RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 FER1L6Q2WGJ9 1857 aa18.72■□□□□ 0.59
PDAP1-204ENST00000496335 HSP90AB3PQ58FF7 597 aa18.72■□□□□ 0.59
PDAP1-204ENST00000496335 NLRP10Q86W26 655 aa18.72■□□□□ 0.59
PDAP1-204ENST00000496335 UTP14AQ9BVJ6 771 aaKnown RBP18.72■□□□□ 0.59
PDAP1-204ENST00000496335 CRY2Q49AN0 593 aa18.71■□□□□ 0.59
PDAP1-204ENST00000496335 C3orf67Q6ZVT6 689 aa18.71■□□□□ 0.59
PDAP1-204ENST00000496335 TCERG1O14776 1098 aaKnown RBP18.7■□□□□ 0.58
PDAP1-204ENST00000496335 LMNB1P20700 586 aa18.7■□□□□ 0.58
PDAP1-204ENST00000496335 WDR63Q8IWG1 891 aa18.7■□□□□ 0.58
PDAP1-204ENST00000496335 SYNE4Q8N205 404 aa18.7■□□□□ 0.58
PDAP1-204ENST00000496335 C7orf43Q8WVR3 580 aa18.7■□□□□ 0.58
PDAP1-204ENST00000496335 RIC1Q4ADV7 1423 aa18.69■□□□□ 0.58
PDAP1-204ENST00000496335 ATP5J2-PTCD1G3V325 749 aa18.69■□□□□ 0.58
PDAP1-204ENST00000496335 CCDC30Q5VVM6 783 aa18.69■□□□□ 0.58
PDAP1-204ENST00000496335 OLFM4Q6UX06 510 aa18.69■□□□□ 0.58
PDAP1-204ENST00000496335 ALDH1B1P30837 517 aa18.68■□□□□ 0.58
PDAP1-204ENST00000496335 C1QTNF8P60827 252 aa18.68■□□□□ 0.58
PDAP1-204ENST00000496335 TWISTNBQ3B726 338 aaPredicted RBP18.68■□□□□ 0.58
PDAP1-204ENST00000496335 RPGRQ92834 1020 aaKnown RBP18.68■□□□□ 0.58
PDAP1-204ENST00000496335 SPINK5Q9NQ38 1064 aaPredicted RBP18.68■□□□□ 0.58
PDAP1-204ENST00000496335 TRMT112Q9UI30 125 aaKnown RBP18.68■□□□□ 0.58
PDAP1-204ENST00000496335 FANCIQ9NVI1 1328 aa18.68■□□□□ 0.58
PDAP1-204ENST00000496335 HCLS1P14317 486 aaPredicted RBP18.67■□□□□ 0.58
PDAP1-204ENST00000496335 GOLGA2Q08379 1002 aa18.67■□□□□ 0.58
PDAP1-204ENST00000496335 SLC10A5Q5PT55 438 aa18.67■□□□□ 0.58
PDAP1-204ENST00000496335 RIC3Q7Z5B4 369 aa18.67■□□□□ 0.58
PDAP1-204ENST00000496335 NLRP3Q96P20 1036 aa18.67■□□□□ 0.58
PDAP1-204ENST00000496335 ISCA1Q9BUE6 129 aa18.67■□□□□ 0.58
PDAP1-204ENST00000496335 LAMB2P55268 1798 aa18.66■□□□□ 0.58
PDAP1-204ENST00000496335 HOXA10P31260 410 aaPredicted RBP18.66■□□□□ 0.58
PDAP1-204ENST00000496335 SOGA3Q5TF21 947 aa18.66■□□□□ 0.58
PDAP1-204ENST00000496335 CHMP4AQ9BY43 222 aa18.66■□□□□ 0.58
PDAP1-204ENST00000496335 TAOK3Q9H2K8 898 aa18.66■□□□□ 0.58
PDAP1-204ENST00000496335 RNF123Q5XPI4 1314 aa18.66■□□□□ 0.58
PDAP1-204ENST00000496335 DICER1Q9UPY3 1922 aaKnown RBP18.65■□□□□ 0.58
PDAP1-204ENST00000496335 CCDC93Q567U6 631 aa18.65■□□□□ 0.58
PDAP1-204ENST00000496335 NMRK2Q9NPI5 230 aa18.65■□□□□ 0.58
PDAP1-204ENST00000496335 SH3TC1Q8TE82 1336 aa18.65■□□□□ 0.58
PDAP1-204ENST00000496335 TIAM2Q8IVF5 1701 aa18.65■□□□□ 0.58
PDAP1-204ENST00000496335 KIF3CO14782 793 aa18.64■□□□□ 0.57
PDAP1-204ENST00000496335 EXOSC9Q06265 439 aaKnown RBP18.64■□□□□ 0.57
PDAP1-204ENST00000496335 SLC51AQ86UW1 340 aa18.64■□□□□ 0.57
PDAP1-204ENST00000496335 FAM89AQ96GI7 184 aa18.64■□□□□ 0.57
PDAP1-204ENST00000496335 RBM17Q96I25 401 aaKnown RBP18.64■□□□□ 0.57
PDAP1-204ENST00000496335 STK31Q9BXU1 1019 aa18.64■□□□□ 0.57
PDAP1-204ENST00000496335 LTBP3Q9NS15 1303 aa18.64■□□□□ 0.57
PDAP1-204ENST00000496335 RTL5Q5HYW3 569 aaPredicted RBP18.63■□□□□ 0.57
PDAP1-204ENST00000496335 CRAMP1Q96RY5 1269 aa18.63■□□□□ 0.57
PDAP1-204ENST00000496335 MYD88Q99836 296 aa18.63■□□□□ 0.57
PDAP1-204ENST00000496335 TAF1P21675 1872 aa18.63■□□□□ 0.57
PDAP1-204ENST00000496335 VAMP4O75379 141 aa18.62■□□□□ 0.57
PDAP1-204ENST00000496335 DDX58O95786 925 aaKnown RBP18.62■□□□□ 0.57
PDAP1-204ENST00000496335 SLC4A2P04920 1241 aa18.62■□□□□ 0.57
PDAP1-204ENST00000496335 TRIM28Q13263 835 aaKnown RBP18.62■□□□□ 0.57
PDAP1-204ENST00000496335 G2E3Q7L622 706 aa18.62■□□□□ 0.57
PDAP1-204ENST00000496335 DDX60Q8IY21 1712 aaKnown RBP18.62■□□□□ 0.57
PDAP1-204ENST00000496335 KDM2BQ8NHM5 1336 aa18.61■□□□□ 0.57
PDAP1-204ENST00000496335 ZC3H4Q9UPT8 1303 aaKnown RBP18.61■□□□□ 0.57
PDAP1-204ENST00000496335 RTKN2Q8IZC4 609 aa18.61■□□□□ 0.57
PDAP1-204ENST00000496335 MAP3K2Q9Y2U5 619 aa18.61■□□□□ 0.57
PDAP1-204ENST00000496335 ABCC4O15439 1325 aa18.6■□□□□ 0.57
PDAP1-204ENST00000496335 ZNF521Q96K83 1311 aa18.6■□□□□ 0.57
PDAP1-204ENST00000496335 PI4KAP2A4QPH2 592 aa18.6■□□□□ 0.57
PDAP1-204ENST00000496335 PPEF1O14829 653 aaPredicted RBP18.6■□□□□ 0.57
PDAP1-204ENST00000496335 FKBP4Q02790 459 aaKnown RBP eCLIP18.6■□□□□ 0.57
PDAP1-204ENST00000496335 KSR2Q6VAB6 950 aa18.6■□□□□ 0.57
PDAP1-204ENST00000496335 PI4KAP1Q8N8J0 262 aa18.6■□□□□ 0.57
PDAP1-204ENST00000496335 METTL22Q9BUU2 404 aaPredicted RBP18.6■□□□□ 0.57
PDAP1-204ENST00000496335 MYH16Q9H6N6 1097 aa18.6■□□□□ 0.57
PDAP1-204ENST00000496335 RRAGCQ9HB90 399 aa18.6■□□□□ 0.57
PDAP1-204ENST00000496335 ZNF277Q9NRM2 450 aaPredicted RBP18.6■□□□□ 0.57
PDAP1-204ENST00000496335 CACNA1FO60840 1977 aa18.6■□□□□ 0.57
PDAP1-204ENST00000496335 GLTPD2A6NH11 291 aa18.59■□□□□ 0.57
PDAP1-204ENST00000496335 CCER2I3L3R5 266 aa18.59■□□□□ 0.57
PDAP1-204ENST00000496335 SNED1Q8TER0 1413 aa18.58■□□□□ 0.57
PDAP1-204ENST00000496335 JARID2Q92833 1246 aaPredicted RBP18.58■□□□□ 0.56
PDAP1-204ENST00000496335 IRS4O14654 1257 aaPredicted RBP18.57■□□□□ 0.56
PDAP1-204ENST00000496335 CC2D2BQ6DHV5 1058 aa18.57■□□□□ 0.56
PDAP1-204ENST00000496335 DDX46Q7L014 1031 aaKnown RBP18.57■□□□□ 0.56
PDAP1-204ENST00000496335 ZBTB38Q8NAP3 1195 aaPredicted RBP18.57■□□□□ 0.56
PDAP1-204ENST00000496335 CCDC191Q8NCU4 936 aa18.57■□□□□ 0.56
PDAP1-204ENST00000496335 IGKV5-2P06315 115 aa18.56■□□□□ 0.56
PDAP1-204ENST00000496335 FLIIQ13045 1269 aa18.56■□□□□ 0.56
PDAP1-204ENST00000496335 PSMD1Q99460 953 aa18.56■□□□□ 0.56
PDAP1-204ENST00000496335 CWC25Q9NXE8 425 aaPredicted RBP18.56■□□□□ 0.56
PDAP1-204ENST00000496335 BBOX1O75936 387 aa18.55■□□□□ 0.56
PDAP1-204ENST00000496335 PCCAP05165 728 aaPredicted RBP18.55■□□□□ 0.56
PDAP1-204ENST00000496335 SF3B3Q15393 1217 aaKnown RBP18.55■□□□□ 0.56
PDAP1-204ENST00000496335 DPY19L2Q6NUT2 758 aa18.55■□□□□ 0.56
PDAP1-204ENST00000496335 ATP6V0A2Q9Y487 856 aa18.55■□□□□ 0.56
PDAP1-204ENST00000496335 TOMM70O94826 608 aa18.54■□□□□ 0.56
PDAP1-204ENST00000496335 IARSP41252 1262 aaKnown RBP18.54■□□□□ 0.56
PDAP1-204ENST00000496335 FKBP5Q13451 457 aaPredicted RBP18.54■□□□□ 0.56
PDAP1-204ENST00000496335 GRAPQ13588 217 aa18.54■□□□□ 0.56
PDAP1-204ENST00000496335 CWF19L2Q2TBE0 894 aaKnown RBP18.54■□□□□ 0.56
PDAP1-204ENST00000496335 GRAPLQ8TC17 118 aaPredicted RBP18.54■□□□□ 0.56
PDAP1-204ENST00000496335 DDNO94850 711 aaPredicted RBP18.53■□□□□ 0.56
PDAP1-204ENST00000496335 NEXNQ0ZGT2 675 aa18.53■□□□□ 0.56
PDAP1-204ENST00000496335 COL4A1P02462 1669 aa18.53■□□□□ 0.56
PDAP1-204ENST00000496335 POTECB2RU33 542 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms