RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 CLEC11AQ9Y240 323 aa18.23■□□□□ 0.51
DDR1-247ENST00000502955 AIDAQ96BJ3 306 aa18.22■□□□□ 0.51
DDR1-247ENST00000502955 COL4A5P29400 1685 aa18.22■□□□□ 0.51
DDR1-247ENST00000502955 EIF4A1P60842 406 aaKnown RBP18.21■□□□□ 0.51
DDR1-247ENST00000502955 MAP1SQ66K74 1059 aaPredicted RBP18.21■□□□□ 0.51
DDR1-247ENST00000502955 NUTM1Q86Y26 1132 aa18.21■□□□□ 0.51
DDR1-247ENST00000502955 UBN2Q6ZU65 1347 aa18.21■□□□□ 0.51
DDR1-247ENST00000502955 DEFB115Q30KQ5 88 aa18.2■□□□□ 0.5
DDR1-247ENST00000502955 KIF6Q6ZMV9 814 aa18.2■□□□□ 0.5
DDR1-247ENST00000502955 RPGRQ92834 1020 aaKnown RBP18.2■□□□□ 0.5
DDR1-247ENST00000502955 LTBP1Q14766 1721 aa18.2■□□□□ 0.5
DDR1-247ENST00000502955 NEFMP07197 916 aa18.19■□□□□ 0.5
DDR1-247ENST00000502955 EIF6P56537 245 aaKnown RBP18.19■□□□□ 0.5
DDR1-247ENST00000502955 TTLL7Q6ZT98 887 aa18.19■□□□□ 0.5
DDR1-247ENST00000502955 ZNF34Q8IZ26 560 aa18.19■□□□□ 0.5
DDR1-247ENST00000502955 CRAMP1Q96RY5 1269 aa18.19■□□□□ 0.5
DDR1-247ENST00000502955 PLEKHF1Q96S99 279 aa18.19■□□□□ 0.5
DDR1-247ENST00000502955 ERBB4Q15303 1308 aa18.19■□□□□ 0.5
DDR1-247ENST00000502955 SCNN1DP51172 638 aa18.18■□□□□ 0.5
DDR1-247ENST00000502955 NGEFQ8N5V2 710 aa18.18■□□□□ 0.5
DDR1-247ENST00000502955 DDX21Q9NR30 783 aaKnown RBP eCLIP18.18■□□□□ 0.5
DDR1-247ENST00000502955 THSD7BQ9C0I4 1608 aa18.18■□□□□ 0.5
DDR1-247ENST00000502955 NTSR2O95665 410 aa18.17■□□□□ 0.5
DDR1-247ENST00000502955 LMOD1P29536 600 aaPredicted RBP18.17■□□□□ 0.5
DDR1-247ENST00000502955 SUSD4Q5VX71 490 aa18.17■□□□□ 0.5
DDR1-247ENST00000502955 GIGYF2Q6Y7W6 1299 aaKnown RBP18.17■□□□□ 0.5
DDR1-247ENST00000502955 RBM17Q96I25 401 aaKnown RBP18.17■□□□□ 0.5
DDR1-247ENST00000502955 RRP7AQ9Y3A4 280 aaKnown RBP18.17■□□□□ 0.5
DDR1-247ENST00000502955 WDR33Q9C0J8 1336 aaKnown RBP18.17■□□□□ 0.5
DDR1-247ENST00000502955 PPEF1O14829 653 aaPredicted RBP18.16■□□□□ 0.5
DDR1-247ENST00000502955 MAP2K1Q02750 393 aaPredicted RBP18.16■□□□□ 0.5
DDR1-247ENST00000502955 NFE2L2Q16236 605 aa18.16■□□□□ 0.5
DDR1-247ENST00000502955 USP50Q70EL3 339 aaPredicted RBP18.16■□□□□ 0.5
DDR1-247ENST00000502955 LARGE2Q8N3Y3 721 aa18.16■□□□□ 0.5
DDR1-247ENST00000502955 VPS33BQ9H267 617 aa18.16■□□□□ 0.5
DDR1-247ENST00000502955 ZBTB3Q9H5J0 574 aa18.16■□□□□ 0.5
DDR1-247ENST00000502955 GJA3Q9Y6H8 435 aa18.16■□□□□ 0.5
DDR1-247ENST00000502955 MYL6BP14649 208 aa18.15■□□□□ 0.5
DDR1-247ENST00000502955 GPTP24298 496 aa18.15■□□□□ 0.5
DDR1-247ENST00000502955 LBX1P52954 281 aa18.15■□□□□ 0.5
DDR1-247ENST00000502955 PPP1R42Q7Z4L9 355 aa18.15■□□□□ 0.5
DDR1-247ENST00000502955 EPS15P42566 896 aa18.14■□□□□ 0.49
DDR1-247ENST00000502955 PARP10Q53GL7 1025 aa18.14■□□□□ 0.49
DDR1-247ENST00000502955 LRP10Q7Z4F1 713 aa18.14■□□□□ 0.49
DDR1-247ENST00000502955 ABT1Q9ULW3 272 aaKnown RBP18.14■□□□□ 0.49
DDR1-247ENST00000502955 TRPM7Q96QT4 1865 aa18.14■□□□□ 0.49
DDR1-247ENST00000502955 HSPA8P11142 646 aaKnown RBP18.13■□□□□ 0.49
DDR1-247ENST00000502955 SLC10A5Q5PT55 438 aa18.13■□□□□ 0.49
DDR1-247ENST00000502955 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
DDR1-247ENST00000502955 C3orf67Q6ZVT6 689 aa18.12■□□□□ 0.49
DDR1-247ENST00000502955 NIM1KQ8IY84 436 aa18.12■□□□□ 0.49
DDR1-247ENST00000502955 NLRP3Q96P20 1036 aa18.12■□□□□ 0.49
DDR1-247ENST00000502955 THUMPD2Q9BTF0 503 aaKnown RBP18.12■□□□□ 0.49
DDR1-247ENST00000502955 ATP6V0A2Q9Y487 856 aa18.12■□□□□ 0.49
DDR1-247ENST00000502955 PDIA6Q15084 440 aa18.11■□□□□ 0.49
DDR1-247ENST00000502955 SLC51AQ86UW1 340 aa18.11■□□□□ 0.49
DDR1-247ENST00000502955 RTFDC1Q9BY42 306 aaPredicted RBP18.11■□□□□ 0.49
DDR1-247ENST00000502955 ANKRD36CQ5JPF3 1778 aa18.1■□□□□ 0.49
DDR1-247ENST00000502955 PPIP5K2O43314 1243 aa18.1■□□□□ 0.49
DDR1-247ENST00000502955 ECE1P42892 770 aa18.1■□□□□ 0.49
DDR1-247ENST00000502955 CST9Q5W186 159 aa18.1■□□□□ 0.49
DDR1-247ENST00000502955 UTP14AQ9BVJ6 771 aaKnown RBP18.1■□□□□ 0.49
DDR1-247ENST00000502955 TMX4Q9H1E5 349 aaPredicted RBP18.1■□□□□ 0.49
DDR1-247ENST00000502955 ADARB2Q9NS39 739 aaKnown RBP18.1■□□□□ 0.49
DDR1-247ENST00000502955 BABAM1Q9NWV8 329 aa18.1■□□□□ 0.49
DDR1-247ENST00000502955 GPRC5DQ9NZD1 345 aa18.1■□□□□ 0.49
DDR1-247ENST00000502955 ABCC4O15439 1325 aa18.09■□□□□ 0.49
DDR1-247ENST00000502955 MAPK8IP3Q9UPT6 1336 aa18.09■□□□□ 0.49
DDR1-247ENST00000502955 AOC3Q16853 763 aa18.09■□□□□ 0.49
DDR1-247ENST00000502955 SUPT20HQ8NEM7 779 aa18.09■□□□□ 0.49
DDR1-247ENST00000502955 CAPNS2Q96L46 248 aa18.09■□□□□ 0.49
DDR1-247ENST00000502955 TLL2Q9Y6L7 1015 aa18.09■□□□□ 0.49
DDR1-247ENST00000502955 CDHR2Q9BYE9 1310 aa18.08■□□□□ 0.49
DDR1-247ENST00000502955 TCERG1O14776 1098 aaKnown RBP18.08■□□□□ 0.48
DDR1-247ENST00000502955 BBOX1O75936 387 aa18.08■□□□□ 0.48
DDR1-247ENST00000502955 FMR1Q06787 632 aaKnown RBP eCLIP18.08■□□□□ 0.48
DDR1-247ENST00000502955 TSPYL4Q9UJ04 414 aa18.08■□□□□ 0.48
DDR1-247ENST00000502955 ZNRF3Q9ULT6 936 aa18.08■□□□□ 0.48
DDR1-247ENST00000502955 LAMB2P55268 1798 aa18.08■□□□□ 0.48
DDR1-247ENST00000502955 CXCL9Q07325 125 aa18.07■□□□□ 0.48
DDR1-247ENST00000502955 SP8Q8IXZ3 490 aa18.07■□□□□ 0.48
DDR1-247ENST00000502955 ABHD8Q96I13 439 aa18.07■□□□□ 0.48
DDR1-247ENST00000502955 GPR101Q96P66 508 aaPredicted RBP18.07■□□□□ 0.48
DDR1-247ENST00000502955 PGAP2Q9UHJ9 254 aa18.07■□□□□ 0.48
DDR1-247ENST00000502955 TRAF5O00463 557 aa18.06■□□□□ 0.48
DDR1-247ENST00000502955 MAP2K2P36507 400 aa18.06■□□□□ 0.48
DDR1-247ENST00000502955 CYP4F22Q6NT55 531 aa18.06■□□□□ 0.48
DDR1-247ENST00000502955 HHIPL1Q96JK4 782 aa18.06■□□□□ 0.48
DDR1-247ENST00000502955 KIAA2012Q0VF49 1180 aa18.05■□□□□ 0.48
DDR1-247ENST00000502955 PROSER3Q2NL68 480 aa18.05■□□□□ 0.48
DDR1-247ENST00000502955 HSP90AB3PQ58FF7 597 aa18.05■□□□□ 0.48
DDR1-247ENST00000502955 SAPCD2Q86UD0 394 aa18.05■□□□□ 0.48
DDR1-247ENST00000502955 BEGAINQ9BUH8 593 aa18.05■□□□□ 0.48
DDR1-247ENST00000502955 EIF2S2P20042 333 aaKnown RBP18.04■□□□□ 0.48
DDR1-247ENST00000502955 DPP8Q6V1X1 898 aaPredicted RBP18.04■□□□□ 0.48
DDR1-247ENST00000502955 PAXIP1Q6ZW49 1069 aaPredicted RBP18.04■□□□□ 0.48
DDR1-247ENST00000502955 NLRP10Q86W26 655 aa18.04■□□□□ 0.48
DDR1-247ENST00000502955 ZC3H15Q8WU90 426 aaKnown RBP18.04■□□□□ 0.48
DDR1-247ENST00000502955 GMPSP49915 693 aaPredicted RBP18.03■□□□□ 0.48
DDR1-247ENST00000502955 RIPK4P57078 832 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms