RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 KIF6Q6ZMV9 814 aa28.82■■■□□ 2.2
CLIC4-204ENST00000497755 JDP2Q8WYK2 163 aa28.82■■■□□ 2.2
CLIC4-204ENST00000497755 THUMPD2Q9BTF0 503 aaKnown RBP28.82■■■□□ 2.2
CLIC4-204ENST00000497755 KDM3BQ7LBC6 1761 aa28.82■■■□□ 2.2
CLIC4-204ENST00000497755 UBN2Q6ZU65 1347 aa28.81■■■□□ 2.2
CLIC4-204ENST00000497755 NEFMP07197 916 aa28.81■■■□□ 2.2
CLIC4-204ENST00000497755 GPTP24298 496 aa28.81■■■□□ 2.2
CLIC4-204ENST00000497755 SUSD4Q5VX71 490 aa28.81■■■□□ 2.2
CLIC4-204ENST00000497755 ZBTB3Q9H5J0 574 aa28.8■■■□□ 2.2
CLIC4-204ENST00000497755 NFE2L2Q16236 605 aa28.79■■■□□ 2.2
CLIC4-204ENST00000497755 ZNF34Q8IZ26 560 aa28.79■■■□□ 2.2
CLIC4-204ENST00000497755 RPGRQ92834 1020 aaKnown RBP28.79■■■□□ 2.2
CLIC4-204ENST00000497755 COL4A5P29400 1685 aa28.78■■■□□ 2.2
CLIC4-204ENST00000497755 PRDM10Q9NQV6 1147 aa28.78■■■□□ 2.2
CLIC4-204ENST00000497755 IBTKQ9P2D0 1353 aaPredicted RBP28.77■■■□□ 2.2
CLIC4-204ENST00000497755 EIF6P56537 245 aaKnown RBP28.77■■■□□ 2.2
CLIC4-204ENST00000497755 GRIPAP1Q4V328 841 aa28.77■■■□□ 2.2
CLIC4-204ENST00000497755 SLC51AQ86UW1 340 aa28.77■■■□□ 2.2
CLIC4-204ENST00000497755 CRAMP1Q96RY5 1269 aa28.77■■■□□ 2.2
CLIC4-204ENST00000497755 WBP1LQ9NX94 342 aa28.77■■■□□ 2.2
CLIC4-204ENST00000497755 GJA3Q9Y6H8 435 aa28.77■■■□□ 2.2
CLIC4-204ENST00000497755 RIC1Q4ADV7 1423 aa28.77■■■□□ 2.2
CLIC4-204ENST00000497755 RASSF10A6NK89 507 aa28.76■■■□□ 2.19
CLIC4-204ENST00000497755 DEFB115Q30KQ5 88 aa28.76■■■□□ 2.19
CLIC4-204ENST00000497755 NTSR2O95665 410 aa28.75■■■□□ 2.19
CLIC4-204ENST00000497755 CTCFP49711 727 aaPredicted RBP28.75■■■□□ 2.19
CLIC4-204ENST00000497755 GIGYF2Q6Y7W6 1299 aaKnown RBP28.75■■■□□ 2.19
CLIC4-204ENST00000497755 C3orf67Q6ZVT6 689 aa28.75■■■□□ 2.19
CLIC4-204ENST00000497755 AIDAQ96BJ3 306 aa28.75■■■□□ 2.19
CLIC4-204ENST00000497755 RBM17Q96I25 401 aaKnown RBP28.75■■■□□ 2.19
CLIC4-204ENST00000497755 LARGE2Q8N3Y3 721 aa28.74■■■□□ 2.19
CLIC4-204ENST00000497755 TCERG1O14776 1098 aaKnown RBP28.73■■■□□ 2.19
CLIC4-204ENST00000497755 EPS15P42566 896 aa28.73■■■□□ 2.19
CLIC4-204ENST00000497755 LTBP1Q14766 1721 aa28.72■■■□□ 2.19
CLIC4-204ENST00000497755 PPEF1O14829 653 aaPredicted RBP28.72■■■□□ 2.19
CLIC4-204ENST00000497755 SCNN1DP51172 638 aa28.72■■■□□ 2.19
CLIC4-204ENST00000497755 LRP10Q7Z4F1 713 aa28.72■■■□□ 2.19
CLIC4-204ENST00000497755 ERBB4Q15303 1308 aa28.71■■■□□ 2.19
CLIC4-204ENST00000497755 LMOD1P29536 600 aaPredicted RBP28.71■■■□□ 2.19
CLIC4-204ENST00000497755 PDIA6Q15084 440 aa28.71■■■□□ 2.19
CLIC4-204ENST00000497755 DDX21Q9NR30 783 aaKnown RBP eCLIP28.71■■■□□ 2.19
CLIC4-204ENST00000497755 PPP1R42Q7Z4L9 355 aa28.7■■■□□ 2.18
CLIC4-204ENST00000497755 PNNQ9H307 717 aaKnown RBP28.7■■■□□ 2.18
CLIC4-204ENST00000497755 LBX1P52954 281 aa28.69■■■□□ 2.18
CLIC4-204ENST00000497755 FMR1Q06787 632 aaKnown RBP eCLIP28.69■■■□□ 2.18
CLIC4-204ENST00000497755 PARP10Q53GL7 1025 aa28.69■■■□□ 2.18
CLIC4-204ENST00000497755 SLC10A5Q5PT55 438 aa28.69■■■□□ 2.18
CLIC4-204ENST00000497755 NLRP3Q96P20 1036 aa28.69■■■□□ 2.18
CLIC4-204ENST00000497755 ABT1Q9ULW3 272 aaKnown RBP28.69■■■□□ 2.18
CLIC4-204ENST00000497755 WDR33Q9C0J8 1336 aaKnown RBP28.69■■■□□ 2.18
CLIC4-204ENST00000497755 TSPYL4Q9UJ04 414 aa28.68■■■□□ 2.18
CLIC4-204ENST00000497755 MAPK8IP3Q9UPT6 1336 aa28.68■■■□□ 2.18
CLIC4-204ENST00000497755 ATP6V0A2Q9Y487 856 aa28.67■■■□□ 2.18
CLIC4-204ENST00000497755 EIF2S2P20042 333 aaKnown RBP28.66■■■□□ 2.18
CLIC4-204ENST00000497755 USP50Q70EL3 339 aaPredicted RBP28.66■■■□□ 2.18
CLIC4-204ENST00000497755 NIM1KQ8IY84 436 aa28.66■■■□□ 2.18
CLIC4-204ENST00000497755 UTP14AQ9BVJ6 771 aaKnown RBP28.66■■■□□ 2.18
CLIC4-204ENST00000497755 PPIP5K2O43314 1243 aa28.65■■■□□ 2.18
CLIC4-204ENST00000497755 PROSER3Q2NL68 480 aa28.65■■■□□ 2.18
CLIC4-204ENST00000497755 ANXA1P04083 346 aa28.64■■■□□ 2.18
CLIC4-204ENST00000497755 MAP2K1Q02750 393 aaPredicted RBP28.64■■■□□ 2.18
CLIC4-204ENST00000497755 AOC3Q16853 763 aa28.64■■■□□ 2.18
CLIC4-204ENST00000497755 VPS33BQ9H267 617 aa28.64■■■□□ 2.18
CLIC4-204ENST00000497755 HSPA8P11142 646 aaKnown RBP28.63■■■□□ 2.17
CLIC4-204ENST00000497755 RIPK4P57078 832 aa28.63■■■□□ 2.17
CLIC4-204ENST00000497755 CST9Q5W186 159 aa28.63■■■□□ 2.17
CLIC4-204ENST00000497755 TMX4Q9H1E5 349 aaPredicted RBP28.63■■■□□ 2.17
CLIC4-204ENST00000497755 TRAF5O00463 557 aa28.62■■■□□ 2.17
CLIC4-204ENST00000497755 ABCC4O15439 1325 aa28.62■■■□□ 2.17
CLIC4-204ENST00000497755 CXCL9Q07325 125 aa28.61■■■□□ 2.17
CLIC4-204ENST00000497755 RTFDC1Q9BY42 306 aaPredicted RBP28.61■■■□□ 2.17
CLIC4-204ENST00000497755 BABAM1Q9NWV8 329 aa28.61■■■□□ 2.17
CLIC4-204ENST00000497755 GPRC5DQ9NZD1 345 aa28.61■■■□□ 2.17
CLIC4-204ENST00000497755 BBOX1O75936 387 aa28.6■■■□□ 2.17
CLIC4-204ENST00000497755 ZNRF3Q9ULT6 936 aa28.6■■■□□ 2.17
CLIC4-204ENST00000497755 COPS6Q7L5N1 327 aa28.59■■■□□ 2.17
CLIC4-204ENST00000497755 CAPNS2Q96L46 248 aa28.59■■■□□ 2.17
CLIC4-204ENST00000497755 ADARB2Q9NS39 739 aaKnown RBP28.59■■■□□ 2.17
CLIC4-204ENST00000497755 TRPM7Q96QT4 1865 aa28.58■■■□□ 2.17
CLIC4-204ENST00000497755 NLRP10Q86W26 655 aa28.58■■■□□ 2.17
CLIC4-204ENST00000497755 SP8Q8IXZ3 490 aa28.58■■■□□ 2.17
CLIC4-204ENST00000497755 SUPT20HQ8NEM7 779 aa28.58■■■□□ 2.17
CLIC4-204ENST00000497755 HCLS1P14317 486 aaPredicted RBP28.57■■■□□ 2.16
CLIC4-204ENST00000497755 CYP4F22Q6NT55 531 aa28.57■■■□□ 2.16
CLIC4-204ENST00000497755 TMPOP42166 694 aaKnown RBP28.56■■■□□ 2.16
CLIC4-204ENST00000497755 ECE1P42892 770 aa28.56■■■□□ 2.16
CLIC4-204ENST00000497755 AIMP1Q12904 312 aaKnown RBP28.56■■■□□ 2.16
CLIC4-204ENST00000497755 HSP90AB3PQ58FF7 597 aa28.56■■■□□ 2.16
CLIC4-204ENST00000497755 DPP8Q6V1X1 898 aaPredicted RBP28.56■■■□□ 2.16
CLIC4-204ENST00000497755 XAGE3Q8WTP9 111 aa28.56■■■□□ 2.16
CLIC4-204ENST00000497755 NECTIN2Q92692 538 aa28.56■■■□□ 2.16
CLIC4-204ENST00000497755 GPR101Q96P66 508 aaPredicted RBP28.56■■■□□ 2.16
CLIC4-204ENST00000497755 TLL2Q9Y6L7 1015 aa28.56■■■□□ 2.16
CLIC4-204ENST00000497755 GMPSP49915 693 aaPredicted RBP28.55■■■□□ 2.16
CLIC4-204ENST00000497755 TCIRG1Q13488 830 aa28.55■■■□□ 2.16
CLIC4-204ENST00000497755 PAXIP1Q6ZW49 1069 aaPredicted RBP28.55■■■□□ 2.16
CLIC4-204ENST00000497755 MPNDQ8N594 471 aa28.55■■■□□ 2.16
CLIC4-204ENST00000497755 LAMB2P55268 1798 aa28.53■■■□□ 2.16
CLIC4-204ENST00000497755 KIAA2012Q0VF49 1180 aa28.53■■■□□ 2.16
CLIC4-204ENST00000497755 GRM1Q13255 1194 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms