RNA–Protein interactions for RNA: ENST00000494414.1

GPATCH4-207, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-207ENST00000494414 ERVV-1B6SEH8 477 aa10.89□□□□□ -0.67
GPATCH4-207ENST00000494414 ZPR1O75312 459 aa10.89□□□□□ -0.67
GPATCH4-207ENST00000494414 KCNA3P22001 575 aa10.89□□□□□ -0.67
GPATCH4-207ENST00000494414 NEUROD2Q15784 382 aa10.89□□□□□ -0.67
GPATCH4-207ENST00000494414 TBC1D9BQ66K14 1250 aa10.89□□□□□ -0.67
GPATCH4-207ENST00000494414 DZIP3Q86Y13 1208 aaKnown RBP10.89□□□□□ -0.67
GPATCH4-207ENST00000494414 ZFP91Q96JP5 570 aaPredicted RBP10.89□□□□□ -0.67
GPATCH4-207ENST00000494414 TMEM106CQ9BVX2 250 aa10.89□□□□□ -0.67
GPATCH4-207ENST00000494414 SNED1Q8TER0 1413 aa10.89□□□□□ -0.67
GPATCH4-207ENST00000494414 ADCY9O60503 1353 aa10.89□□□□□ -0.67
GPATCH4-207ENST00000494414 STK25O00506 426 aa10.88□□□□□ -0.67
GPATCH4-207ENST00000494414 PIP4K2AP48426 406 aaPredicted RBP10.88□□□□□ -0.67
GPATCH4-207ENST00000494414 TGFB2P61812 414 aa10.88□□□□□ -0.67
GPATCH4-207ENST00000494414 PROSER3Q2NL68 480 aa10.88□□□□□ -0.67
GPATCH4-207ENST00000494414 TIAM2Q8IVF5 1701 aa10.88□□□□□ -0.67
GPATCH4-207ENST00000494414 WDR63Q8IWG1 891 aa10.88□□□□□ -0.67
GPATCH4-207ENST00000494414 DDX21Q9NR30 783 aaKnown RBP eCLIP10.88□□□□□ -0.67
GPATCH4-207ENST00000494414 TBC1D2BQ9UPU7 963 aa10.88□□□□□ -0.67
GPATCH4-207ENST00000494414 LTBP1Q14766 1721 aa10.87□□□□□ -0.67
GPATCH4-207ENST00000494414 SLX4Q8IY92 1834 aa10.87□□□□□ -0.67
GPATCH4-207ENST00000494414 YBX3P16989 372 aaKnown RBP eCLIP10.87□□□□□ -0.67
GPATCH4-207ENST00000494414 TIE1P35590 1138 aa10.87□□□□□ -0.67
GPATCH4-207ENST00000494414 TTLL7Q6ZT98 887 aa10.87□□□□□ -0.67
GPATCH4-207ENST00000494414 PPP4R2Q9NY27 417 aa10.87□□□□□ -0.67
GPATCH4-207ENST00000494414 PARP3Q9Y6F1 533 aa10.87□□□□□ -0.67
GPATCH4-207ENST00000494414 MYH3P11055 1940 aa10.87□□□□□ -0.67
GPATCH4-207ENST00000494414 UBN2Q6ZU65 1347 aa10.86□□□□□ -0.67
GPATCH4-207ENST00000494414 FANCIQ9NVI1 1328 aa10.86□□□□□ -0.67
GPATCH4-207ENST00000494414 KLRG2A4D1S0 409 aaPredicted RBP10.86□□□□□ -0.67
GPATCH4-207ENST00000494414 SERPINB2P05120 415 aa10.86□□□□□ -0.67
GPATCH4-207ENST00000494414 DUSP27Q5VZP5 1158 aa10.86□□□□□ -0.67
GPATCH4-207ENST00000494414 PRR5LQ6MZQ0 368 aa10.86□□□□□ -0.67
GPATCH4-207ENST00000494414 STK24Q9Y6E0 443 aa10.86□□□□□ -0.67
GPATCH4-207ENST00000494414 ABCC12Q96J65 1359 aa10.86□□□□□ -0.67
GPATCH4-207ENST00000494414 CCDC88AQ3V6T2 1871 aa10.85□□□□□ -0.67
GPATCH4-207ENST00000494414 GOLGA2Q08379 1002 aa10.85□□□□□ -0.67
GPATCH4-207ENST00000494414 HLFQ16534 295 aa10.85□□□□□ -0.67
GPATCH4-207ENST00000494414 GIGYF2Q6Y7W6 1299 aaKnown RBP10.85□□□□□ -0.67
GPATCH4-207ENST00000494414 ZNF34Q8IZ26 560 aa10.85□□□□□ -0.67
GPATCH4-207ENST00000494414 C8orf58Q8NAV2 365 aa10.85□□□□□ -0.67
GPATCH4-207ENST00000494414 BMP2KQ9NSY1 1161 aaPredicted RBP10.85□□□□□ -0.67
GPATCH4-207ENST00000494414 ZNF652Q9Y2D9 606 aa10.85□□□□□ -0.67
GPATCH4-207ENST00000494414 RBM19Q9Y4C8 960 aaKnown RBP10.85□□□□□ -0.67
GPATCH4-207ENST00000494414 RNF123Q5XPI4 1314 aa10.84□□□□□ -0.67
GPATCH4-207ENST00000494414 ZBED9Q6R2W3 1325 aa10.84□□□□□ -0.67
GPATCH4-207ENST00000494414 HDGFL1Q5TGJ6 251 aa10.84□□□□□ -0.67
GPATCH4-207ENST00000494414 CHPF2Q9P2E5 772 aa10.84□□□□□ -0.67
GPATCH4-207ENST00000494414 COL4A1P02462 1669 aa10.84□□□□□ -0.67
GPATCH4-207ENST00000494414 A0A1B0GUL6 1792 aa10.84□□□□□ -0.67
GPATCH4-207ENST00000494414 TTLL13PA6NNM8 815 aa10.83□□□□□ -0.68
GPATCH4-207ENST00000494414 NTSR2O95665 410 aa10.83□□□□□ -0.68
GPATCH4-207ENST00000494414 DPEP1P16444 411 aa10.83□□□□□ -0.68
GPATCH4-207ENST00000494414 TRMT2AQ8IZ69 625 aaKnown RBP10.83□□□□□ -0.68
GPATCH4-207ENST00000494414 TSPYL6Q8N831 410 aa10.83□□□□□ -0.68
GPATCH4-207ENST00000494414 TSR2Q969E8 191 aaKnown RBP10.83□□□□□ -0.68
GPATCH4-207ENST00000494414 BRIP1Q9BX63 1249 aa10.83□□□□□ -0.68
GPATCH4-207ENST00000494414 DBF4Q9UBU7 674 aaPredicted RBP10.83□□□□□ -0.68
GPATCH4-207ENST00000494414 PDZRN3Q9UPQ7 1066 aa10.83□□□□□ -0.68
GPATCH4-207ENST00000494414 ANXA1P04083 346 aa10.82□□□□□ -0.68
GPATCH4-207ENST00000494414 MYL6BP14649 208 aa10.82□□□□□ -0.68
GPATCH4-207ENST00000494414 CRY2Q49AN0 593 aa10.82□□□□□ -0.68
GPATCH4-207ENST00000494414 FAM9BQ8IZU0 186 aa10.82□□□□□ -0.68
GPATCH4-207ENST00000494414 KIF6Q6ZMV9 814 aa10.81□□□□□ -0.68
GPATCH4-207ENST00000494414 CNBD1Q8NA66 436 aa10.81□□□□□ -0.68
GPATCH4-207ENST00000494414 XAGE3Q8WTP9 111 aa10.81□□□□□ -0.68
GPATCH4-207ENST00000494414 SETDB2Q96T68 719 aa10.81□□□□□ -0.68
GPATCH4-207ENST00000494414 ISCA1Q9BUE6 129 aa10.81□□□□□ -0.68
GPATCH4-207ENST00000494414 HYPKQ9NX55 129 aa10.81□□□□□ -0.68
GPATCH4-207ENST00000494414 DUOX1Q9NRD9 1551 aa10.81□□□□□ -0.68
GPATCH4-207ENST00000494414 TAF1P21675 1872 aa10.81□□□□□ -0.68
GPATCH4-207ENST00000494414 A0A0G2JLW4 131 aa10.8□□□□□ -0.68
GPATCH4-207ENST00000494414 GRIN3BO60391 1043 aa10.8□□□□□ -0.68
GPATCH4-207ENST00000494414 EIF2S2P20042 333 aaKnown RBP10.8□□□□□ -0.68
GPATCH4-207ENST00000494414 TRIM28Q13263 835 aaKnown RBP10.8□□□□□ -0.68
GPATCH4-207ENST00000494414 PARP10Q53GL7 1025 aa10.8□□□□□ -0.68
GPATCH4-207ENST00000494414 ERICH6Q7L0X2 663 aa10.8□□□□□ -0.68
GPATCH4-207ENST00000494414 COPS6Q7L5N1 327 aa10.8□□□□□ -0.68
GPATCH4-207ENST00000494414 PLBD2Q8NHP8 589 aa10.8□□□□□ -0.68
GPATCH4-207ENST00000494414 ZBTB3Q9H5J0 574 aa10.8□□□□□ -0.68
GPATCH4-207ENST00000494414 NIP7Q9Y221 180 aaKnown RBP eCLIP10.8□□□□□ -0.68
GPATCH4-207ENST00000494414 ZNF330Q9Y3S2 320 aaPredicted RBP10.8□□□□□ -0.68
GPATCH4-207ENST00000494414 LAS1LQ9Y4W2 734 aaKnown RBP10.8□□□□□ -0.68
GPATCH4-207ENST00000494414 ATMINO43313 823 aaPredicted RBP10.79□□□□□ -0.68
GPATCH4-207ENST00000494414 VAMP4O75379 141 aa10.79□□□□□ -0.68
GPATCH4-207ENST00000494414 SRGNP10124 158 aa10.79□□□□□ -0.68
GPATCH4-207ENST00000494414 CHRNA5P30532 468 aa10.79□□□□□ -0.68
GPATCH4-207ENST00000494414 ATN1P54259 1190 aaPredicted RBP10.79□□□□□ -0.68
GPATCH4-207ENST00000494414 TWISTNBQ3B726 338 aaPredicted RBP10.79□□□□□ -0.68
GPATCH4-207ENST00000494414 SLC10A5Q5PT55 438 aa10.79□□□□□ -0.68
GPATCH4-207ENST00000494414 NLRP10Q86W26 655 aa10.79□□□□□ -0.68
GPATCH4-207ENST00000494414 HS6ST3Q8IZP7 471 aa10.79□□□□□ -0.68
GPATCH4-207ENST00000494414 ZNF646O15015 1829 aaPredicted RBP10.79□□□□□ -0.68
GPATCH4-207ENST00000494414 TCIRG1Q13488 830 aa10.78□□□□□ -0.68
GPATCH4-207ENST00000494414 HSP90AB3PQ58FF7 597 aa10.78□□□□□ -0.68
GPATCH4-207ENST00000494414 CCDC30Q5VVM6 783 aa10.78□□□□□ -0.68
GPATCH4-207ENST00000494414 SUSD4Q5VX71 490 aa10.78□□□□□ -0.68
GPATCH4-207ENST00000494414 STYK1Q6J9G0 422 aa10.78□□□□□ -0.68
GPATCH4-207ENST00000494414 BICDL1Q6ZP65 573 aa10.78□□□□□ -0.68
GPATCH4-207ENST00000494414 CHMP4AQ9BY43 222 aa10.78□□□□□ -0.68
GPATCH4-207ENST00000494414 NYXQ9GZU5 481 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms