RNA–Protein interactions for RNA: ENST00000495166.1

IFT22-208, Transcript of intraflagellar transport 22, human

TSL 2

Gene IFT22, Length 567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT22-208	ENST00000495166	USP31	Q70CQ4	1352 aa		11.25	□□□□□ -0.61
IFT22-208	ENST00000495166	LMOD1	P29536	600 aa	Predicted RBP	11.24	□□□□□ -0.61
IFT22-208	ENST00000495166	TMF1	P82094	1093 aa		11.24	□□□□□ -0.61
IFT22-208	ENST00000495166	SEMA3F	Q13275	785 aa		11.24	□□□□□ -0.61
IFT22-208	ENST00000495166		A0A1W2PP64	1363 aa		11.24	□□□□□ -0.61
IFT22-208	ENST00000495166	USP54	Q70EL1	1684 aa		11.24	□□□□□ -0.61
IFT22-208	ENST00000495166	LMO7	Q8WWI1	1683 aa		11.24	□□□□□ -0.61
IFT22-208	ENST00000495166	PPEF1	O14829	653 aa	Predicted RBP	11.23	□□□□□ -0.61
IFT22-208	ENST00000495166	S1PR4	O95977	384 aa		11.23	□□□□□ -0.61
IFT22-208	ENST00000495166	ZC3H6	P61129	1189 aa	Known RBP	11.23	□□□□□ -0.61
IFT22-208	ENST00000495166	SLC6A16	Q9GZN6	736 aa		11.23	□□□□□ -0.61
IFT22-208	ENST00000495166	TERF2IP	Q9NYB0	399 aa		11.23	□□□□□ -0.61
IFT22-208	ENST00000495166	EDC4	Q6P2E9	1401 aa	Known RBP	11.23	□□□□□ -0.61
IFT22-208	ENST00000495166	CHRNA2	Q15822	529 aa		11.22	□□□□□ -0.61
IFT22-208	ENST00000495166	SPATA31A5	Q5VU36	1347 aa		11.22	□□□□□ -0.61
IFT22-208	ENST00000495166	AATK	Q6ZMQ8	1374 aa		11.22	□□□□□ -0.61
IFT22-208	ENST00000495166	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.22	□□□□□ -0.61
IFT22-208	ENST00000495166	SPATA31A7	Q8IWB4	1347 aa		11.22	□□□□□ -0.61
IFT22-208	ENST00000495166	TMC1	Q8TDI8	760 aa		11.22	□□□□□ -0.61
IFT22-208	ENST00000495166	IL21	Q9HBE4	155 aa		11.22	□□□□□ -0.61
IFT22-208	ENST00000495166	CAMTA1	Q9Y6Y1	1673 aa		11.22	□□□□□ -0.61
IFT22-208	ENST00000495166	PDIA4	P13667	645 aa	Known RBP	11.21	□□□□□ -0.61
IFT22-208	ENST00000495166	ARHGEF25	Q86VW2	580 aa		11.21	□□□□□ -0.61
IFT22-208	ENST00000495166	UNC93B1	Q9H1C4	597 aa		11.21	□□□□□ -0.61
IFT22-208	ENST00000495166	NFAT5	O94916	1531 aa		11.2	□□□□□ -0.62
IFT22-208	ENST00000495166	ANKRD36B	Q8N2N9	1353 aa		11.2	□□□□□ -0.62
IFT22-208	ENST00000495166	KCNH5	Q8NCM2	988 aa		11.2	□□□□□ -0.62
IFT22-208	ENST00000495166	FAM174A	Q8TBP5	190 aa		11.2	□□□□□ -0.62
IFT22-208	ENST00000495166	COL18A1	P39060	1754 aa		11.2	□□□□□ -0.62
IFT22-208	ENST00000495166	OVOS2	A0A0J9YW53	1432 aa		11.19	□□□□□ -0.62
IFT22-208	ENST00000495166	OVOS2	Q6IE36	1432 aa		11.19	□□□□□ -0.62
IFT22-208	ENST00000495166	SPATA31A1	Q5TZJ5	1347 aa		11.19	□□□□□ -0.62
IFT22-208	ENST00000495166	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
IFT22-208	ENST00000495166	TSGA10IP	Q3SY00	556 aa		11.19	□□□□□ -0.62
IFT22-208	ENST00000495166	NYAP1	Q6ZVC0	841 aa		11.19	□□□□□ -0.62
IFT22-208	ENST00000495166	NME9	Q86XW9	330 aa		11.19	□□□□□ -0.62
IFT22-208	ENST00000495166	SEPT12	Q8IYM1	358 aa		11.19	□□□□□ -0.62
IFT22-208	ENST00000495166	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.19	□□□□□ -0.62
IFT22-208	ENST00000495166	EP400	Q96L91	3159 aa		11.18	□□□□□ -0.62
IFT22-208	ENST00000495166	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
IFT22-208	ENST00000495166	BAP1	Q92560	729 aa		11.18	□□□□□ -0.62
IFT22-208	ENST00000495166	COL5A2	P05997	1499 aa	Predicted RBP	11.18	□□□□□ -0.62
IFT22-208	ENST00000495166	HSPA5	P11021	654 aa	Known RBP	11.17	□□□□□ -0.62
IFT22-208	ENST00000495166	SOX11	P35716	441 aa		11.17	□□□□□ -0.62
IFT22-208	ENST00000495166	LINC01559	Q495D7	138 aa		11.17	□□□□□ -0.62
IFT22-208	ENST00000495166	PDXDC2P	Q6P474	469 aa		11.17	□□□□□ -0.62
IFT22-208	ENST00000495166	PBXIP1	Q96AQ6	731 aa		11.17	□□□□□ -0.62
IFT22-208	ENST00000495166	FCF1	Q9Y324	198 aa	Known RBP	11.17	□□□□□ -0.62
IFT22-208	ENST00000495166	ABCC6	O95255	1503 aa		11.17	□□□□□ -0.62
IFT22-208	ENST00000495166	THSD7A	Q9UPZ6	1657 aa		11.17	□□□□□ -0.62
IFT22-208	ENST00000495166	C4orf48	Q5BLP8	95 aa		11.16	□□□□□ -0.62
IFT22-208	ENST00000495166	LARP1	Q6PKG0	1096 aa	Known RBP	11.16	□□□□□ -0.62
IFT22-208	ENST00000495166	PNMA1	Q8ND90	353 aa		11.16	□□□□□ -0.62
IFT22-208	ENST00000495166	ADAM32	Q8TC27	787 aa		11.16	□□□□□ -0.62
IFT22-208	ENST00000495166	FOXJ1	Q92949	421 aa		11.16	□□□□□ -0.62
IFT22-208	ENST00000495166	PODXL2	Q9NZ53	605 aa		11.16	□□□□□ -0.62
IFT22-208	ENST00000495166	CCDC9	Q9Y3X0	531 aa	Known RBP	11.16	□□□□□ -0.62
IFT22-208	ENST00000495166	MYOM1	P52179	1685 aa		11.15	□□□□□ -0.62
IFT22-208	ENST00000495166	FYB1	O15117	783 aa		11.15	□□□□□ -0.62
IFT22-208	ENST00000495166	EVA1C	P58658	441 aa		11.15	□□□□□ -0.62
IFT22-208	ENST00000495166	DEPDC4	Q8N2C3	294 aa		11.15	□□□□□ -0.62
IFT22-208	ENST00000495166	CARD14	Q9BXL6	1004 aa		11.15	□□□□□ -0.62
IFT22-208	ENST00000495166	STRN4	Q9NRL3	753 aa		11.15	□□□□□ -0.62
IFT22-208	ENST00000495166	CEP126	Q9P2H0	1117 aa		11.15	□□□□□ -0.62
IFT22-208	ENST00000495166	THRAP3	Q9Y2W1	955 aa	Known RBP	11.15	□□□□□ -0.62
IFT22-208	ENST00000495166	CRB1	P82279	1406 aa		11.15	□□□□□ -0.62
IFT22-208	ENST00000495166	BRWD3	Q6RI45	1802 aa		11.14	□□□□□ -0.63
IFT22-208	ENST00000495166	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.14	□□□□□ -0.63
IFT22-208	ENST00000495166	ATP9B	O43861	1147 aa		11.14	□□□□□ -0.63
IFT22-208	ENST00000495166	PTK2	Q05397	1052 aa		11.14	□□□□□ -0.63
IFT22-208	ENST00000495166	PLA2G2C	Q5R387	149 aa		11.14	□□□□□ -0.63
IFT22-208	ENST00000495166	SH3BP5L	Q7L8J4	393 aa		11.14	□□□□□ -0.63
IFT22-208	ENST00000495166	KRT27	Q7Z3Y8	459 aa		11.14	□□□□□ -0.63
IFT22-208	ENST00000495166	CCDC125	Q86Z20	511 aa		11.14	□□□□□ -0.63
IFT22-208	ENST00000495166	PHTF2	Q8N3S3	785 aa		11.14	□□□□□ -0.63
IFT22-208	ENST00000495166	TRAIP	Q9BWF2	469 aa		11.14	□□□□□ -0.63
IFT22-208	ENST00000495166	PCDHB9	Q9Y5E1	797 aa		11.14	□□□□□ -0.63
IFT22-208	ENST00000495166	WDR17	Q8IZU2	1322 aa		11.13	□□□□□ -0.63
IFT22-208	ENST00000495166	C11orf95	C9JLR9	678 aa	Predicted RBP	11.13	□□□□□ -0.63
IFT22-208	ENST00000495166	TCP11L2	Q8N4U5	519 aa		11.13	□□□□□ -0.63
IFT22-208	ENST00000495166	COG3	Q96JB2	828 aa		11.12	□□□□□ -0.63
IFT22-208	ENST00000495166	ARHGAP9	Q9BRR9	750 aa		11.12	□□□□□ -0.63
IFT22-208	ENST00000495166	SKI	P12755	728 aa		11.11	□□□□□ -0.63
IFT22-208	ENST00000495166	SH3RF1	Q7Z6J0	888 aa		11.11	□□□□□ -0.63
IFT22-208	ENST00000495166	ARMC2	Q8NEN0	867 aa		11.11	□□□□□ -0.63
IFT22-208	ENST00000495166	IP6K1	Q92551	441 aa		11.11	□□□□□ -0.63
IFT22-208	ENST00000495166	CARD10	Q9BWT7	1032 aa		11.11	□□□□□ -0.63
IFT22-208	ENST00000495166	MAGEB6P1	A0A0J9YX57	407 aa		11.1	□□□□□ -0.63
IFT22-208	ENST00000495166	SPNS2	Q8IVW8	549 aa		11.1	□□□□□ -0.63
IFT22-208	ENST00000495166	GGNBP2	Q9H3C7	697 aa		11.1	□□□□□ -0.63
IFT22-208	ENST00000495166	RGPD5	Q99666	1765 aa		11.1	□□□□□ -0.63
IFT22-208	ENST00000495166	MAP3K19	Q56UN5	1328 aa		11.09	□□□□□ -0.63
IFT22-208	ENST00000495166	DISP2	A7MBM2	1401 aa		11.09	□□□□□ -0.63
IFT22-208	ENST00000495166	BLM	P54132	1417 aa	Predicted RBP	11.09	□□□□□ -0.63
IFT22-208	ENST00000495166	NSD3	Q9BZ95	1437 aa		11.09	□□□□□ -0.63
IFT22-208	ENST00000495166	LTN1	O94822	1766 aa		11.09	□□□□□ -0.63
IFT22-208	ENST00000495166	ZBTB7C	A1YPR0	619 aa		11.09	□□□□□ -0.63
IFT22-208	ENST00000495166	NBPF14	Q5TI25	921 aa		11.09	□□□□□ -0.63
IFT22-208	ENST00000495166	TOM1L2	Q6ZVM7	507 aa		11.09	□□□□□ -0.63
IFT22-208	ENST00000495166	USP35	Q9P2H5	1018 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms