RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 PPP1R42Q7Z4L9 355 aa15.38■□□□□ 0.05
NUDCD3-211ENST00000497978 ZNF34Q8IZ26 560 aa15.38■□□□□ 0.05
NUDCD3-211ENST00000497978 ABCC12Q96J65 1359 aa15.37■□□□□ 0.05
NUDCD3-211ENST00000497978 CACNB1Q02641 598 aaPredicted RBP15.37■□□□□ 0.05
NUDCD3-211ENST00000497978 PARP10Q53GL7 1025 aa15.37■□□□□ 0.05
NUDCD3-211ENST00000497978 SUSD4Q5VX71 490 aa15.37■□□□□ 0.05
NUDCD3-211ENST00000497978 LAS1LQ9Y4W2 734 aaKnown RBP15.37■□□□□ 0.05
NUDCD3-211ENST00000497978 UBN2Q6ZU65 1347 aa15.37■□□□□ 0.05
NUDCD3-211ENST00000497978 POTECB2RU33 542 aa15.36■□□□□ 0.05
NUDCD3-211ENST00000497978 DDNO94850 711 aaPredicted RBP15.36■□□□□ 0.05
NUDCD3-211ENST00000497978 PDIA6Q15084 440 aa15.36■□□□□ 0.05
NUDCD3-211ENST00000497978 CC2D2BQ6DHV5 1058 aa15.36■□□□□ 0.05
NUDCD3-211ENST00000497978 KLRG1Q96E93 195 aa15.36■□□□□ 0.05
NUDCD3-211ENST00000497978 ZNF277Q9NRM2 450 aaPredicted RBP15.36■□□□□ 0.05
NUDCD3-211ENST00000497978 RIC1Q4ADV7 1423 aa15.35■□□□□ 0.05
NUDCD3-211ENST00000497978 IQCA1LA6NCM1 817 aa15.35■□□□□ 0.05
NUDCD3-211ENST00000497978 CHL1O00533 1208 aa15.35■□□□□ 0.05
NUDCD3-211ENST00000497978 NTSR2O95665 410 aa15.35■□□□□ 0.05
NUDCD3-211ENST00000497978 HOXA10P31260 410 aaPredicted RBP15.35■□□□□ 0.05
NUDCD3-211ENST00000497978 HTRA3P83110 453 aa15.35■□□□□ 0.05
NUDCD3-211ENST00000497978 GRIPAP1Q4V328 841 aa15.35■□□□□ 0.05
NUDCD3-211ENST00000497978 OLFM4Q6UX06 510 aa15.35■□□□□ 0.05
NUDCD3-211ENST00000497978 NECTIN2Q92692 538 aa15.35■□□□□ 0.05
NUDCD3-211ENST00000497978 RBM17Q96I25 401 aaKnown RBP15.35■□□□□ 0.05
NUDCD3-211ENST00000497978 ADAMTS8Q9UP79 889 aa15.35■□□□□ 0.05
NUDCD3-211ENST00000497978 ANXA1P04083 346 aa15.34■□□□□ 0.05
NUDCD3-211ENST00000497978 IARSP41252 1262 aaKnown RBP15.34■□□□□ 0.05
NUDCD3-211ENST00000497978 PROSER3Q2NL68 480 aa15.34■□□□□ 0.05
NUDCD3-211ENST00000497978 HSP90AB3PQ58FF7 597 aa15.34■□□□□ 0.05
NUDCD3-211ENST00000497978 LRP10Q7Z4F1 713 aa15.34■□□□□ 0.05
NUDCD3-211ENST00000497978 SYNE4Q8N205 404 aa15.34■□□□□ 0.05
NUDCD3-211ENST00000497978 NLRP3Q96P20 1036 aa15.34■□□□□ 0.05
NUDCD3-211ENST00000497978 CRAMP1Q96RY5 1269 aa15.34■□□□□ 0.05
NUDCD3-211ENST00000497978 PSMD1Q99460 953 aa15.34■□□□□ 0.05
NUDCD3-211ENST00000497978 UTP14AQ9BVJ6 771 aaKnown RBP15.34■□□□□ 0.05
NUDCD3-211ENST00000497978 TMX4Q9H1E5 349 aaPredicted RBP15.34■□□□□ 0.05
NUDCD3-211ENST00000497978 PRKRIP1Q9H875 184 aaPredicted RBP15.34■□□□□ 0.05
NUDCD3-211ENST00000497978 TRIM35Q9UPQ4 493 aa15.34■□□□□ 0.05
NUDCD3-211ENST00000497978 AIMP1Q12904 312 aaKnown RBP15.33■□□□□ 0.04
NUDCD3-211ENST00000497978 COPS6Q7L5N1 327 aa15.33■□□□□ 0.04
NUDCD3-211ENST00000497978 JDP2Q8WYK2 163 aa15.33■□□□□ 0.04
NUDCD3-211ENST00000497978 L3MBTL3Q96JM7 780 aaPredicted RBP15.33■□□□□ 0.04
NUDCD3-211ENST00000497978 DDX21Q9NR30 783 aaKnown RBP eCLIP15.33■□□□□ 0.04
NUDCD3-211ENST00000497978 CHADLQ6NUI6 762 aa15.32■□□□□ 0.04
NUDCD3-211ENST00000497978 XAGE3Q8WTP9 111 aa15.32■□□□□ 0.04
NUDCD3-211ENST00000497978 RNF123Q5XPI4 1314 aa15.32■□□□□ 0.04
NUDCD3-211ENST00000497978 PPEF1O14829 653 aaPredicted RBP15.31■□□□□ 0.04
NUDCD3-211ENST00000497978 HOXB7P09629 217 aa15.31■□□□□ 0.04
NUDCD3-211ENST00000497978 DSG3P32926 999 aa15.31■□□□□ 0.04
NUDCD3-211ENST00000497978 SLC10A5Q5PT55 438 aa15.31■□□□□ 0.04
NUDCD3-211ENST00000497978 IFFO2Q5TF58 517 aa15.31■□□□□ 0.04
NUDCD3-211ENST00000497978 FZD9O00144 591 aa15.3■□□□□ 0.04
NUDCD3-211ENST00000497978 SCN4AP35499 1836 aa15.3■□□□□ 0.04
NUDCD3-211ENST00000497978 MKRN4PQ13434 485 aaPredicted RBP15.3■□□□□ 0.04
NUDCD3-211ENST00000497978 TCIRG1Q13488 830 aa15.3■□□□□ 0.04
NUDCD3-211ENST00000497978 KRT24Q2M2I5 525 aa15.3■□□□□ 0.04
NUDCD3-211ENST00000497978 HDGFL1Q5TGJ6 251 aa15.3■□□□□ 0.04
NUDCD3-211ENST00000497978 JMYQ8N9B5 988 aa15.3■□□□□ 0.04
NUDCD3-211ENST00000497978 CFAP44Q96MT7 982 aa15.3■□□□□ 0.04
NUDCD3-211ENST00000497978 ZNF541Q9H0D2 1346 aa15.3■□□□□ 0.04
NUDCD3-211ENST00000497978 TCERG1O14776 1098 aaKnown RBP15.29■□□□□ 0.04
NUDCD3-211ENST00000497978 EIF6P56537 245 aaKnown RBP15.29■□□□□ 0.04
NUDCD3-211ENST00000497978 CALD1Q05682 793 aaKnown RBP15.29■□□□□ 0.04
NUDCD3-211ENST00000497978 NLRP10Q86W26 655 aa15.29■□□□□ 0.04
NUDCD3-211ENST00000497978 LDHDQ86WU2 507 aa15.29■□□□□ 0.04
NUDCD3-211ENST00000497978 TAF1DQ9H5J8 278 aaPredicted RBP15.29■□□□□ 0.04
NUDCD3-211ENST00000497978 CHPF2Q9P2E5 772 aa15.29■□□□□ 0.04
NUDCD3-211ENST00000497978 DBF4Q9UBU7 674 aaPredicted RBP15.29■□□□□ 0.04
NUDCD3-211ENST00000497978 TRMT112Q9UI30 125 aaKnown RBP15.29■□□□□ 0.04
NUDCD3-211ENST00000497978 HACL1Q9UJ83 578 aa15.29■□□□□ 0.04
NUDCD3-211ENST00000497978 ANKRD36CQ5JPF3 1778 aa15.29■□□□□ 0.04
NUDCD3-211ENST00000497978 SNED1Q8TER0 1413 aa15.28■□□□□ 0.04
NUDCD3-211ENST00000497978 EAPPQ56P03 285 aaPredicted RBP15.28■□□□□ 0.04
NUDCD3-211ENST00000497978 C3orf67Q6ZVT6 689 aa15.28■□□□□ 0.04
NUDCD3-211ENST00000497978 GPC2Q8N158 579 aa15.28■□□□□ 0.04
NUDCD3-211ENST00000497978 LARGE2Q8N3Y3 721 aa15.28■□□□□ 0.04
NUDCD3-211ENST00000497978 SH3TC1Q8TE82 1336 aa15.27■□□□□ 0.04
NUDCD3-211ENST00000497978 POTEIP0CG38 1075 aa15.27■□□□□ 0.04
NUDCD3-211ENST00000497978 POTEJP0CG39 1038 aa15.27■□□□□ 0.04
NUDCD3-211ENST00000497978 DUSP27Q5VZP5 1158 aa15.27■□□□□ 0.04
NUDCD3-211ENST00000497978 ANKRD13DQ6ZTN6 518 aa15.27■□□□□ 0.04
NUDCD3-211ENST00000497978 PLBD2Q8NHP8 589 aa15.27■□□□□ 0.04
NUDCD3-211ENST00000497978 HYPKQ9NX55 129 aa15.27■□□□□ 0.04
NUDCD3-211ENST00000497978 CLEC11AQ9Y240 323 aa15.27■□□□□ 0.04
NUDCD3-211ENST00000497978 ATP6V0A2Q9Y487 856 aa15.27■□□□□ 0.04
NUDCD3-211ENST00000497978 APAF1O14727 1248 aa15.26■□□□□ 0.03
NUDCD3-211ENST00000497978 BBOX1O75936 387 aa15.26■□□□□ 0.03
NUDCD3-211ENST00000497978 HCLS1P14317 486 aaPredicted RBP15.26■□□□□ 0.03
NUDCD3-211ENST00000497978 EPHX2P34913 555 aa15.26■□□□□ 0.03
NUDCD3-211ENST00000497978 DDX46Q7L014 1031 aaKnown RBP15.26■□□□□ 0.03
NUDCD3-211ENST00000497978 PNMA8AQ86V59 439 aaPredicted RBP15.26■□□□□ 0.03
NUDCD3-211ENST00000497978 SUPT20HQ8NEM7 779 aa15.26■□□□□ 0.03
NUDCD3-211ENST00000497978 VPS33BQ9H267 617 aa15.26■□□□□ 0.03
NUDCD3-211ENST00000497978 CREBZFQ9NS37 354 aa15.26■□□□□ 0.03
NUDCD3-211ENST00000497978 MBIPQ9NS73 344 aa15.26■□□□□ 0.03
NUDCD3-211ENST00000497978 ZBTB12Q9Y330 459 aaPredicted RBP15.26■□□□□ 0.03
NUDCD3-211ENST00000497978 ABCC4O15439 1325 aa15.25■□□□□ 0.03
NUDCD3-211ENST00000497978 LMOD1P29536 600 aaPredicted RBP15.25■□□□□ 0.03
NUDCD3-211ENST00000497978 GNAI1P63096 354 aa15.25■□□□□ 0.03
NUDCD3-211ENST00000497978 NIM1KQ8IY84 436 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms