RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 TREHO43280 583 aa10.73□□□□□ -0.69
NEDD4-203ENST00000502612 DBN1Q16643 649 aa10.73□□□□□ -0.69
NEDD4-203ENST00000502612 C8orf34Q49A92 452 aa10.73□□□□□ -0.69
NEDD4-203ENST00000502612 FBXO33Q7Z6M2 555 aa10.73□□□□□ -0.69
NEDD4-203ENST00000502612 NLRP8Q86W28 1048 aa10.73□□□□□ -0.69
NEDD4-203ENST00000502612 CMTR1Q8N1G2 835 aaKnown RBP10.73□□□□□ -0.69
NEDD4-203ENST00000502612 GIPC2Q8TF65 315 aa10.73□□□□□ -0.69
NEDD4-203ENST00000502612 CITED4Q96RK1 184 aa10.73□□□□□ -0.69
NEDD4-203ENST00000502612 BCL2L13Q9BXK5 485 aa10.73□□□□□ -0.69
NEDD4-203ENST00000502612 HCN2Q9UL51 889 aa10.73□□□□□ -0.69
NEDD4-203ENST00000502612 UNCXA6NJT0 531 aa10.72□□□□□ -0.69
NEDD4-203ENST00000502612 DSC3Q14574 896 aa10.72□□□□□ -0.69
NEDD4-203ENST00000502612 EFHC2Q5JST6 749 aa10.72□□□□□ -0.69
NEDD4-203ENST00000502612 PIK3R5Q8WYR1 880 aa10.72□□□□□ -0.69
NEDD4-203ENST00000502612 NIF3L1Q9GZT8 377 aa10.72□□□□□ -0.69
NEDD4-203ENST00000502612 NUCKS1Q9H1E3 243 aaKnown RBP10.72□□□□□ -0.69
NEDD4-203ENST00000502612 BRD7Q9NPI1 651 aa10.72□□□□□ -0.69
NEDD4-203ENST00000502612 AMOTL2Q9Y2J4 779 aa10.72□□□□□ -0.69
NEDD4-203ENST00000502612 KCNMB2Q9Y691 235 aa10.72□□□□□ -0.69
NEDD4-203ENST00000502612 DCDC2BA2VCK2 349 aa10.71□□□□□ -0.69
NEDD4-203ENST00000502612 FMR1Q06787 632 aaKnown RBP eCLIP10.71□□□□□ -0.69
NEDD4-203ENST00000502612 GRIN2CQ14957 1233 aa10.71□□□□□ -0.69
NEDD4-203ENST00000502612 RBM47A0AV96 593 aaKnown RBP10.7□□□□□ -0.7
NEDD4-203ENST00000502612 C11orf95C9JLR9 678 aaPredicted RBP10.7□□□□□ -0.7
NEDD4-203ENST00000502612 EHHADHQ08426 723 aa10.7□□□□□ -0.7
NEDD4-203ENST00000502612 SFSWAPQ12872 951 aaKnown RBP10.7□□□□□ -0.7
NEDD4-203ENST00000502612 SAMD5Q5TGI4 173 aa10.7□□□□□ -0.7
NEDD4-203ENST00000502612 ZNF837Q96EG3 531 aaPredicted RBP10.7□□□□□ -0.7
NEDD4-203ENST00000502612 DMRTB1Q96MA1 342 aa10.7□□□□□ -0.7
NEDD4-203ENST00000502612 SETDB2Q96T68 719 aa10.7□□□□□ -0.7
NEDD4-203ENST00000502612 STRN4Q9NRL3 753 aa10.7□□□□□ -0.7
NEDD4-203ENST00000502612 FAM13BQ9NYF5 915 aa10.7□□□□□ -0.7
NEDD4-203ENST00000502612 ATXN7O15265 892 aaPredicted RBP10.69□□□□□ -0.7
NEDD4-203ENST00000502612 ZNF16P17020 682 aaPredicted RBP10.69□□□□□ -0.7
NEDD4-203ENST00000502612 ITGA6P23229 1130 aa10.69□□□□□ -0.7
NEDD4-203ENST00000502612 USP5P45974 858 aa10.69□□□□□ -0.7
NEDD4-203ENST00000502612 PDE3BQ13370 1112 aa10.69□□□□□ -0.7
NEDD4-203ENST00000502612 TRIM22Q8IYM9 498 aa10.69□□□□□ -0.7
NEDD4-203ENST00000502612 KHNYNO15037 678 aaKnown RBP10.68□□□□□ -0.7
NEDD4-203ENST00000502612 PCSK2P16519 638 aa10.68□□□□□ -0.7
NEDD4-203ENST00000502612 MAPK8P45983 427 aa10.68□□□□□ -0.7
NEDD4-203ENST00000502612 ORC1Q13415 861 aa10.68□□□□□ -0.7
NEDD4-203ENST00000502612 UBAP1LF5GYI3 381 aa10.67□□□□□ -0.7
NEDD4-203ENST00000502612 EFSO43281 561 aa10.67□□□□□ -0.7
NEDD4-203ENST00000502612 BNIP3LO60238 219 aa10.67□□□□□ -0.7
NEDD4-203ENST00000502612 FAM157BP0CG42 384 aa10.67□□□□□ -0.7
NEDD4-203ENST00000502612 PLCB3Q01970 1234 aa10.67□□□□□ -0.7
NEDD4-203ENST00000502612 LBRQ14739 615 aaKnown RBP10.67□□□□□ -0.7
NEDD4-203ENST00000502612 ALKBH8Q96BT7 664 aaKnown RBP10.67□□□□□ -0.7
NEDD4-203ENST00000502612 ABHD17AQ96GS6 310 aa10.67□□□□□ -0.7
NEDD4-203ENST00000502612 FOXD3Q9UJU5 478 aaPredicted RBP10.67□□□□□ -0.7
NEDD4-203ENST00000502612 WWC3Q9ULE0 1092 aa10.67□□□□□ -0.7
NEDD4-203ENST00000502612 PCDHGC4Q9Y5F7 938 aa10.67□□□□□ -0.7
NEDD4-203ENST00000502612 PPFIA3O75145 1194 aa10.66□□□□□ -0.7
NEDD4-203ENST00000502612 TNP2Q05952 138 aa10.66□□□□□ -0.7
NEDD4-203ENST00000502612 EAPPQ56P03 285 aaPredicted RBP10.66□□□□□ -0.7
NEDD4-203ENST00000502612 GTPBP3Q969Y2 492 aaKnown RBP10.66□□□□□ -0.7
NEDD4-203ENST00000502612 RNF19AQ9NV58 838 aa10.66□□□□□ -0.7
NEDD4-203ENST00000502612 NDFIP2Q9NV92 336 aa10.66□□□□□ -0.7
NEDD4-203ENST00000502612 TMEM63CQ9P1W3 806 aa10.66□□□□□ -0.7
NEDD4-203ENST00000502612 H7C1W4 665 aa10.65□□□□□ -0.7
NEDD4-203ENST00000502612 GPR25O00155 361 aa10.65□□□□□ -0.7
NEDD4-203ENST00000502612 XYLBO75191 536 aa10.65□□□□□ -0.7
NEDD4-203ENST00000502612 MAPTP10636 758 aaKnown RBP10.65□□□□□ -0.7
NEDD4-203ENST00000502612 FIGNL1Q6PIW4 674 aa10.65□□□□□ -0.7
NEDD4-203ENST00000502612 EPB42P16452 691 aa10.64□□□□□ -0.71
NEDD4-203ENST00000502612 CD33P20138 364 aa10.64□□□□□ -0.71
NEDD4-203ENST00000502612 KRT25Q7Z3Z0 450 aa10.64□□□□□ -0.71
NEDD4-203ENST00000502612 ZNF438Q7Z4V0 828 aa10.64□□□□□ -0.71
NEDD4-203ENST00000502612 TTC16Q8NEE8 873 aa10.64□□□□□ -0.71
NEDD4-203ENST00000502612 KCNH4Q9UQ05 1017 aa10.64□□□□□ -0.71
NEDD4-203ENST00000502612 PNMA6FA0A0J9YX94 578 aa10.63□□□□□ -0.71
NEDD4-203ENST00000502612 CDC14CA4D256 554 aa10.63□□□□□ -0.71
NEDD4-203ENST00000502612 COL19A1Q14993 1142 aa10.63□□□□□ -0.71
NEDD4-203ENST00000502612 USPL1Q5W0Q7 1092 aa10.63□□□□□ -0.71
NEDD4-203ENST00000502612 TNFRSF21O75509 655 aa10.62□□□□□ -0.71
NEDD4-203ENST00000502612 LDHBP07195 334 aaKnown RBP10.62□□□□□ -0.71
NEDD4-203ENST00000502612 VEGFBP49765 207 aa10.62□□□□□ -0.71
NEDD4-203ENST00000502612 KCNQ4P56696 695 aa10.62□□□□□ -0.71
NEDD4-203ENST00000502612 VWA5B2Q8N398 1253 aa10.62□□□□□ -0.71
NEDD4-203ENST00000502612 ELP3Q9H9T3 547 aa10.62□□□□□ -0.71
NEDD4-203ENST00000502612 SASH3O75995 380 aa10.61□□□□□ -0.71
NEDD4-203ENST00000502612 RPLP1P05386 114 aaKnown RBP10.61□□□□□ -0.71
NEDD4-203ENST00000502612 ENOX2Q16206 610 aaKnown RBP10.61□□□□□ -0.71
NEDD4-203ENST00000502612 RAB44Q7Z6P3 723 aaPredicted RBP10.61□□□□□ -0.71
NEDD4-203ENST00000502612 CSRNP1Q96S65 589 aa10.61□□□□□ -0.71
NEDD4-203ENST00000502612 SLC30A3Q99726 388 aa10.61□□□□□ -0.71
NEDD4-203ENST00000502612 CFHR5Q9BXR6 569 aa10.61□□□□□ -0.71
NEDD4-203ENST00000502612 KIAA1522Q9P206 1035 aaPredicted RBP10.61□□□□□ -0.71
NEDD4-203ENST00000502612 FNDC3AQ9Y2H6 1198 aaKnown RBP10.61□□□□□ -0.71
NEDD4-203ENST00000502612 EIF1AYO14602 144 aaKnown RBP10.6□□□□□ -0.71
NEDD4-203ENST00000502612 EGFRP00533 1210 aa10.6□□□□□ -0.71
NEDD4-203ENST00000502612 TARSP26639 723 aaKnown RBP10.6□□□□□ -0.71
NEDD4-203ENST00000502612 PDE12Q6L8Q7 609 aaKnown RBP10.6□□□□□ -0.71
NEDD4-203ENST00000502612 XKR5Q6UX68 686 aa10.6□□□□□ -0.71
NEDD4-203ENST00000502612 GSX2Q9BZM3 304 aa10.6□□□□□ -0.71
NEDD4-203ENST00000502612 CNTN3Q9P232 1028 aa10.6□□□□□ -0.71
NEDD4-203ENST00000502612 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.6□□□□□ -0.71
NEDD4-203ENST00000502612 MRRFQ96E11 262 aaKnown RBP10.59□□□□□ -0.71
NEDD4-203ENST00000502612 FAM161BQ96MY7 647 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms