RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 ZC3H6P61129 1189 aaKnown RBP9.78□□□□□ -0.84
SMC2-205ENST00000493955 ORC1Q13415 861 aa9.78□□□□□ -0.84
SMC2-205ENST00000493955 WDR44Q5JSH3 913 aa9.78□□□□□ -0.84
SMC2-205ENST00000493955 ZNF280CQ8ND82 737 aa9.78□□□□□ -0.84
SMC2-205ENST00000493955 RNF217Q8TC41 542 aa9.78□□□□□ -0.84
SMC2-205ENST00000493955 HSH2DQ96JZ2 352 aa9.78□□□□□ -0.84
SMC2-205ENST00000493955 DMGDHQ9UI17 866 aaKnown RBP9.78□□□□□ -0.84
SMC2-205ENST00000493955 EIF1AYO14602 144 aaKnown RBP9.77□□□□□ -0.85
SMC2-205ENST00000493955 BMP2P12643 396 aa9.77□□□□□ -0.85
SMC2-205ENST00000493955 GNA15P30679 374 aa9.77□□□□□ -0.85
SMC2-205ENST00000493955 POU4F2Q12837 409 aa9.77□□□□□ -0.85
SMC2-205ENST00000493955 LDLRAD1Q5T700 205 aa9.77□□□□□ -0.85
SMC2-205ENST00000493955 KLRG1Q96E93 195 aa9.77□□□□□ -0.85
SMC2-205ENST00000493955 DNAJC25Q9H1X3 360 aa9.77□□□□□ -0.85
SMC2-205ENST00000493955 A6NHS1 94 aa9.76□□□□□ -0.85
SMC2-205ENST00000493955 OPLAHO14841 1288 aa9.76□□□□□ -0.85
SMC2-205ENST00000493955 ARSDP51689 593 aa9.76□□□□□ -0.85
SMC2-205ENST00000493955 HDLBPQ00341 1268 aaKnown RBP9.76□□□□□ -0.85
SMC2-205ENST00000493955 LYSMD3Q7Z3D4 306 aa9.76□□□□□ -0.85
SMC2-205ENST00000493955 PRICKLE2Q7Z3G6 844 aa9.76□□□□□ -0.85
SMC2-205ENST00000493955 TMEM87AQ8NBN3 555 aa9.76□□□□□ -0.85
SMC2-205ENST00000493955 CFHR5Q9BXR6 569 aa9.76□□□□□ -0.85
SMC2-205ENST00000493955 ERCC5P28715 1186 aaPredicted RBP9.75□□□□□ -0.85
SMC2-205ENST00000493955 A0A1B0GTH6 734 aa9.74□□□□□ -0.85
SMC2-205ENST00000493955 CPNE3O75131 537 aaKnown RBP9.74□□□□□ -0.85
SMC2-205ENST00000493955 C6orf118Q5T5N4 469 aa9.74□□□□□ -0.85
SMC2-205ENST00000493955 BTLAQ7Z6A9 289 aa9.74□□□□□ -0.85
SMC2-205ENST00000493955 NEUROD4Q9HD90 331 aa9.74□□□□□ -0.85
SMC2-205ENST00000493955 FNDC3AQ9Y2H6 1198 aaKnown RBP9.74□□□□□ -0.85
SMC2-205ENST00000493955 LOC105371045A0A1W2PR82 267 aa9.73□□□□□ -0.85
SMC2-205ENST00000493955 INPP5BP32019 993 aa9.73□□□□□ -0.85
SMC2-205ENST00000493955 ARSJQ5FYB0 599 aaPredicted RBP9.73□□□□□ -0.85
SMC2-205ENST00000493955 MRPL14Q6P1L8 145 aaKnown RBP9.73□□□□□ -0.85
SMC2-205ENST00000493955 FRMD6Q96NE9 622 aa9.73□□□□□ -0.85
SMC2-205ENST00000493955 METTL5Q9NRN9 209 aaKnown RBP9.73□□□□□ -0.85
SMC2-205ENST00000493955 ZIC5Q96T25 663 aa9.73□□□□□ -0.85
SMC2-205ENST00000493955 TIMMDC1Q9NPL8 285 aa9.73□□□□□ -0.85
SMC2-205ENST00000493955 DACH1Q9UI36 760 aa9.73□□□□□ -0.85
SMC2-205ENST00000493955 RTCBQ9Y3I0 505 aaKnown RBP9.73□□□□□ -0.85
SMC2-205ENST00000493955 TNFRSF21O75509 655 aa9.72□□□□□ -0.85
SMC2-205ENST00000493955 WFS1O76024 890 aa9.72□□□□□ -0.85
SMC2-205ENST00000493955 PDE12Q6L8Q7 609 aaKnown RBP9.72□□□□□ -0.85
SMC2-205ENST00000493955 XKR5Q6UX68 686 aa9.72□□□□□ -0.85
SMC2-205ENST00000493955 LRRC69Q6ZNQ3 347 aa9.72□□□□□ -0.85
SMC2-205ENST00000493955 ZNF438Q7Z4V0 828 aa9.72□□□□□ -0.85
SMC2-205ENST00000493955 SNX29Q8TEQ0 813 aa9.72□□□□□ -0.85
SMC2-205ENST00000493955 SPG7Q9UQ90 795 aa9.72□□□□□ -0.85
SMC2-205ENST00000493955 USP20Q9Y2K6 914 aa9.72□□□□□ -0.85
SMC2-205ENST00000493955 TTLL8A6PVC2 850 aa9.71□□□□□ -0.86
SMC2-205ENST00000493955 EPB42P16452 691 aa9.71□□□□□ -0.86
SMC2-205ENST00000493955 MSX1P28360 303 aa9.71□□□□□ -0.86
SMC2-205ENST00000493955 FANCCQ00597 558 aa9.71□□□□□ -0.86
SMC2-205ENST00000493955 TRIP4Q15650 581 aaPredicted RBP9.71□□□□□ -0.86
SMC2-205ENST00000493955 C9orf131Q5VYM1 1079 aa9.71□□□□□ -0.86
SMC2-205ENST00000493955 CMTR1Q8N1G2 835 aaKnown RBP9.71□□□□□ -0.86
SMC2-205ENST00000493955 SREK1Q8WXA9 508 aaKnown RBP9.71□□□□□ -0.86
SMC2-205ENST00000493955 CRELD1Q96HD1 420 aa9.71□□□□□ -0.86
SMC2-205ENST00000493955 AK5Q9Y6K8 562 aa9.71□□□□□ -0.86
SMC2-205ENST00000493955 UBAP1LF5GYI3 381 aa9.7□□□□□ -0.86
SMC2-205ENST00000493955 RHOQP17081 205 aa9.7□□□□□ -0.86
SMC2-205ENST00000493955 SCARF1Q14162 830 aa9.7□□□□□ -0.86
SMC2-205ENST00000493955 NAALADL2Q58DX5 795 aa9.7□□□□□ -0.86
SMC2-205ENST00000493955 METTL16Q86W50 562 aaKnown RBP9.7□□□□□ -0.86
SMC2-205ENST00000493955 FOXD3Q9UJU5 478 aaPredicted RBP9.7□□□□□ -0.86
SMC2-205ENST00000493955 KCNMB2Q9Y691 235 aa9.7□□□□□ -0.86
SMC2-205ENST00000493955 A0A1W2PNR3 127 aa9.69□□□□□ -0.86
SMC2-205ENST00000493955 ZNF76P36508 570 aa9.69□□□□□ -0.86
SMC2-205ENST00000493955 TYRO3Q06418 890 aa9.69□□□□□ -0.86
SMC2-205ENST00000493955 NT5DC4Q86YG4 428 aa9.69□□□□□ -0.86
SMC2-205ENST00000493955 RNF34Q969K3 372 aa9.69□□□□□ -0.86
SMC2-205ENST00000493955 GMPR2Q9P2T1 348 aaKnown RBP9.69□□□□□ -0.86
SMC2-205ENST00000493955 SHROOM4Q9ULL8 1493 aa9.68□□□□□ -0.86
SMC2-205ENST00000493955 ELP3Q9H9T3 547 aa9.68□□□□□ -0.86
SMC2-205ENST00000493955 GJA3Q9Y6H8 435 aa9.68□□□□□ -0.86
SMC2-205ENST00000493955 C11orf95C9JLR9 678 aaPredicted RBP9.67□□□□□ -0.86
SMC2-205ENST00000493955 EIF4BP23588 611 aaKnown RBP9.67□□□□□ -0.86
SMC2-205ENST00000493955 RAD51AP2Q09MP3 1159 aa9.67□□□□□ -0.86
SMC2-205ENST00000493955 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.67□□□□□ -0.86
SMC2-205ENST00000493955 USPL1Q5W0Q7 1092 aa9.67□□□□□ -0.86
SMC2-205ENST00000493955 CRIPAKQ8N1N5 446 aa9.67□□□□□ -0.86
SMC2-205ENST00000493955 CCDC74AQ96AQ1 378 aa9.67□□□□□ -0.86
SMC2-205ENST00000493955 DRC1Q96MC2 740 aa9.67□□□□□ -0.86
SMC2-205ENST00000493955 CRISPLD1Q9H336 500 aa9.67□□□□□ -0.86
SMC2-205ENST00000493955 STK17AQ9UEE5 414 aa9.67□□□□□ -0.86
SMC2-205ENST00000493955 SOS2Q07890 1332 aaPredicted RBP9.67□□□□□ -0.86
SMC2-205ENST00000493955 PHACTR2O75167 634 aa9.66□□□□□ -0.86
SMC2-205ENST00000493955 CTSHP09668 335 aa9.66□□□□□ -0.86
SMC2-205ENST00000493955 CEP63Q96MT8 703 aa9.66□□□□□ -0.86
SMC2-205ENST00000493955 ZFYVE28Q9HCC9 887 aa9.66□□□□□ -0.86
SMC2-205ENST00000493955 NLRP2Q9NX02 1062 aa9.66□□□□□ -0.86
SMC2-205ENST00000493955 GIPC1O14908 333 aa9.65□□□□□ -0.86
SMC2-205ENST00000493955 AVPP01185 164 aa9.65□□□□□ -0.86
SMC2-205ENST00000493955 BMP1P13497 986 aa9.65□□□□□ -0.86
SMC2-205ENST00000493955 GRNP28799 593 aaKnown RBP9.65□□□□□ -0.86
SMC2-205ENST00000493955 GPAMQ9HCL2 828 aa9.65□□□□□ -0.86
SMC2-205ENST00000493955 TMEM63CQ9P1W3 806 aa9.65□□□□□ -0.86
SMC2-205ENST00000493955 FIGNL2A6NMB9 653 aa9.65□□□□□ -0.87
SMC2-205ENST00000493955 AXIN1O15169 862 aa9.65□□□□□ -0.87
SMC2-205ENST00000493955 XYLBO75191 536 aa9.65□□□□□ -0.87
SMC2-205ENST00000493955 SF3A1Q15459 793 aaKnown RBP9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms