RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 DIAPH3Q9NSV4 1193 aa8.65□□□□□ -1.02
LYSMD3-203ENST00000500869 SPTLC3Q9NUV7 552 aa8.65□□□□□ -1.02
LYSMD3-203ENST00000500869 NCLP19338 710 aaKnown RBP8.65□□□□□ -1.02
LYSMD3-203ENST00000500869 C1orf141Q5JVX7 400 aa8.65□□□□□ -1.02
LYSMD3-203ENST00000500869 ANKRD24Q8TF21 1146 aa8.65□□□□□ -1.02
LYSMD3-203ENST00000500869 CYP46A1Q9Y6A2 500 aa8.65□□□□□ -1.02
LYSMD3-203ENST00000500869 ARAP2Q8WZ64 1704 aa8.65□□□□□ -1.03
LYSMD3-203ENST00000500869 LARGE1O95461 756 aa8.65□□□□□ -1.03
LYSMD3-203ENST00000500869 PRKCSHP14314 528 aaPredicted RBP8.65□□□□□ -1.03
LYSMD3-203ENST00000500869 PSMA5P28066 241 aa8.65□□□□□ -1.03
LYSMD3-203ENST00000500869 CREB3L3Q68CJ9 461 aa8.65□□□□□ -1.03
LYSMD3-203ENST00000500869 NECTIN2Q92692 538 aa8.65□□□□□ -1.03
LYSMD3-203ENST00000500869 PDRG1Q9NUG6 133 aa8.65□□□□□ -1.03
LYSMD3-203ENST00000500869 USP25Q9UHP3 1055 aa8.65□□□□□ -1.03
LYSMD3-203ENST00000500869 IGKV5-2P06315 115 aa8.64□□□□□ -1.03
LYSMD3-203ENST00000500869 PROSER3Q2NL68 480 aa8.64□□□□□ -1.03
LYSMD3-203ENST00000500869 RGS22Q8NE09 1264 aa8.64□□□□□ -1.03
LYSMD3-203ENST00000500869 CHAMP1Q96JM3 812 aa8.64□□□□□ -1.03
LYSMD3-203ENST00000500869 SMC3Q9UQE7 1217 aa8.64□□□□□ -1.03
LYSMD3-203ENST00000500869 TNS2Q63HR2 1409 aa8.64□□□□□ -1.03
LYSMD3-203ENST00000500869 GTF2F1P35269 517 aaKnown RBP eCLIP8.64□□□□□ -1.03
LYSMD3-203ENST00000500869 LARP1Q6PKG0 1096 aaKnown RBP8.64□□□□□ -1.03
LYSMD3-203ENST00000500869 MAP7D2Q96T17 732 aa8.64□□□□□ -1.03
LYSMD3-203ENST00000500869 NPHP3Q7Z494 1330 aa8.64□□□□□ -1.03
LYSMD3-203ENST00000500869 NEURL1BA8MQ27 555 aa8.64□□□□□ -1.03
LYSMD3-203ENST00000500869 SLC27A2O14975 620 aa8.64□□□□□ -1.03
LYSMD3-203ENST00000500869 ATP5JP18859 108 aa8.64□□□□□ -1.03
LYSMD3-203ENST00000500869 CASTP20810 708 aaKnown RBP8.64□□□□□ -1.03
LYSMD3-203ENST00000500869 METTL22Q9BUU2 404 aaPredicted RBP8.64□□□□□ -1.03
LYSMD3-203ENST00000500869 SLC52A2Q9HAB3 445 aa8.64□□□□□ -1.03
LYSMD3-203ENST00000500869 CNPY2Q9Y2B0 182 aa8.64□□□□□ -1.03
LYSMD3-203ENST00000500869 ADCK5Q3MIX3 580 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 NUTM2GQ5VZR2 741 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 RBM8AQ9Y5S9 174 aaKnown RBP8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 ANKRD36CQ5JPF3 1778 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 NWD2Q9ULI1 1742 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 TPM3P06753 285 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 RPS6KB1P23443 525 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 GJB2P29033 226 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 CASP7P55210 303 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 CWC27Q6UX04 472 aaKnown RBP8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 PIBF1Q8WXW3 757 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 LRRC59Q96AG4 307 aaKnown RBP8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 EAF2Q96CJ1 260 aaPredicted RBP8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 PDCL3Q9H2J4 239 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 BICC1Q9H694 974 aaKnown RBP8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 GPR108Q9NPR9 543 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 MYH7P12883 1935 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 TOGARAM1Q9Y4F4 1720 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 LRP5O75197 1615 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 CICQ96RK0 1608 aaPredicted RBP8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 SH3TC1Q8TE82 1336 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 DYNC1I1O14576 645 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 IFIT2P09913 472 aaKnown RBP8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 EIF2S2P20042 333 aaKnown RBP8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 PDCP20941 246 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 PSME1Q06323 249 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 ME3Q16798 604 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 SASS6Q6UVJ0 657 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 FBXL16Q8N461 479 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 TNS3Q68CZ2 1445 aa8.63□□□□□ -1.03
LYSMD3-203ENST00000500869 NMIQ13287 307 aaPredicted RBP8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 GCKRQ14397 625 aa8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 KRT32Q14532 448 aa8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 MPRIPQ6WCQ1 1025 aa8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 LTV1Q96GA3 475 aaPredicted RBP8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 C4AP0C0L4 1744 aa8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 C4BP0C0L5 1744 aa8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 ZKSCAN1P17029 563 aaPredicted RBP8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 MTERF4Q7Z6M4 381 aaKnown RBP8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 JAKMIP1Q96N16 626 aaKnown RBP8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 AGXT2Q9BYV1 514 aa8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 C9orf78Q9NZ63 289 aaPredicted RBP8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 KDM4AO75164 1064 aa8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 PHKG2P15735 406 aa8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 TOB2Q14106 344 aaPredicted RBP8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 RNF20Q5VTR2 975 aa8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 ZNF790Q6PG37 636 aa8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 AACSQ86V21 672 aa8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 SPG7Q9UQ90 795 aa8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 PLCH1Q4KWH8 1693 aa8.62□□□□□ -1.03
LYSMD3-203ENST00000500869 LRP6O75581 1613 aa8.61□□□□□ -1.03
LYSMD3-203ENST00000500869 ZNF609O15014 1411 aa8.61□□□□□ -1.03
LYSMD3-203ENST00000500869 KIAA2012Q0VF49 1180 aa8.61□□□□□ -1.03
LYSMD3-203ENST00000500869 PRPF40BQ6NWY9 871 aaKnown RBP8.61□□□□□ -1.03
LYSMD3-203ENST00000500869 TPCN1Q9ULQ1 816 aa8.61□□□□□ -1.03
LYSMD3-203ENST00000500869 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.61□□□□□ -1.03
LYSMD3-203ENST00000500869 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.61□□□□□ -1.03
LYSMD3-203ENST00000500869 MAP4K4O95819 1239 aaPredicted RBP8.61□□□□□ -1.03
LYSMD3-203ENST00000500869 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.61□□□□□ -1.03
LYSMD3-203ENST00000500869 PRIMPOLQ96LW4 560 aa8.61□□□□□ -1.03
LYSMD3-203ENST00000500869 TAF5LO75529 589 aa8.61□□□□□ -1.03
LYSMD3-203ENST00000500869 G3BP1Q13283 466 aaKnown RBP eCLIP8.61□□□□□ -1.03
LYSMD3-203ENST00000500869 ESCO1Q5FWF5 840 aa8.61□□□□□ -1.03
LYSMD3-203ENST00000500869 AXIN2Q9Y2T1 843 aa8.61□□□□□ -1.03
LYSMD3-203ENST00000500869 ABCC12Q96J65 1359 aa8.61□□□□□ -1.03
LYSMD3-203ENST00000500869 A0A0D9SFI3 127 aa8.6□□□□□ -1.03
LYSMD3-203ENST00000500869 CWF19L2Q2TBE0 894 aaKnown RBP8.6□□□□□ -1.03
LYSMD3-203ENST00000500869 SMARCC2Q8TAQ2 1214 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms