RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 RTL5Q5HYW3 569 aaPredicted RBP13.97□□□□□ -0.17
RFTN1-211ENST00000495666 HDGFL1Q5TGJ6 251 aa13.97□□□□□ -0.17
RFTN1-211ENST00000495666 GIGYF2Q6Y7W6 1299 aaKnown RBP13.97□□□□□ -0.17
RFTN1-211ENST00000495666 SYNE4Q8N205 404 aa13.97□□□□□ -0.17
RFTN1-211ENST00000495666 GJA3Q9Y6H8 435 aa13.97□□□□□ -0.17
RFTN1-211ENST00000495666 APAF1O14727 1248 aa13.96□□□□□ -0.17
RFTN1-211ENST00000495666 PPEF1O14829 653 aaPredicted RBP13.96□□□□□ -0.17
RFTN1-211ENST00000495666 HCLS1P14317 486 aaPredicted RBP13.96□□□□□ -0.17
RFTN1-211ENST00000495666 PDIA6Q15084 440 aa13.96□□□□□ -0.17
RFTN1-211ENST00000495666 PPP1R42Q7Z4L9 355 aa13.96□□□□□ -0.17
RFTN1-211ENST00000495666 LTBP3Q9NS15 1303 aa13.95□□□□□ -0.18
RFTN1-211ENST00000495666 POTECB2RU33 542 aa13.95□□□□□ -0.18
RFTN1-211ENST00000495666 IARSP41252 1262 aaKnown RBP13.95□□□□□ -0.18
RFTN1-211ENST00000495666 ZNF34Q8IZ26 560 aa13.95□□□□□ -0.18
RFTN1-211ENST00000495666 C7orf43Q8WVR3 580 aa13.95□□□□□ -0.18
RFTN1-211ENST00000495666 RBM17Q96I25 401 aaKnown RBP13.95□□□□□ -0.18
RFTN1-211ENST00000495666 UTP14AQ9BVJ6 771 aaKnown RBP13.95□□□□□ -0.18
RFTN1-211ENST00000495666 CLEC11AQ9Y240 323 aa13.95□□□□□ -0.18
RFTN1-211ENST00000495666 ERBB4Q15303 1308 aa13.94□□□□□ -0.18
RFTN1-211ENST00000495666 RNF123Q5XPI4 1314 aa13.94□□□□□ -0.18
RFTN1-211ENST00000495666 ATP5J2-PTCD1G3V325 749 aa13.94□□□□□ -0.18
RFTN1-211ENST00000495666 RTKN2Q8IZC4 609 aa13.94□□□□□ -0.18
RFTN1-211ENST00000495666 TRMT112Q9UI30 125 aaKnown RBP13.94□□□□□ -0.18
RFTN1-211ENST00000495666 KLRG2A4D1S0 409 aaPredicted RBP13.93□□□□□ -0.18
RFTN1-211ENST00000495666 CCDC184Q52MB2 194 aa13.93□□□□□ -0.18
RFTN1-211ENST00000495666 LRP10Q7Z4F1 713 aa13.93□□□□□ -0.18
RFTN1-211ENST00000495666 LARGE2Q8N3Y3 721 aa13.93□□□□□ -0.18
RFTN1-211ENST00000495666 NLRP3Q96P20 1036 aa13.93□□□□□ -0.18
RFTN1-211ENST00000495666 MBIPQ9NS73 344 aa13.93□□□□□ -0.18
RFTN1-211ENST00000495666 COL4A5P29400 1685 aa13.92□□□□□ -0.18
RFTN1-211ENST00000495666 CHL1O00533 1208 aa13.92□□□□□ -0.18
RFTN1-211ENST00000495666 CRY2Q49AN0 593 aa13.92□□□□□ -0.18
RFTN1-211ENST00000495666 PARP10Q53GL7 1025 aa13.92□□□□□ -0.18
RFTN1-211ENST00000495666 DUSP27Q5VZP5 1158 aa13.92□□□□□ -0.18
RFTN1-211ENST00000495666 DNAJC5GQ8N7S2 189 aa13.92□□□□□ -0.18
RFTN1-211ENST00000495666 JDP2Q8WYK2 163 aa13.92□□□□□ -0.18
RFTN1-211ENST00000495666 KLRG1Q96E93 195 aa13.92□□□□□ -0.18
RFTN1-211ENST00000495666 TMX4Q9H1E5 349 aaPredicted RBP13.92□□□□□ -0.18
RFTN1-211ENST00000495666 DDX21Q9NR30 783 aaKnown RBP eCLIP13.92□□□□□ -0.18
RFTN1-211ENST00000495666 SALL2Q9Y467 1007 aaPredicted RBP13.92□□□□□ -0.18
RFTN1-211ENST00000495666 ABCC4O15439 1325 aa13.91□□□□□ -0.18
RFTN1-211ENST00000495666 DDX60Q8IY21 1712 aaKnown RBP13.91□□□□□ -0.18
RFTN1-211ENST00000495666 RGL2O15211 777 aa13.91□□□□□ -0.18
RFTN1-211ENST00000495666 AOC3Q16853 763 aa13.91□□□□□ -0.18
RFTN1-211ENST00000495666 CHADLQ6NUI6 762 aa13.91□□□□□ -0.18
RFTN1-211ENST00000495666 NLRP10Q86W26 655 aa13.91□□□□□ -0.18
RFTN1-211ENST00000495666 MKRN1Q9UHC7 482 aaKnown RBP13.91□□□□□ -0.18
RFTN1-211ENST00000495666 SCN4AP35499 1836 aa13.91□□□□□ -0.18
RFTN1-211ENST00000495666 IQCA1LA6NCM1 817 aa13.9□□□□□ -0.18
RFTN1-211ENST00000495666 PPIP5K2O43314 1243 aa13.9□□□□□ -0.18
RFTN1-211ENST00000495666 EIF6P56537 245 aaKnown RBP13.9□□□□□ -0.18
RFTN1-211ENST00000495666 HSP90AB3PQ58FF7 597 aa13.9□□□□□ -0.18
RFTN1-211ENST00000495666 JARID2Q92833 1246 aaPredicted RBP13.9□□□□□ -0.18
RFTN1-211ENST00000495666 IBTKQ9P2D0 1353 aaPredicted RBP13.9□□□□□ -0.18
RFTN1-211ENST00000495666 EPHX2P34913 555 aa13.89□□□□□ -0.19
RFTN1-211ENST00000495666 TCIRG1Q13488 830 aa13.89□□□□□ -0.19
RFTN1-211ENST00000495666 TSR2Q969E8 191 aaKnown RBP13.89□□□□□ -0.19
RFTN1-211ENST00000495666 FAM89AQ96GI7 184 aa13.89□□□□□ -0.19
RFTN1-211ENST00000495666 CFAP44Q96MT7 982 aa13.89□□□□□ -0.19
RFTN1-211ENST00000495666 TAF1DQ9H5J8 278 aaPredicted RBP13.89□□□□□ -0.19
RFTN1-211ENST00000495666 PHAXQ9H814 394 aaKnown RBP13.89□□□□□ -0.19
RFTN1-211ENST00000495666 BABAM1Q9NWV8 329 aa13.89□□□□□ -0.19
RFTN1-211ENST00000495666 HACL1Q9UJ83 578 aa13.89□□□□□ -0.19
RFTN1-211ENST00000495666 RIC1Q4ADV7 1423 aa13.89□□□□□ -0.19
RFTN1-211ENST00000495666 SH3TC1Q8TE82 1336 aa13.89□□□□□ -0.19
RFTN1-211ENST00000495666 MAP1SQ66K74 1059 aaPredicted RBP13.88□□□□□ -0.19
RFTN1-211ENST00000495666 ANKRD13DQ6ZTN6 518 aa13.88□□□□□ -0.19
RFTN1-211ENST00000495666 DDX46Q7L014 1031 aaKnown RBP13.88□□□□□ -0.19
RFTN1-211ENST00000495666 RIC3Q7Z5B4 369 aa13.88□□□□□ -0.19
RFTN1-211ENST00000495666 NIM1KQ8IY84 436 aa13.88□□□□□ -0.19
RFTN1-211ENST00000495666 CCDC85AQ96PX6 553 aaPredicted RBP13.88□□□□□ -0.19
RFTN1-211ENST00000495666 CRAMP1Q96RY5 1269 aa13.88□□□□□ -0.19
RFTN1-211ENST00000495666 DBF4Q9UBU7 674 aaPredicted RBP13.88□□□□□ -0.19
RFTN1-211ENST00000495666 LMOD1P29536 600 aaPredicted RBP13.87□□□□□ -0.19
RFTN1-211ENST00000495666 HOXA10P31260 410 aaPredicted RBP13.87□□□□□ -0.19
RFTN1-211ENST00000495666 GOLGA2Q08379 1002 aa13.87□□□□□ -0.19
RFTN1-211ENST00000495666 DPP8Q6V1X1 898 aaPredicted RBP13.87□□□□□ -0.19
RFTN1-211ENST00000495666 PSMD1Q99460 953 aa13.87□□□□□ -0.19
RFTN1-211ENST00000495666 MYD88Q99836 296 aa13.87□□□□□ -0.19
RFTN1-211ENST00000495666 LTBP1Q14766 1721 aa13.87□□□□□ -0.19
RFTN1-211ENST00000495666 COL4A1P02462 1669 aa13.86□□□□□ -0.19
RFTN1-211ENST00000495666 SPEF2Q9C093 1822 aa13.86□□□□□ -0.19
RFTN1-211ENST00000495666 CAPN15O75808 1086 aa13.86□□□□□ -0.19
RFTN1-211ENST00000495666 GNAI1P63096 354 aa13.86□□□□□ -0.19
RFTN1-211ENST00000495666 GRM1Q13255 1194 aa13.86□□□□□ -0.19
RFTN1-211ENST00000495666 LDHDQ86WU2 507 aa13.86□□□□□ -0.19
RFTN1-211ENST00000495666 C8orf58Q8NAV2 365 aa13.86□□□□□ -0.19
RFTN1-211ENST00000495666 PLBD2Q8NHP8 589 aa13.86□□□□□ -0.19
RFTN1-211ENST00000495666 MRS2Q9HD23 443 aa13.86□□□□□ -0.19
RFTN1-211ENST00000495666 HYPKQ9NX55 129 aa13.86□□□□□ -0.19
RFTN1-211ENST00000495666 SNED1Q8TER0 1413 aa13.86□□□□□ -0.19
RFTN1-211ENST00000495666 PCNTO95613 3336 aa13.86□□□□□ -0.19
RFTN1-211ENST00000495666 FZD9O00144 591 aa13.85□□□□□ -0.19
RFTN1-211ENST00000495666 CC2D2BQ6DHV5 1058 aa13.85□□□□□ -0.19
RFTN1-211ENST00000495666 PAXIP1Q6ZW49 1069 aaPredicted RBP13.85□□□□□ -0.19
RFTN1-211ENST00000495666 L3MBTL3Q96JM7 780 aaPredicted RBP13.85□□□□□ -0.19
RFTN1-211ENST00000495666 GPR101Q96P66 508 aaPredicted RBP13.85□□□□□ -0.19
RFTN1-211ENST00000495666 IFT57Q9NWB7 429 aa13.85□□□□□ -0.19
RFTN1-211ENST00000495666 ATP6V0A2Q9Y487 856 aa13.85□□□□□ -0.19
RFTN1-211ENST00000495666 RIMBP2O15034 1052 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms