RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 HSP90AB1P08238 724 aaKnown RBP10.88□□□□□ -0.67
FN1-227ENST00000498719 DDIT3P35638 169 aa10.88□□□□□ -0.67
FN1-227ENST00000498719 MSH6P52701 1360 aa10.88□□□□□ -0.67
FN1-227ENST00000498719 HOXA2O43364 376 aa10.88□□□□□ -0.67
FN1-227ENST00000498719 RHBDL3P58872 404 aa10.88□□□□□ -0.67
FN1-227ENST00000498719 SNX21Q969T3 373 aa10.88□□□□□ -0.67
FN1-227ENST00000498719 ZSWIM4Q9H7M6 989 aa10.88□□□□□ -0.67
FN1-227ENST00000498719 NAP1L2Q9ULW6 460 aaPredicted RBP10.88□□□□□ -0.67
FN1-227ENST00000498719 USP6P35125 1406 aa10.88□□□□□ -0.67
FN1-227ENST00000498719 EVA1CP58658 441 aa10.87□□□□□ -0.67
FN1-227ENST00000498719 BMS1Q14692 1282 aaKnown RBP10.87□□□□□ -0.67
FN1-227ENST00000498719 TMEM259Q4ZIN3 620 aa10.87□□□□□ -0.67
FN1-227ENST00000498719 INTS3Q68E01 1043 aaKnown RBP10.87□□□□□ -0.67
FN1-227ENST00000498719 EFCAB3Q8N7B9 438 aa10.87□□□□□ -0.67
FN1-227ENST00000498719 MEIS3Q99687 375 aa10.87□□□□□ -0.67
FN1-227ENST00000498719 DCTPP1Q9H773 170 aa10.87□□□□□ -0.67
FN1-227ENST00000498719 PCDHB8Q9UN66 801 aa10.87□□□□□ -0.67
FN1-227ENST00000498719 ZBTB12Q9Y330 459 aaPredicted RBP10.87□□□□□ -0.67
FN1-227ENST00000498719 PCDHB13Q9Y5F0 798 aa10.87□□□□□ -0.67
FN1-227ENST00000498719 COL4A3BPQ9Y5P4 624 aa10.87□□□□□ -0.67
FN1-227ENST00000498719 ATP10DQ9P241 1426 aa10.87□□□□□ -0.67
FN1-227ENST00000498719 TOPAZ1Q8N9V7 1692 aa10.87□□□□□ -0.67
FN1-227ENST00000498719 RGPD8O14715 1765 aaPredicted RBP10.87□□□□□ -0.67
FN1-227ENST00000498719 TBX4P57082 545 aa10.87□□□□□ -0.67
FN1-227ENST00000498719 BIN2Q9UBW5 565 aaPredicted RBP10.87□□□□□ -0.67
FN1-227ENST00000498719 LIMD1Q9UGP4 676 aa10.87□□□□□ -0.67
FN1-227ENST00000498719 MAP3K19Q56UN5 1328 aa10.87□□□□□ -0.67
FN1-227ENST00000498719 TNPO1Q92973 898 aaKnown RBP10.86□□□□□ -0.67
FN1-227ENST00000498719 PANK2Q9BZ23 570 aa10.86□□□□□ -0.67
FN1-227ENST00000498719 PTPRUQ92729 1446 aa10.86□□□□□ -0.67
FN1-227ENST00000498719 RGPD1P0DJD0 1748 aa10.86□□□□□ -0.67
FN1-227ENST00000498719 F6X3S4 739 aa10.86□□□□□ -0.67
FN1-227ENST00000498719 CDC45O75419 566 aa10.86□□□□□ -0.67
FN1-227ENST00000498719 XRCC6P12956 609 aaKnown RBP eCLIP10.86□□□□□ -0.67
FN1-227ENST00000498719 IBSPP21815 317 aaPredicted RBP10.86□□□□□ -0.67
FN1-227ENST00000498719 CEP85Q6P2H3 762 aa10.86□□□□□ -0.67
FN1-227ENST00000498719 G2E3Q7L622 706 aa10.86□□□□□ -0.67
FN1-227ENST00000498719 NALCNQ8IZF0 1738 aa10.85□□□□□ -0.67
FN1-227ENST00000498719 GPR37L1O60883 481 aa10.85□□□□□ -0.67
FN1-227ENST00000498719 WDHD1O75717 1129 aaPredicted RBP10.85□□□□□ -0.67
FN1-227ENST00000498719 HSP90AA1P07900 732 aaKnown RBP10.85□□□□□ -0.67
FN1-227ENST00000498719 VAC14Q08AM6 782 aa10.85□□□□□ -0.67
FN1-227ENST00000498719 MTHFSDQ2M296 383 aaKnown RBP10.85□□□□□ -0.67
FN1-227ENST00000498719 ANKRD44Q8N8A2 993 aa10.85□□□□□ -0.67
FN1-227ENST00000498719 GPCPD1Q9NPB8 672 aa10.85□□□□□ -0.67
FN1-227ENST00000498719 RTL1A6NKG5 1358 aa10.85□□□□□ -0.67
FN1-227ENST00000498719 PTMAP06454 111 aaKnown RBP10.85□□□□□ -0.67
FN1-227ENST00000498719 GYS2P54840 703 aa10.85□□□□□ -0.67
FN1-227ENST00000498719 MYBPC2Q14324 1141 aa10.85□□□□□ -0.67
FN1-227ENST00000498719 SLC4A10Q6U841 1118 aa10.85□□□□□ -0.67
FN1-227ENST00000498719 CRB1P82279 1406 aa10.84□□□□□ -0.67
FN1-227ENST00000498719 GOLGA6L3A6NEY3 463 aa10.84□□□□□ -0.67
FN1-227ENST00000498719 BDNFP23560 247 aa10.84□□□□□ -0.67
FN1-227ENST00000498719 TTC22Q5TAA0 569 aa10.84□□□□□ -0.67
FN1-227ENST00000498719 GAS2L2Q8NHY3 880 aa10.84□□□□□ -0.67
FN1-227ENST00000498719 RPS6KC1Q96S38 1066 aa10.84□□□□□ -0.67
FN1-227ENST00000498719 PCDH12Q9NPG4 1184 aa10.84□□□□□ -0.67
FN1-227ENST00000498719 MAFBQ9Y5Q3 323 aaPredicted RBP10.84□□□□□ -0.67
FN1-227ENST00000498719 MRPL42Q9Y6G3 142 aaKnown RBP10.84□□□□□ -0.67
FN1-227ENST00000498719 CCDC189A1A4V9 331 aa10.84□□□□□ -0.67
FN1-227ENST00000498719 FSD2A1L4K1 749 aa10.84□□□□□ -0.67
FN1-227ENST00000498719 HMGB1P1B2RPK0 211 aaPredicted RBP10.84□□□□□ -0.67
FN1-227ENST00000498719 K7ELQ4 463 aaPredicted RBP10.84□□□□□ -0.67
FN1-227ENST00000498719 SSFA2P28290 1259 aa10.84□□□□□ -0.67
FN1-227ENST00000498719 L1TD1Q5T7N2 865 aaKnown RBP10.84□□□□□ -0.67
FN1-227ENST00000498719 HELBQ8NG08 1087 aaPredicted RBP10.84□□□□□ -0.67
FN1-227ENST00000498719 FMN2Q9NZ56 1722 aa10.83□□□□□ -0.67
FN1-227ENST00000498719 KIF24Q5T7B8 1368 aa10.83□□□□□ -0.68
FN1-227ENST00000498719 ABCB7O75027 752 aa10.83□□□□□ -0.68
FN1-227ENST00000498719 NLRP6P59044 892 aa10.83□□□□□ -0.68
FN1-227ENST00000498719 NUTM2GQ5VZR2 741 aa10.83□□□□□ -0.68
FN1-227ENST00000498719 FMNL3Q8IVF7 1028 aa10.83□□□□□ -0.68
FN1-227ENST00000498719 TSPYL4Q9UJ04 414 aa10.83□□□□□ -0.68
FN1-227ENST00000498719 USP31Q70CQ4 1352 aa10.83□□□□□ -0.68
FN1-227ENST00000498719 KIAA0232Q92628 1395 aa10.83□□□□□ -0.68
FN1-227ENST00000498719 PLEKHG1Q9ULL1 1385 aa10.83□□□□□ -0.68
FN1-227ENST00000498719 SDSP20132 328 aa10.83□□□□□ -0.68
FN1-227ENST00000498719 OSBPP22059 807 aa10.83□□□□□ -0.68
FN1-227ENST00000498719 CLCN1P35523 988 aa10.83□□□□□ -0.68
FN1-227ENST00000498719 BIRC2Q13490 618 aa10.83□□□□□ -0.68
FN1-227ENST00000498719 PPP2R2DQ66LE6 453 aa10.83□□□□□ -0.68
FN1-227ENST00000498719 NLRP7Q8WX94 980 aa10.83□□□□□ -0.68
FN1-227ENST00000498719 EYA1Q99502 592 aa10.83□□□□□ -0.68
FN1-227ENST00000498719 SSH2Q76I76 1423 aa10.82□□□□□ -0.68
FN1-227ENST00000498719 CEP170BQ9Y4F5 1589 aaPredicted RBP10.82□□□□□ -0.68
FN1-227ENST00000498719 ATP2B1P20020 1258 aa10.82□□□□□ -0.68
FN1-227ENST00000498719 PDE6BP35913 854 aa10.82□□□□□ -0.68
FN1-227ENST00000498719 RAB3GAP1Q15042 981 aa10.82□□□□□ -0.68
FN1-227ENST00000498719 RINLQ6ZS11 566 aa10.82□□□□□ -0.68
FN1-227ENST00000498719 NT5DC4Q86YG4 428 aa10.82□□□□□ -0.68
FN1-227ENST00000498719 RPAP2Q8IXW5 612 aaPredicted RBP10.82□□□□□ -0.68
FN1-227ENST00000498719 NGDNQ8NEJ9 315 aaKnown RBP10.82□□□□□ -0.68
FN1-227ENST00000498719 ALG2Q9H553 416 aa10.82□□□□□ -0.68
FN1-227ENST00000498719 PTPRCP08575 1304 aa10.82□□□□□ -0.68
FN1-227ENST00000498719 DDX11L8A8MPP1 907 aa10.82□□□□□ -0.68
FN1-227ENST00000498719 RTF1Q92541 710 aaKnown RBP10.82□□□□□ -0.68
FN1-227ENST00000498719 AMPHP49418 695 aa10.81□□□□□ -0.68
FN1-227ENST00000498719 PPP4CP60510 307 aa10.81□□□□□ -0.68
FN1-227ENST00000498719 TSHZ3Q63HK5 1081 aa10.81□□□□□ -0.68
FN1-227ENST00000498719 METTL16Q86W50 562 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms