□□ -0.75
PDE4D-210ENST00000503258 COL4A1P02462 1669 aa10.34□□□□□ -0.75
PDE4D-210ENST00000503258 HOXB7P09629 217 aa10.34□□□□□ -0.75
PDE4D-210ENST00000503258 HTRA3P83110 453 aa10.34□□□□□ -0.75
PDE4D-210ENST00000503258 MLLT1Q03111 559 aaPredicted RBP10.34□□□□□ -0.75
PDE4D-210ENST00000503258 GPRC5DQ9NZD1 345 aa10.34□□□□□ -0.75
PDE4D-210ENST00000503258 TAF1P21675 1872 aa10.33□□□□□ -0.76
PDE4D-210ENST00000503258 CAPN2P17655 700 aa10.33□□□□□ -0.76
PDE4D-210ENST00000503258 TNIP1Q15025 636 aa10.33□□□□□ -0.76
PDE4D-210ENST00000503258 LRP10Q7Z4F1 713 aa10.33□□□□□ -0.76
PDE4D-210ENST00000503258 JDP2Q8WYK2 163 aa10.33□□□□□ -0.76
PDE4D-210ENST00000503258 NBPF26B4DH59 902 aa10.33□□□□□ -0.76
PDE4D-210ENST00000503258 NTSR2O95665 410 aa10.33□□□□□ -0.76
PDE4D-210ENST00000503258 NBPF10Q6P3W6 841 aaKnown RBP10.33□□□□□ -0.76
PDE4D-210ENST00000503258 NBPF15Q8N660 670 aa10.33□□□□□ -0.76
PDE4D-210ENST00000503258 ABCC12Q96J65 1359 aa10.33□□□□□ -0.76
PDE4D-210ENST00000503258 PPP1R42Q7Z4L9 355 aa10.32□□□□□ -0.76
PDE4D-210ENST00000503258 CAPNS2Q96L46 248 aa10.32□□□□□ -0.76
PDE4D-210ENST00000503258 ZNRF3Q9ULT6 936 aa10.32□□□□□ -0.76
PDE4D-210ENST00000503258 NOGQ13253 232 aa10.32□□□□□ -0.76
PDE4D-210ENST00000503258 NPM2Q86SE8 214 aaKnown RBP10.32□□□□□ -0.76
PDE4D-210ENST00000503258 ARAP2Q8WZ64 1704 aa10.32□□□□□ -0.76
PDE4D-210ENST00000503258 KIAA2012Q0VF49 1180 aa10.32□□□□□ -0.76
PDE4D-210ENST00000503258 GIGYF2Q6Y7W6 1299 aaKnown RBP10.32□□□□□ -0.76
PDE4D-210ENST00000503258 LBX1P52954 281 aa10.31□□□□□ -0.76
PDE4D-210ENST00000503258 CCDC102AQ96A19 550 aa10.31□□□□□ -0.76
PDE4D-210ENST00000503258 MKRN1Q9UHC7 482 aaKnown RBP10.31□□□□□ -0.76
PDE4D-210ENST00000503258 PPEF1O14829 653 aaPredicted RBP10.31□□□□□ -0.76
PDE4D-210ENST00000503258 SAPCD2Q86UD0 394 aa10.31□□□□□ -0.76
PDE4D-210ENST00000503258 A1BGP04217 495 aa10.3□□□□□ -0.76
PDE4D-210ENST00000503258 NIM1KQ8IY84 436 aa10.3□□□□□ -0.76
PDE4D-210ENST00000503258 TRIM28Q13263 835 aaKnown RBP10.3□□□□□ -0.76
PDE4D-210ENST00000503258 CST9Q5W186 159 aa10.3□□□□□ -0.76
PDE4D-210ENST00000503258 GCC1Q96CN9 775 aa10.3□□□□□ -0.76
PDE4D-210ENST00000503258 NIP7Q9Y221 180 aaKnown RBP eCLIP10.3□□□□□ -0.76
PDE4D-210ENST00000503258 HSP90B1P14625 803 aaKnown RBP10.29□□□□□ -0.76
PDE4D-210ENST00000503258 NCBP3Q53F19 620 aaKnown RBP10.29□□□□□ -0.76
PDE4D-210ENST00000503258 KIF6Q6ZMV9 814 aa10.29□□□□□ -0.76
PDE4D-210ENST00000503258 TBC1D2BQ9UPU7 963 aa10.29□□□□□ -0.76
PDE4D-210ENST00000503258 USP16Q9Y5T5 823 aa10.29□□□□□ -0.76
PDE4D-210ENST00000503258 RTL9Q8NET4 1388 aa10.29□□□□□ -0.76
PDE4D-210ENST00000503258 A0A1B0GUL6 1792 aa10.29□□□□□ -0.76
PDE4D-210ENST00000503258 POTEIP0CG38 1075 aa10.29□□□□□ -0.76
PDE4D-210ENST00000503258 POTEJP0CG39 1038 aa10.29□□□□□ -0.76
PDE4D-210ENST00000503258 EIF4A1P60842 406 aaKnown RBP10.29□□□□□ -0.76
PDE4D-210ENST00000503258 CDC37L1Q7L3B6 337 aa10.29□□□□□ -0.76
PDE4D-210ENST00000503258 PLEKHF1Q96S99 279 aa10.29□□□□□ -0.76
PDE4D-210ENST00000503258 PODXL2Q9NZ53 605 aa10.29□□□□□ -0.76
PDE4D-210ENST00000503258 FAM155AB1AL88 458 aaPredicted RBP10.28□□□□□ -0.76
PDE4D-210ENST00000503258 RTF1Q92541 710 aaKnown RBP10.28□□□□□ -0.76
PDE4D-210ENST00000503258 SF3B3Q15393 1217 aaKnown RBP10.28□□□□□ -0.76
PDE4D-210ENST00000503258 BEGAINQ9BUH8 593 aa10.28□□□□□ -0.76
PDE4D-210ENST00000503258 RPGRQ92834 1020 aaKnown RBP10.28□□□□□ -0.76
PDE4D-210ENST00000503258 ZNF277Q9NRM2 450 aaPredicted RBP10.28□□□□□ -0.76
PDE4D-210ENST00000503258 HMOX1P09601 288 aa10.27□□□□□ -0.77
PDE4D-210ENST00000503258 ZNF280AP59817 542 aaPredicted RBP10.27□□□□□ -0.77
PDE4D-210ENST00000503258 GPR101Q96P66 508 aaPredicted RBP10.27□□□□□ -0.77
PDE4D-210ENST00000503258 UBN2Q6ZU65 1347 aa10.27□□□□□ -0.77
PDE4D-210ENST00000503258 SLC10A3P09131 477 aa10.27□□□□□ -0.77
PDE4D-210ENST00000503258 GRAPQ13588 217 aa10.27□□□□□ -0.77
PDE4D-210ENST00000503258 GRAPLQ8TC17 118 aaPredicted RBP10.27□□□□□ -0.77
PDE4D-210ENST00000503258 CHMP4AQ9BY43 222 aa10.27□□□□□ -0.77
PDE4D-210ENST00000503258 MYH3P11055 1940 aa10.27□□□□□ -0.77
PDE4D-210ENST00000503258 PRKAR2BP31323 418 aa10.26□□□□□ -0.77
PDE4D-210ENST00000503258 TNNT2P45379 298 aaPredicted RBP10.26□□□□□ -0.77
PDE4D-210ENST00000503258 LMOD3Q0VAK6 560 aa10.26□□□□□ -0.77
PDE4D-210ENST00000503258 PRPF38BQ5VTL8 546 aaKnown RBP10.26□□□□□ -0.77
PDE4D-210ENST00000503258 TMX4Q9H1E5 349 aaPredicted RBP10.26□□□□□ -0.77
PDE4D-210ENST00000503258 CIAPIN1Q6FI81 312 aa10.26□□□□□ -0.77
PDE4D-210ENST00000503258 MCOLN1Q9GZU1 580 aa10.26□□□□□ -0.77
PDE4D-210ENST00000503258 NFE2L2Q16236 605 aa10.25□□□□□ -0.77
PDE4D-210ENST00000503258 UTP14AQ9BVJ6 771 aaKnown RBP10.25□□□□□ -0.77
PDE4D-210ENST00000503258 CACNA1FO60840 1977 aa10.25□□□□□ -0.77
PDE4D-210ENST00000503258 NLRP3Q96P20 1036 aa10.25□□□□□ -0.77
PDE4D-210ENST00000503258 ABCC4O15439 1325 aa10.25□□□□□ -0.77
PDE4D-210ENST00000503258 PPP2R1AP30153 589 aa10.24□□□□□ -0.77
PDE4D-210ENST00000503258 BICDL1Q6ZP65 573 aa10.24□□□□□ -0.77
PDE4D-210ENST00000503258 LARGE2Q8N3Y3 721 aa10.24□□□□□ -0.77
PDE4D-210ENST00000503258 AGBL3Q8NEM8 1001 aa10.24□□□□□ -0.77
PDE4D-210ENST00000503258 PHACTR3Q96KR7 559 aa10.24□□□□□ -0.77
PDE4D-210ENST00000503258 PDIA6Q15084 440 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms