RNA–Protein interactions for RNA: ENST00000493537.5

SUPT20H-221, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 2,149 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-221ENST00000493537 DPYSL4O14531 572 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 CDC45O75419 566 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 NDUFV2P19404 249 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 ITGAEP38570 1179 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 PPM1FP49593 454 aaPredicted RBP5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 ZBED6P86452 979 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 PDE3BQ13370 1112 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 MORC3Q14149 939 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 ARSHQ5FYA8 562 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 SPECC1Q5M775 1068 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 NFXL1Q6ZNB6 911 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 IQCF2Q8IXL9 164 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 CPXCR1Q8N123 301 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 MYO1HQ8N1T3 1032 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 SKA1Q96BD8 255 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 CENPTQ96BT3 561 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 TMEM87BQ96K49 555 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 GPR101Q96P66 508 aaPredicted RBP5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 MAP3K14Q99558 947 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 SELENOOQ9BVL4 669 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 C12orf49Q9H741 205 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 SLAIN2Q9P270 581 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 CTAGE5O15320 804 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 TPPPO94811 219 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 ATF3P18847 181 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 PAX7P23759 505 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 EPHB1P54762 984 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 GPSM2P81274 684 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 DNAJC21Q5F1R6 531 aaKnown RBP5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 RC3H1Q5TC82 1133 aaKnown RBP5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 C11orf74Q86VG3 221 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 CKAP2LQ8IYA6 745 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 JARID2Q92833 1246 aaPredicted RBP5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 ZNF594Q96JF6 807 aaPredicted RBP5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 SERINC2Q96SA4 455 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 XPO4Q9C0E2 1151 aaKnown RBP5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 RIC8AQ9NPQ8 531 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 UTP6Q9NYH9 597 aaKnown RBP5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 STK26Q9P289 416 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 HTATSF1O43719 755 aaKnown RBP5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 PYGBP11216 843 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 CHMP4BP1P59074 171 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 NUCB1Q02818 461 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 BRDTQ58F21 947 aaPredicted RBP5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 TSHZ3Q63HK5 1081 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 KSR2Q6VAB6 950 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 TBC1D9Q6ZT07 1266 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 DAAM2Q86T65 1068 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 PGBD3Q8N328 593 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 MIGA1Q8NAN2 632 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 VMP1Q96GC9 406 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 PDCL3Q9H2J4 239 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 DHX36Q9H2U1 1008 aaKnown RBP5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 COMMD8Q9NX08 183 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 CGNQ9P2M7 1197 aaKnown RBP5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 MKL2Q9ULH7 1088 aa5.38□□□□□ -1.55
SUPT20H-221ENST00000493537 FAM170AA1A519 330 aa5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 H3BRB1 525 aa5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 ALDH1L1O75891 902 aa5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 IPO7O95373 1038 aaKnown RBP5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 OAS2P29728 719 aaKnown RBP5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 HOXC13P31276 330 aa5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 NFX1Q12986 1120 aaKnown RBP5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 DDB1Q16531 1140 aa5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 ZNF394Q53GI3 561 aa5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 MFSD4BQ5TF39 518 aa5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 ALKBH2Q6NS38 261 aa5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 SAMD14Q8IZD0 417 aaPredicted RBP5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 PRR7Q8TB68 274 aa5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 CLP1Q92989 425 aaKnown RBP5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 TBC1D31Q96DN5 1066 aa5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 TUT1Q9H6E5 874 aaKnown RBP5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 EGFL7Q9UHF1 273 aa5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 TAGLN3Q9UI15 199 aa5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 RABL2BQ9UNT1 228 aa5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 CEP83Q9Y592 693 aa5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 UNC13AQ9UPW8 1703 aa5.37□□□□□ -1.55
SUPT20H-221ENST00000493537 ATP9BO43861 1147 aa5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 LILRB3O75022 631 aa5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 TRIM37O94972 964 aa5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 ABL1P00519 1130 aa5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 FGRP09769 529 aa5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 HCLS1P14317 486 aaPredicted RBP5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 ATP2B4P23634 1241 aa5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 ABCD1P33897 745 aa5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 SERINC3Q13530 473 aa5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 WDR45BQ5MNZ6 344 aa5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 JAKMIP3Q5VZ66 844 aa5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 CPLX2Q6PUV4 134 aaKnown RBP5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 WAPLQ7Z5K2 1190 aa5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 MNS1Q8NEH6 495 aa5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 SRPK1Q96SB4 655 aaKnown RBP5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.36□□□□□ -1.557e-6■■■■□ 21.2
SUPT20H-221ENST00000493537 NGRNQ9NPE2 291 aaKnown RBP5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 FANCLQ9NW38 375 aa5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 LUZP4Q9P127 313 aa5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 USP25Q9UHP3 1055 aa5.36□□□□□ -1.55
SUPT20H-221ENST00000493537 XPO7Q9UIA9 1087 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms