RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 HOMEZQ8IX15 550 aa9.61□□□□□ -0.87
MSH5-219ENST00000497269 CCDC155Q8N6L0 562 aa9.61□□□□□ -0.87
MSH5-219ENST00000497269 RUBCNLQ9H714 662 aa9.61□□□□□ -0.87
MSH5-219ENST00000497269 EFCAB5A4FU69 1503 aa9.61□□□□□ -0.87
MSH5-219ENST00000497269 HECW1Q76N89 1606 aa9.6□□□□□ -0.87
MSH5-219ENST00000497269 MSX1P28360 303 aa9.6□□□□□ -0.87
MSH5-219ENST00000497269 BICDL1Q6ZP65 573 aa9.6□□□□□ -0.87
MSH5-219ENST00000497269 C2orf49Q9BVC5 232 aaPredicted RBP9.6□□□□□ -0.87
MSH5-219ENST00000497269 PHACTR1Q9C0D0 580 aa9.6□□□□□ -0.87
MSH5-219ENST00000497269 KIF14Q15058 1648 aa9.6□□□□□ -0.87
MSH5-219ENST00000497269 PLCH2O75038 1416 aa9.59□□□□□ -0.87
MSH5-219ENST00000497269 SLC35F4A4IF30 521 aa9.59□□□□□ -0.87
MSH5-219ENST00000497269 PDIA4P13667 645 aaKnown RBP9.59□□□□□ -0.87
MSH5-219ENST00000497269 ARSJQ5FYB0 599 aaPredicted RBP9.59□□□□□ -0.87
MSH5-219ENST00000497269 FBXO41Q8TF61 875 aa9.59□□□□□ -0.87
MSH5-219ENST00000497269 ZFYVE16Q7Z3T8 1539 aa9.59□□□□□ -0.87
MSH5-219ENST00000497269 ARHGEF40Q8TER5 1519 aa9.58□□□□□ -0.88
MSH5-219ENST00000497269 A0A1B0GTH6 734 aa9.58□□□□□ -0.88
MSH5-219ENST00000497269 FOXO3O43524 673 aa9.58□□□□□ -0.88
MSH5-219ENST00000497269 TATP17735 454 aaPredicted RBP9.58□□□□□ -0.88
MSH5-219ENST00000497269 SSFA2P28290 1259 aa9.58□□□□□ -0.88
MSH5-219ENST00000497269 ALDH16A1Q8IZ83 802 aa9.58□□□□□ -0.88
MSH5-219ENST00000497269 CDK11AQ9UQ88 783 aaPredicted RBP9.58□□□□□ -0.88
MSH5-219ENST00000497269 LMTK3Q96Q04 1460 aa9.58□□□□□ -0.88
MSH5-219ENST00000497269 LRRIQ1Q96JM4 1722 aa9.57□□□□□ -0.88
MSH5-219ENST00000497269 CDC14CA4D256 554 aa9.57□□□□□ -0.88
MSH5-219ENST00000497269 PDE4CQ08493 712 aa9.57□□□□□ -0.88
MSH5-219ENST00000497269 RHPN1Q8TCX5 695 aa9.57□□□□□ -0.88
MSH5-219ENST00000497269 KLRG1Q96E93 195 aa9.57□□□□□ -0.88
MSH5-219ENST00000497269 CUEDC1Q9NWM3 386 aaPredicted RBP9.57□□□□□ -0.88
MSH5-219ENST00000497269 SEPT3Q9UH03 358 aa9.57□□□□□ -0.88
MSH5-219ENST00000497269 DYRK1BQ9Y463 629 aa9.57□□□□□ -0.88
MSH5-219ENST00000497269 PCF11O94913 1555 aaKnown RBP9.57□□□□□ -0.88
MSH5-219ENST00000497269 CFAP74Q9C0B2 1584 aa9.57□□□□□ -0.88
MSH5-219ENST00000497269 POGZQ7Z3K3 1410 aa9.56□□□□□ -0.88
MSH5-219ENST00000497269 ARHGAP5Q13017 1502 aa9.56□□□□□ -0.88
MSH5-219ENST00000497269 PPFIA3O75145 1194 aa9.56□□□□□ -0.88
MSH5-219ENST00000497269 ATP4AP20648 1035 aa9.56□□□□□ -0.88
MSH5-219ENST00000497269 WDR44Q5JSH3 913 aa9.56□□□□□ -0.88
MSH5-219ENST00000497269 PHLDB3Q6NSJ2 640 aa9.56□□□□□ -0.88
MSH5-219ENST00000497269 AEBP1Q8IUX7 1158 aa9.56□□□□□ -0.88
MSH5-219ENST00000497269 FMN1Q68DA7 1419 aa9.56□□□□□ -0.88
MSH5-219ENST00000497269 F11P03951 625 aa9.55□□□□□ -0.88
MSH5-219ENST00000497269 PGBD3Q8N328 593 aa9.55□□□□□ -0.88
MSH5-219ENST00000497269 MYO5CQ9NQX4 1742 aa9.55□□□□□ -0.88
MSH5-219ENST00000497269 ITGA6P23229 1130 aa9.54□□□□□ -0.88
MSH5-219ENST00000497269 HSH2DQ96JZ2 352 aa9.54□□□□□ -0.88
MSH5-219ENST00000497269 SAP130Q9H0E3 1048 aa9.54□□□□□ -0.88
MSH5-219ENST00000497269 KLK14Q9P0G3 267 aa9.54□□□□□ -0.88
MSH5-219ENST00000497269 GJA3Q9Y6H8 435 aa9.54□□□□□ -0.88
MSH5-219ENST00000497269 FER1L4A9Z1Z3 1794 aa9.54□□□□□ -0.88
MSH5-219ENST00000497269 ATP10AO60312 1499 aa9.53□□□□□ -0.88
MSH5-219ENST00000497269 ZMYM4Q5VZL5 1548 aa9.53□□□□□ -0.88
MSH5-219ENST00000497269 ABL1P00519 1130 aa9.53□□□□□ -0.88
MSH5-219ENST00000497269 HNRNPMP52272 730 aaKnown RBP eCLIP9.53□□□□□ -0.88
MSH5-219ENST00000497269 B4GALNT3Q6L9W6 998 aa9.53□□□□□ -0.88
MSH5-219ENST00000497269 LRRC69Q6ZNQ3 347 aa9.53□□□□□ -0.88
MSH5-219ENST00000497269 STAG2Q8N3U4 1231 aa9.53□□□□□ -0.88
MSH5-219ENST00000497269 QTRT2Q9H974 415 aaKnown RBP9.53□□□□□ -0.88
MSH5-219ENST00000497269 NEUROD4Q9HD90 331 aa9.53□□□□□ -0.88
MSH5-219ENST00000497269 ANO2Q9NQ90 1003 aa9.53□□□□□ -0.88
MSH5-219ENST00000497269 ZDHHC3Q9NYG2 299 aa9.53□□□□□ -0.88
MSH5-219ENST00000497269 NXF1Q9UBU9 619 aaKnown RBP9.53□□□□□ -0.88
MSH5-219ENST00000497269 TROQ12816 1431 aaPredicted RBP9.53□□□□□ -0.88
MSH5-219ENST00000497269 A0A1W2PNR3 127 aa9.52□□□□□ -0.89
MSH5-219ENST00000497269 DGKZQ13574 1117 aa9.52□□□□□ -0.89
MSH5-219ENST00000497269 DBN1Q16643 649 aa9.52□□□□□ -0.89
MSH5-219ENST00000497269 TRAIPQ9BWF2 469 aa9.52□□□□□ -0.89
MSH5-219ENST00000497269 NUCKS1Q9H1E3 243 aaKnown RBP9.52□□□□□ -0.89
MSH5-219ENST00000497269 CDC42BPBQ9Y5S2 1711 aa9.51□□□□□ -0.89
MSH5-219ENST00000497269 CLIP1P30622 1438 aa9.51□□□□□ -0.89
MSH5-219ENST00000497269 C9orf84Q5VXU9 1444 aa9.51□□□□□ -0.89
MSH5-219ENST00000497269 TRAPPC8Q9Y2L5 1435 aa9.51□□□□□ -0.89
MSH5-219ENST00000497269 GPR25O00155 361 aa9.51□□□□□ -0.89
MSH5-219ENST00000497269 SERPINB4P48594 390 aa9.51□□□□□ -0.89
MSH5-219ENST00000497269 HIRAP54198 1017 aaPredicted RBP9.51□□□□□ -0.89
MSH5-219ENST00000497269 MTMR3Q13615 1198 aa9.51□□□□□ -0.89
MSH5-219ENST00000497269 VWA5B2Q8N398 1253 aa9.51□□□□□ -0.89
MSH5-219ENST00000497269 ZIC5Q96T25 663 aa9.51□□□□□ -0.89
MSH5-219ENST00000497269 LRFN2Q9ULH4 789 aa9.51□□□□□ -0.89
MSH5-219ENST00000497269 MAGI2Q86UL8 1455 aa9.51□□□□□ -0.89
MSH5-219ENST00000497269 ARHGEF12Q9NZN5 1544 aa9.51□□□□□ -0.89
MSH5-219ENST00000497269 PTCD1O75127 700 aaKnown RBP9.5□□□□□ -0.89
MSH5-219ENST00000497269 ZNF211Q13398 564 aaPredicted RBP9.5□□□□□ -0.89
MSH5-219ENST00000497269 EFHC2Q5JST6 749 aa9.5□□□□□ -0.89
MSH5-219ENST00000497269 COX20Q5RI15 118 aa9.5□□□□□ -0.89
MSH5-219ENST00000497269 POTEAQ6S8J7 498 aa9.5□□□□□ -0.89
MSH5-219ENST00000497269 ZNF280CQ8ND82 737 aa9.5□□□□□ -0.89
MSH5-219ENST00000497269 GTPBP3Q969Y2 492 aaKnown RBP9.5□□□□□ -0.89
MSH5-219ENST00000497269 ZNF837Q96EG3 531 aaPredicted RBP9.5□□□□□ -0.89
MSH5-219ENST00000497269 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.5□□□□□ -0.89
MSH5-219ENST00000497269 THBS1P07996 1170 aa9.49□□□□□ -0.89
MSH5-219ENST00000497269 RTN1Q16799 776 aa9.49□□□□□ -0.89
MSH5-219ENST00000497269 C1orf53Q5VUE5 145 aa9.49□□□□□ -0.89
MSH5-219ENST00000497269 C16orf46Q6P387 395 aa9.49□□□□□ -0.89
MSH5-219ENST00000497269 C1orf216Q8TAB5 229 aa9.49□□□□□ -0.89
MSH5-219ENST00000497269 GTF3C2Q8WUA4 911 aaPredicted RBP9.49□□□□□ -0.89
MSH5-219ENST00000497269 ZNF518AQ6AHZ1 1483 aa9.48□□□□□ -0.89
MSH5-219ENST00000497269 H7C1W4 665 aa9.48□□□□□ -0.89
MSH5-219ENST00000497269 TERTO14746 1132 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms