RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 FANCIQ9NVI1 1328 aa14.57□□□□□ -0.08
ERCC8-208ENST00000497892 GOLGB1Q14789 3259 aaKnown RBP14.57□□□□□ -0.08
ERCC8-208ENST00000497892 CARMIL3Q8ND23 1372 aa14.57□□□□□ -0.08
ERCC8-208ENST00000497892 ANKRD36CQ5JPF3 1778 aa14.56□□□□□ -0.08
ERCC8-208ENST00000497892 PROSER3Q2NL68 480 aa14.56□□□□□ -0.08
ERCC8-208ENST00000497892 TBC1D9BQ66K14 1250 aa14.56□□□□□ -0.08
ERCC8-208ENST00000497892 CLEC4GQ6UXB4 293 aa14.56□□□□□ -0.08
ERCC8-208ENST00000497892 C8orf58Q8NAV2 365 aa14.56□□□□□ -0.08
ERCC8-208ENST00000497892 DDX21Q9NR30 783 aaKnown RBP eCLIP14.56□□□□□ -0.08
ERCC8-208ENST00000497892 BRCA1P38398 1863 aaKnown RBP14.56□□□□□ -0.08
ERCC8-208ENST00000497892 PXDNLA1KZ92 1463 aa14.56□□□□□ -0.08
ERCC8-208ENST00000497892 N4BP2Q86UW6 1770 aaPredicted RBP14.55□□□□□ -0.08
ERCC8-208ENST00000497892 KIF6Q6ZMV9 814 aa14.55□□□□□ -0.08
ERCC8-208ENST00000497892 TTLL7Q6ZT98 887 aa14.55□□□□□ -0.08
ERCC8-208ENST00000497892 NECTIN2Q92692 538 aa14.55□□□□□ -0.08
ERCC8-208ENST00000497892 CHPF2Q9P2E5 772 aa14.55□□□□□ -0.08
ERCC8-208ENST00000497892 MAP3K15Q6ZN16 1313 aa14.55□□□□□ -0.08
ERCC8-208ENST00000497892 ATP10DQ9P241 1426 aa14.55□□□□□ -0.08
ERCC8-208ENST00000497892 DLEC1Q9Y238 1755 aa14.55□□□□□ -0.08
ERCC8-208ENST00000497892 ANKRD31Q8N7Z5 1873 aa14.55□□□□□ -0.08
ERCC8-208ENST00000497892 UTRNP46939 3433 aa14.54□□□□□ -0.08
ERCC8-208ENST00000497892 POTEMA6NI47 508 aa14.54□□□□□ -0.08
ERCC8-208ENST00000497892 ERVV-1B6SEH8 477 aa14.54□□□□□ -0.08
ERCC8-208ENST00000497892 ANXA1P04083 346 aa14.54□□□□□ -0.08
ERCC8-208ENST00000497892 BICDL1Q6ZP65 573 aa14.54□□□□□ -0.08
ERCC8-208ENST00000497892 DBF4Q9UBU7 674 aaPredicted RBP14.54□□□□□ -0.08
ERCC8-208ENST00000497892 ARFGEF2Q9Y6D5 1785 aa14.53□□□□□ -0.08
ERCC8-208ENST00000497892 ELL2O00472 640 aaPredicted RBP14.53□□□□□ -0.08
ERCC8-208ENST00000497892 SERPINB2P05120 415 aa14.53□□□□□ -0.08
ERCC8-208ENST00000497892 HLFQ16534 295 aa14.53□□□□□ -0.08
ERCC8-208ENST00000497892 TSPYL6Q8N831 410 aa14.53□□□□□ -0.08
ERCC8-208ENST00000497892 PDAP1Q13442 181 aaKnown RBP14.52□□□□□ -0.09
ERCC8-208ENST00000497892 POTEGQ6S5H5 508 aa14.52□□□□□ -0.09
ERCC8-208ENST00000497892 SETDB2Q96T68 719 aa14.52□□□□□ -0.09
ERCC8-208ENST00000497892 ZBTB3Q9H5J0 574 aa14.52□□□□□ -0.09
ERCC8-208ENST00000497892 MYH16Q9H6N6 1097 aa14.52□□□□□ -0.09
ERCC8-208ENST00000497892 COL11A2P13942 1736 aaPredicted RBP14.52□□□□□ -0.09
ERCC8-208ENST00000497892 TGFB2P61812 414 aa14.51□□□□□ -0.09
ERCC8-208ENST00000497892 GOLGA2Q08379 1002 aa14.51□□□□□ -0.09
ERCC8-208ENST00000497892 TWISTNBQ3B726 338 aaPredicted RBP14.51□□□□□ -0.09
ERCC8-208ENST00000497892 LCE2DQ5TA82 110 aaPredicted RBP14.51□□□□□ -0.09
ERCC8-208ENST00000497892 XAGE3Q8WTP9 111 aa14.51□□□□□ -0.09
ERCC8-208ENST00000497892 CHMP4AQ9BY43 222 aa14.51□□□□□ -0.09
ERCC8-208ENST00000497892 HYPKQ9NX55 129 aa14.51□□□□□ -0.09
ERCC8-208ENST00000497892 NIP7Q9Y221 180 aaKnown RBP eCLIP14.51□□□□□ -0.09
ERCC8-208ENST00000497892 CACNA1FO60840 1977 aa14.51□□□□□ -0.09
ERCC8-208ENST00000497892 PRR5LQ6MZQ0 368 aa14.5□□□□□ -0.09
ERCC8-208ENST00000497892 GIGYF2Q6Y7W6 1299 aaKnown RBP14.5□□□□□ -0.09
ERCC8-208ENST00000497892 COPS6Q7L5N1 327 aa14.5□□□□□ -0.09
ERCC8-208ENST00000497892 CNBD1Q8NA66 436 aa14.5□□□□□ -0.09
ERCC8-208ENST00000497892 IBTKQ9P2D0 1353 aaPredicted RBP14.49□□□□□ -0.09
ERCC8-208ENST00000497892 AIMP1Q12904 312 aaKnown RBP14.49□□□□□ -0.09
ERCC8-208ENST00000497892 CCDC30Q5VVM6 783 aa14.49□□□□□ -0.09
ERCC8-208ENST00000497892 ARFGEF1Q9Y6D6 1849 aa14.48□□□□□ -0.09
ERCC8-208ENST00000497892 UBN2Q6ZU65 1347 aa14.48□□□□□ -0.09
ERCC8-208ENST00000497892 EXOSC9Q06265 439 aaKnown RBP14.48□□□□□ -0.09
ERCC8-208ENST00000497892 MKRN3Q13064 507 aaKnown RBP14.48□□□□□ -0.09
ERCC8-208ENST00000497892 NBPF5PQ86XG9 351 aaPredicted RBP14.48□□□□□ -0.09
ERCC8-208ENST00000497892 PDCD7Q8N8D1 485 aaKnown RBP14.48□□□□□ -0.09
ERCC8-208ENST00000497892 TNRC6CQ9HCJ0 1690 aaKnown RBP14.48□□□□□ -0.09
ERCC8-208ENST00000497892 A0A0G2JLW4 131 aa14.47□□□□□ -0.09
ERCC8-208ENST00000497892 E9PSI1 815 aa14.47□□□□□ -0.09
ERCC8-208ENST00000497892 DPEP1P16444 411 aa14.47□□□□□ -0.09
ERCC8-208ENST00000497892 YBX3P16989 372 aaKnown RBP eCLIP14.47□□□□□ -0.09
ERCC8-208ENST00000497892 GPR162Q16538 588 aa14.47□□□□□ -0.09
ERCC8-208ENST00000497892 ZNF34Q8IZ26 560 aa14.47□□□□□ -0.09
ERCC8-208ENST00000497892 PLBD2Q8NHP8 589 aa14.47□□□□□ -0.09
ERCC8-208ENST00000497892 FAM163AQ96GL9 167 aaPredicted RBP14.47□□□□□ -0.09
ERCC8-208ENST00000497892 VAMP4O75379 141 aa14.46□□□□□ -0.09
ERCC8-208ENST00000497892 KCNA3P22001 575 aa14.46□□□□□ -0.09
ERCC8-208ENST00000497892 GPTP24298 496 aa14.46□□□□□ -0.09
ERCC8-208ENST00000497892 ST5P78524 1137 aa14.46□□□□□ -0.09
ERCC8-208ENST00000497892 HSP90AB3PQ58FF7 597 aa14.46□□□□□ -0.09
ERCC8-208ENST00000497892 SLAIN1Q8ND83 568 aa14.46□□□□□ -0.09
ERCC8-208ENST00000497892 BRIP1Q9BX63 1249 aa14.46□□□□□ -0.09
ERCC8-208ENST00000497892 STK31Q9BXU1 1019 aa14.46□□□□□ -0.09
ERCC8-208ENST00000497892 PHAXQ9H814 394 aaKnown RBP14.46□□□□□ -0.09
ERCC8-208ENST00000497892 RIC1Q4ADV7 1423 aa14.46□□□□□ -0.09
ERCC8-208ENST00000497892 CHD4Q14839 1912 aa14.46□□□□□ -0.09
ERCC8-208ENST00000497892 NPHP1O15259 732 aa14.45□□□□□ -0.1
ERCC8-208ENST00000497892 CHRNA5P30532 468 aa14.45□□□□□ -0.1
ERCC8-208ENST00000497892 SLFN5Q08AF3 891 aa14.45□□□□□ -0.1
ERCC8-208ENST00000497892 PARP10Q53GL7 1025 aa14.45□□□□□ -0.1
ERCC8-208ENST00000497892 TPTE2Q6XPS3 522 aa14.45□□□□□ -0.1
ERCC8-208ENST00000497892 ANKRD13DQ6ZTN6 518 aa14.45□□□□□ -0.1
ERCC8-208ENST00000497892 CCDC24Q8N4L8 307 aa14.45□□□□□ -0.1
ERCC8-208ENST00000497892 ABCC12Q96J65 1359 aa14.45□□□□□ -0.1
ERCC8-208ENST00000497892 PDE6BP35913 854 aa14.44□□□□□ -0.1
ERCC8-208ENST00000497892 TCIRG1Q13488 830 aa14.44□□□□□ -0.1
ERCC8-208ENST00000497892 NYXQ9GZU5 481 aa14.44□□□□□ -0.1
ERCC8-208ENST00000497892 WWC3Q9ULE0 1092 aa14.44□□□□□ -0.1
ERCC8-208ENST00000497892 PDZRN3Q9UPQ7 1066 aa14.44□□□□□ -0.1
ERCC8-208ENST00000497892 RNF123Q5XPI4 1314 aa14.43□□□□□ -0.1
ERCC8-208ENST00000497892 LAMB2P55268 1798 aa14.43□□□□□ -0.1
ERCC8-208ENST00000497892 FAM177BA6PVY3 158 aa14.43□□□□□ -0.1
ERCC8-208ENST00000497892 TCERG1O14776 1098 aaKnown RBP14.43□□□□□ -0.1
ERCC8-208ENST00000497892 NTSR2O95665 410 aa14.43□□□□□ -0.1
ERCC8-208ENST00000497892 SUSD4Q5VX71 490 aa14.43□□□□□ -0.1
ERCC8-208ENST00000497892 NLRP10Q86W26 655 aa14.43□□□□□ -0.1
ERCC8-208ENST00000497892 C2CD5Q86YS7 1000 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms