RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 JDP2Q8WYK2 163 aa16.33■□□□□ 0.2
SAMM50-205ENST00000493621 RPGRQ92834 1020 aaKnown RBP16.33■□□□□ 0.2
SAMM50-205ENST00000493621 THUMPD2Q9BTF0 503 aaKnown RBP16.33■□□□□ 0.2
SAMM50-205ENST00000493621 ZBTB3Q9H5J0 574 aa16.33■□□□□ 0.2
SAMM50-205ENST00000493621 COL4A5P29400 1685 aa16.33■□□□□ 0.2
SAMM50-205ENST00000493621 CC2D2BQ6DHV5 1058 aa16.32■□□□□ 0.2
SAMM50-205ENST00000493621 UBN2Q6ZU65 1347 aa16.32■□□□□ 0.2
SAMM50-205ENST00000493621 CNTROBQ8N137 903 aa16.32■□□□□ 0.2
SAMM50-205ENST00000493621 GJA3Q9Y6H8 435 aa16.32■□□□□ 0.2
SAMM50-205ENST00000493621 LTBP1Q14766 1721 aa16.31■□□□□ 0.2
SAMM50-205ENST00000493621 RIC1Q4ADV7 1423 aa16.31■□□□□ 0.2
SAMM50-205ENST00000493621 IBTKQ9P2D0 1353 aaPredicted RBP16.31■□□□□ 0.2
SAMM50-205ENST00000493621 EIF6P56537 245 aaKnown RBP16.31■□□□□ 0.2
SAMM50-205ENST00000493621 NFE2L2Q16236 605 aa16.31■□□□□ 0.2
SAMM50-205ENST00000493621 SUSD4Q5VX71 490 aa16.31■□□□□ 0.2
SAMM50-205ENST00000493621 AIDAQ96BJ3 306 aa16.31■□□□□ 0.2
SAMM50-205ENST00000493621 PLEKHF1Q96S99 279 aa16.31■□□□□ 0.2
SAMM50-205ENST00000493621 TCERG1O14776 1098 aaKnown RBP16.3■□□□□ 0.2
SAMM50-205ENST00000493621 HOXA10P31260 410 aaPredicted RBP16.3■□□□□ 0.2
SAMM50-205ENST00000493621 SLC51AQ86UW1 340 aa16.3■□□□□ 0.2
SAMM50-205ENST00000493621 PPEF1O14829 653 aaPredicted RBP16.29■□□□□ 0.2
SAMM50-205ENST00000493621 LMOD1P29536 600 aaPredicted RBP16.29■□□□□ 0.2
SAMM50-205ENST00000493621 CTCFP49711 727 aaPredicted RBP16.29■□□□□ 0.2
SAMM50-205ENST00000493621 ZNF34Q8IZ26 560 aa16.29■□□□□ 0.2
SAMM50-205ENST00000493621 LARGE2Q8N3Y3 721 aa16.29■□□□□ 0.2
SAMM50-205ENST00000493621 RBM17Q96I25 401 aaKnown RBP16.29■□□□□ 0.2
SAMM50-205ENST00000493621 PRDM10Q9NQV6 1147 aa16.29■□□□□ 0.2
SAMM50-205ENST00000493621 MAPK8IP3Q9UPT6 1336 aa16.28■□□□□ 0.2
SAMM50-205ENST00000493621 RASSF10A6NK89 507 aa16.28■□□□□ 0.2
SAMM50-205ENST00000493621 NTSR2O95665 410 aa16.28■□□□□ 0.2
SAMM50-205ENST00000493621 DEFB115Q30KQ5 88 aa16.28■□□□□ 0.2
SAMM50-205ENST00000493621 GRIPAP1Q4V328 841 aa16.28■□□□□ 0.2
SAMM50-205ENST00000493621 GIGYF2Q6Y7W6 1299 aaKnown RBP16.28■□□□□ 0.2
SAMM50-205ENST00000493621 C3orf67Q6ZVT6 689 aa16.28■□□□□ 0.2
SAMM50-205ENST00000493621 CRAMP1Q96RY5 1269 aa16.28■□□□□ 0.2
SAMM50-205ENST00000493621 TRPM7Q96QT4 1865 aa16.28■□□□□ 0.2
SAMM50-205ENST00000493621 PPP1R42Q7Z4L9 355 aa16.27■□□□□ 0.2
SAMM50-205ENST00000493621 WBP1LQ9NX94 342 aa16.27■□□□□ 0.2
SAMM50-205ENST00000493621 ABT1Q9ULW3 272 aaKnown RBP16.27■□□□□ 0.2
SAMM50-205ENST00000493621 LAMB2P55268 1798 aa16.26■□□□□ 0.19
SAMM50-205ENST00000493621 ANKRD36CQ5JPF3 1778 aa16.26■□□□□ 0.19
SAMM50-205ENST00000493621 ERBB4Q15303 1308 aa16.26■□□□□ 0.19
SAMM50-205ENST00000493621 EPS15P42566 896 aa16.26■□□□□ 0.19
SAMM50-205ENST00000493621 SCNN1DP51172 638 aa16.26■□□□□ 0.19
SAMM50-205ENST00000493621 LBX1P52954 281 aa16.26■□□□□ 0.19
SAMM50-205ENST00000493621 PNNQ9H307 717 aaKnown RBP16.26■□□□□ 0.19
SAMM50-205ENST00000493621 DDX21Q9NR30 783 aaKnown RBP eCLIP16.26■□□□□ 0.19
SAMM50-205ENST00000493621 TSPYL4Q9UJ04 414 aa16.26■□□□□ 0.19
SAMM50-205ENST00000493621 WDR33Q9C0J8 1336 aaKnown RBP16.25■□□□□ 0.19
SAMM50-205ENST00000493621 EIF2S2P20042 333 aaKnown RBP16.25■□□□□ 0.19
SAMM50-205ENST00000493621 PARP10Q53GL7 1025 aa16.25■□□□□ 0.19
SAMM50-205ENST00000493621 NIM1KQ8IY84 436 aa16.25■□□□□ 0.19
SAMM50-205ENST00000493621 NLRP3Q96P20 1036 aa16.25■□□□□ 0.19
SAMM50-205ENST00000493621 PPIP5K2O43314 1243 aa16.24■□□□□ 0.19
SAMM50-205ENST00000493621 FMR1Q06787 632 aaKnown RBP eCLIP16.24■□□□□ 0.19
SAMM50-205ENST00000493621 AOC3Q16853 763 aa16.24■□□□□ 0.19
SAMM50-205ENST00000493621 UTP14AQ9BVJ6 771 aaKnown RBP16.24■□□□□ 0.19
SAMM50-205ENST00000493621 TMX4Q9H1E5 349 aaPredicted RBP16.24■□□□□ 0.19
SAMM50-205ENST00000493621 ANXA1P04083 346 aa16.23■□□□□ 0.19
SAMM50-205ENST00000493621 PROSER3Q2NL68 480 aa16.23■□□□□ 0.19
SAMM50-205ENST00000493621 USP50Q70EL3 339 aaPredicted RBP16.23■□□□□ 0.19
SAMM50-205ENST00000493621 LRP10Q7Z4F1 713 aa16.23■□□□□ 0.19
SAMM50-205ENST00000493621 ABCC4O15439 1325 aa16.22■□□□□ 0.19
SAMM50-205ENST00000493621 HSPA8P11142 646 aaKnown RBP16.22■□□□□ 0.19
SAMM50-205ENST00000493621 MAP2K1Q02750 393 aaPredicted RBP16.22■□□□□ 0.19
SAMM50-205ENST00000493621 PDIA6Q15084 440 aa16.22■□□□□ 0.19
SAMM50-205ENST00000493621 PAXIP1Q6ZW49 1069 aaPredicted RBP16.22■□□□□ 0.19
SAMM50-205ENST00000493621 ATP6V0A2Q9Y487 856 aa16.22■□□□□ 0.19
SAMM50-205ENST00000493621 TAF1P21675 1872 aa16.22■□□□□ 0.19
SAMM50-205ENST00000493621 THSD7BQ9C0I4 1608 aa16.21■□□□□ 0.19
SAMM50-205ENST00000493621 TRAF5O00463 557 aa16.21■□□□□ 0.19
SAMM50-205ENST00000493621 RIPK4P57078 832 aa16.21■□□□□ 0.19
SAMM50-205ENST00000493621 GRM1Q13255 1194 aa16.21■□□□□ 0.19
SAMM50-205ENST00000493621 SLC10A5Q5PT55 438 aa16.21■□□□□ 0.19
SAMM50-205ENST00000493621 NECTIN2Q92692 538 aa16.21■□□□□ 0.19
SAMM50-205ENST00000493621 SUPT20HQ8NEM7 779 aa16.2■□□□□ 0.18
SAMM50-205ENST00000493621 CAPNS2Q96L46 248 aa16.2■□□□□ 0.18
SAMM50-205ENST00000493621 VPS33BQ9H267 617 aa16.2■□□□□ 0.18
SAMM50-205ENST00000493621 ADARB2Q9NS39 739 aaKnown RBP16.2■□□□□ 0.18
SAMM50-205ENST00000493621 GPRC5DQ9NZD1 345 aa16.2■□□□□ 0.18
SAMM50-205ENST00000493621 HCLS1P14317 486 aaPredicted RBP16.19■□□□□ 0.18
SAMM50-205ENST00000493621 CXCL9Q07325 125 aa16.19■□□□□ 0.18
SAMM50-205ENST00000493621 AIMP1Q12904 312 aaKnown RBP16.19■□□□□ 0.18
SAMM50-205ENST00000493621 CST9Q5W186 159 aa16.19■□□□□ 0.18
SAMM50-205ENST00000493621 CYP4F22Q6NT55 531 aa16.19■□□□□ 0.18
SAMM50-205ENST00000493621 DPP8Q6V1X1 898 aaPredicted RBP16.19■□□□□ 0.18
SAMM50-205ENST00000493621 COPS6Q7L5N1 327 aa16.19■□□□□ 0.18
SAMM50-205ENST00000493621 ZNRF3Q9ULT6 936 aa16.19■□□□□ 0.18
SAMM50-205ENST00000493621 ECE1P42892 770 aa16.18■□□□□ 0.18
SAMM50-205ENST00000493621 GMPSP49915 693 aaPredicted RBP16.18■□□□□ 0.18
SAMM50-205ENST00000493621 HSP90AB3PQ58FF7 597 aa16.18■□□□□ 0.18
SAMM50-205ENST00000493621 NLRP10Q86W26 655 aa16.18■□□□□ 0.18
SAMM50-205ENST00000493621 XAGE3Q8WTP9 111 aa16.18■□□□□ 0.18
SAMM50-205ENST00000493621 RTFDC1Q9BY42 306 aaPredicted RBP16.18■□□□□ 0.18
SAMM50-205ENST00000493621 BBOX1O75936 387 aa16.17■□□□□ 0.18
SAMM50-205ENST00000493621 TMPOP42166 694 aaKnown RBP16.17■□□□□ 0.18
SAMM50-205ENST00000493621 SP8Q8IXZ3 490 aa16.17■□□□□ 0.18
SAMM50-205ENST00000493621 MPNDQ8N594 471 aa16.17■□□□□ 0.18
SAMM50-205ENST00000493621 GPR101Q96P66 508 aaPredicted RBP16.17■□□□□ 0.18
SAMM50-205ENST00000493621 BABAM1Q9NWV8 329 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms