RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 ALKQ9UM73 1620 aa9.16□□□□□ -0.94
TRA2B-216ENST00000493864 USP47Q96K76 1375 aa9.16□□□□□ -0.94
TRA2B-216ENST00000493864 ST20-MTHFSA0A0A6YYL1 179 aa9.16□□□□□ -0.94
TRA2B-216ENST00000493864 LILRA1O75019 489 aa9.16□□□□□ -0.94
TRA2B-216ENST00000493864 CBLBQ13191 982 aa9.16□□□□□ -0.94
TRA2B-216ENST00000493864 PKDCCQ504Y2 493 aa9.16□□□□□ -0.94
TRA2B-216ENST00000493864 PBXIP1Q96AQ6 731 aa9.16□□□□□ -0.94
TRA2B-216ENST00000493864 TRAK1Q9UPV9 953 aa9.16□□□□□ -0.94
TRA2B-216ENST00000493864 TBX22Q9Y458 520 aa9.16□□□□□ -0.94
TRA2B-216ENST00000493864 KIAA1210Q9ULL0 1709 aa9.16□□□□□ -0.94
TRA2B-216ENST00000493864 ADAMTS13Q76LX8 1427 aa9.15□□□□□ -0.94
TRA2B-216ENST00000493864 METP08581 1390 aa9.15□□□□□ -0.94
TRA2B-216ENST00000493864 ADD1P35611 737 aaKnown RBP9.15□□□□□ -0.94
TRA2B-216ENST00000493864 NRXN3Q9Y4C0 1643 aa9.14□□□□□ -0.95
TRA2B-216ENST00000493864 C11orf95C9JLR9 678 aaPredicted RBP9.14□□□□□ -0.95
TRA2B-216ENST00000493864 ATP5J2-PTCD1G3V325 749 aa9.14□□□□□ -0.95
TRA2B-216ENST00000493864 RASA1P20936 1047 aa9.14□□□□□ -0.95
TRA2B-216ENST00000493864 GTF2IP78347 998 aa9.14□□□□□ -0.95
TRA2B-216ENST00000493864 TRIM50Q86XT4 487 aa9.14□□□□□ -0.95
TRA2B-216ENST00000493864 IRX2Q9BZI1 471 aaPredicted RBP9.14□□□□□ -0.95
TRA2B-216ENST00000493864 OSBPL3Q9H4L5 887 aa9.14□□□□□ -0.95
TRA2B-216ENST00000493864 ADGRB1O14514 1584 aa9.14□□□□□ -0.95
TRA2B-216ENST00000493864 SETBP1Q9Y6X0 1596 aa9.14□□□□□ -0.95
TRA2B-216ENST00000493864 ASXL1Q8IXJ9 1541 aa9.14□□□□□ -0.95
TRA2B-216ENST00000493864 CHD2O14647 1828 aaKnown RBP9.13□□□□□ -0.95
TRA2B-216ENST00000493864 CAPN5O15484 640 aaPredicted RBP9.13□□□□□ -0.95
TRA2B-216ENST00000493864 DGAT1O75907 488 aa9.13□□□□□ -0.95
TRA2B-216ENST00000493864 SRPK2P78362 688 aaKnown RBP9.13□□□□□ -0.95
TRA2B-216ENST00000493864 PSME1Q06323 249 aa9.13□□□□□ -0.95
TRA2B-216ENST00000493864 LAPTM4AQ15012 233 aa9.13□□□□□ -0.95
TRA2B-216ENST00000493864 OGFOD1Q8N543 542 aa9.13□□□□□ -0.95
TRA2B-216ENST00000493864 YTHDC2Q9H6S0 1430 aaKnown RBP9.13□□□□□ -0.95
TRA2B-216ENST00000493864 LRPPRCP42704 1394 aaKnown RBP9.12□□□□□ -0.95
TRA2B-216ENST00000493864 CLDN10P78369 228 aa9.12□□□□□ -0.95
TRA2B-216ENST00000493864 LARP1Q6PKG0 1096 aaKnown RBP9.12□□□□□ -0.95
TRA2B-216ENST00000493864 WAPLQ7Z5K2 1190 aa9.12□□□□□ -0.95
TRA2B-216ENST00000493864 TESK2Q96S53 571 aa9.12□□□□□ -0.95
TRA2B-216ENST00000493864 AMOTL2Q9Y2J4 779 aa9.12□□□□□ -0.95
TRA2B-216ENST00000493864 LAMC1P11047 1609 aa9.12□□□□□ -0.95
TRA2B-216ENST00000493864 ABCC11Q96J66 1382 aa9.12□□□□□ -0.95
TRA2B-216ENST00000493864 SETD1AO15047 1707 aaKnown RBP9.11□□□□□ -0.95
TRA2B-216ENST00000493864 CPS1P31327 1500 aa9.11□□□□□ -0.95
TRA2B-216ENST00000493864 AVPP01185 164 aa9.11□□□□□ -0.95
TRA2B-216ENST00000493864 ATP1A2P50993 1020 aa9.11□□□□□ -0.95
TRA2B-216ENST00000493864 SAFB2Q14151 953 aaKnown RBP eCLIP9.11□□□□□ -0.95
TRA2B-216ENST00000493864 CRTC2Q53ET0 693 aaPredicted RBP9.11□□□□□ -0.95
TRA2B-216ENST00000493864 Q6ZVU0 165 aa9.11□□□□□ -0.95
TRA2B-216ENST00000493864 CYP2U1Q7Z449 544 aa9.11□□□□□ -0.95
TRA2B-216ENST00000493864 ZNF594Q96JF6 807 aaPredicted RBP9.11□□□□□ -0.95
TRA2B-216ENST00000493864 AGBL1Q96MI9 1066 aa9.11□□□□□ -0.95
TRA2B-216ENST00000493864 PRAM1Q96QH2 718 aa9.11□□□□□ -0.95
TRA2B-216ENST00000493864 DNAAF2Q9NVR5 837 aaKnown RBP9.11□□□□□ -0.95
TRA2B-216ENST00000493864 POGKQ9P215 609 aa9.11□□□□□ -0.95
TRA2B-216ENST00000493864 PCDHGA11Q9Y5H2 935 aa9.11□□□□□ -0.95
TRA2B-216ENST00000493864 PTPRUQ92729 1446 aa9.11□□□□□ -0.95
TRA2B-216ENST00000493864 CENPJQ9HC77 1338 aaPredicted RBP9.1□□□□□ -0.95
TRA2B-216ENST00000493864 IQSEC2Q5JU85 1478 aa9.1□□□□□ -0.95
TRA2B-216ENST00000493864 USP17L15C9J2P7 530 aa9.1□□□□□ -0.95
TRA2B-216ENST00000493864 USP17L10C9JJH3 530 aa9.1□□□□□ -0.95
TRA2B-216ENST00000493864 USP17L13C9JLJ4 530 aa9.1□□□□□ -0.95
TRA2B-216ENST00000493864 USP17L12C9JPN9 530 aa9.1□□□□□ -0.95
TRA2B-216ENST00000493864 USP17L11C9JVI0 530 aa9.1□□□□□ -0.95
TRA2B-216ENST00000493864 USP17L21D6R901 530 aa9.1□□□□□ -0.95
TRA2B-216ENST00000493864 USP17L18D6R9N7 530 aa9.1□□□□□ -0.95
TRA2B-216ENST00000493864 USP17L22D6RA61 530 aa9.1□□□□□ -0.95
TRA2B-216ENST00000493864 USP17L17D6RBQ6 530 aa9.1□□□□□ -0.95
TRA2B-216ENST00000493864 USP17L19D6RCP7 530 aa9.1□□□□□ -0.95
TRA2B-216ENST00000493864 USP17L20D6RJB6 530 aa9.1□□□□□ -0.95
TRA2B-216ENST00000493864 ADH1AP07327 375 aa9.1□□□□□ -0.95
TRA2B-216ENST00000493864 USP17L24Q0WX57 530 aa9.1□□□□□ -0.95
TRA2B-216ENST00000493864 KIAA1024Q9UPX6 916 aa9.1□□□□□ -0.95
TRA2B-216ENST00000493864 LRRC7Q96NW7 1537 aa9.1□□□□□ -0.95
TRA2B-216ENST00000493864 FAM196BA6NMK8 535 aa9.09□□□□□ -0.95
TRA2B-216ENST00000493864 STAU1O95793 577 aaKnown RBP9.09□□□□□ -0.95
TRA2B-216ENST00000493864 RELBQ01201 579 aa9.09□□□□□ -0.95
TRA2B-216ENST00000493864 NWD1Q149M9 1564 aa9.08□□□□□ -0.96
TRA2B-216ENST00000493864 UBAP1LF5GYI3 381 aa9.08□□□□□ -0.96
TRA2B-216ENST00000493864 ZBTB7BO15156 539 aaPredicted RBP9.08□□□□□ -0.96
TRA2B-216ENST00000493864 ATG7O95352 703 aa9.08□□□□□ -0.96
TRA2B-216ENST00000493864 KCNA6P17658 529 aa9.08□□□□□ -0.96
TRA2B-216ENST00000493864 PTK7Q13308 1070 aa9.08□□□□□ -0.96
TRA2B-216ENST00000493864 CCDC102BQ68D86 513 aa9.08□□□□□ -0.96
TRA2B-216ENST00000493864 LARGE2Q8N3Y3 721 aa9.08□□□□□ -0.96
TRA2B-216ENST00000493864 MEIOBQ8N635 442 aa9.08□□□□□ -0.96
TRA2B-216ENST00000493864 TPCN2Q8NHX9 752 aa9.08□□□□□ -0.96
TRA2B-216ENST00000493864 EIF3AQ14152 1382 aaKnown RBP9.08□□□□□ -0.96
TRA2B-216ENST00000493864 PIK3R4Q99570 1358 aa9.08□□□□□ -0.96
TRA2B-216ENST00000493864 ROBO2Q9HCK4 1378 aa9.08□□□□□ -0.96
TRA2B-216ENST00000493864 PLEKHH1Q9ULM0 1364 aa9.08□□□□□ -0.96
TRA2B-216ENST00000493864 DIP2AQ14689 1571 aa9.07□□□□□ -0.96
TRA2B-216ENST00000493864 WASHC2AQ641Q2 1341 aa9.07□□□□□ -0.96
TRA2B-216ENST00000493864 AXIN1O15169 862 aa9.07□□□□□ -0.96
TRA2B-216ENST00000493864 CTC1Q2NKJ3 1217 aa9.07□□□□□ -0.96
TRA2B-216ENST00000493864 KDF1Q8NAX2 398 aaPredicted RBP9.07□□□□□ -0.96
TRA2B-216ENST00000493864 POLR3GLQ9BT43 218 aa9.07□□□□□ -0.96
TRA2B-216ENST00000493864 ZNF395Q9H8N7 513 aaPredicted RBP9.07□□□□□ -0.96
TRA2B-216ENST00000493864 ARHGEF10LQ9HCE6 1279 aa9.07□□□□□ -0.96
TRA2B-216ENST00000493864 RAB6BQ9NRW1 208 aa9.07□□□□□ -0.96
TRA2B-216ENST00000493864 NOVA2Q9UNW9 492 aaKnown RBP9.07□□□□□ -0.96
TRA2B-216ENST00000493864 RBM19Q9Y4C8 960 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms