RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 TRIM35Q9UPQ4 493 aa17.43■□□□□ 0.38
SNED1-212ENST00000493358 RNF123Q5XPI4 1314 aa17.43■□□□□ 0.38
SNED1-212ENST00000493358 IQCA1LA6NCM1 817 aa17.42■□□□□ 0.38
SNED1-212ENST00000493358 NTSR2O95665 410 aa17.42■□□□□ 0.38
SNED1-212ENST00000493358 HOXB7P09629 217 aa17.42■□□□□ 0.38
SNED1-212ENST00000493358 CALD1Q05682 793 aaKnown RBP17.42■□□□□ 0.38
SNED1-212ENST00000493358 PROSER3Q2NL68 480 aa17.42■□□□□ 0.38
SNED1-212ENST00000493358 GRIPAP1Q4V328 841 aa17.42■□□□□ 0.38
SNED1-212ENST00000493358 HDGFL1Q5TGJ6 251 aa17.42■□□□□ 0.38
SNED1-212ENST00000493358 XAGE3Q8WTP9 111 aa17.42■□□□□ 0.38
SNED1-212ENST00000493358 NLRP3Q96P20 1036 aa17.42■□□□□ 0.38
SNED1-212ENST00000493358 DDX21Q9NR30 783 aaKnown RBP eCLIP17.42■□□□□ 0.38
SNED1-212ENST00000493358 ZNF277Q9NRM2 450 aaPredicted RBP17.42■□□□□ 0.38
SNED1-212ENST00000493358 IARSP41252 1262 aaKnown RBP17.41■□□□□ 0.38
SNED1-212ENST00000493358 COPS6Q7L5N1 327 aa17.41■□□□□ 0.38
SNED1-212ENST00000493358 TAF1P21675 1872 aa17.4■□□□□ 0.38
SNED1-212ENST00000493358 DDNO94850 711 aaPredicted RBP17.4■□□□□ 0.38
SNED1-212ENST00000493358 HOXA10P31260 410 aaPredicted RBP17.4■□□□□ 0.38
SNED1-212ENST00000493358 ZEB1P37275 1124 aaPredicted RBP17.4■□□□□ 0.38
SNED1-212ENST00000493358 OLFM4Q6UX06 510 aa17.4■□□□□ 0.38
SNED1-212ENST00000493358 LRP10Q7Z4F1 713 aa17.4■□□□□ 0.38
SNED1-212ENST00000493358 JDP2Q8WYK2 163 aa17.4■□□□□ 0.38
SNED1-212ENST00000493358 CFAP44Q96MT7 982 aa17.4■□□□□ 0.38
SNED1-212ENST00000493358 CRAMP1Q96RY5 1269 aa17.4■□□□□ 0.38
SNED1-212ENST00000493358 DDX60Q8IY21 1712 aaKnown RBP17.4■□□□□ 0.38
SNED1-212ENST00000493358 PPEF1O14829 653 aaPredicted RBP17.39■□□□□ 0.37
SNED1-212ENST00000493358 SYNE4Q8N205 404 aa17.39■□□□□ 0.37
SNED1-212ENST00000493358 PSMD1Q99460 953 aa17.39■□□□□ 0.37
SNED1-212ENST00000493358 CHPF2Q9P2E5 772 aa17.39■□□□□ 0.37
SNED1-212ENST00000493358 DBF4Q9UBU7 674 aaPredicted RBP17.39■□□□□ 0.37
SNED1-212ENST00000493358 KRT24Q2M2I5 525 aa17.38■□□□□ 0.37
SNED1-212ENST00000493358 KLRG1Q96E93 195 aa17.38■□□□□ 0.37
SNED1-212ENST00000493358 POTECB2RU33 542 aa17.37■□□□□ 0.37
SNED1-212ENST00000493358 APAF1O14727 1248 aa17.37■□□□□ 0.37
SNED1-212ENST00000493358 GNAI1P63096 354 aa17.37■□□□□ 0.37
SNED1-212ENST00000493358 TCIRG1Q13488 830 aa17.37■□□□□ 0.37
SNED1-212ENST00000493358 CHADLQ6NUI6 762 aa17.37■□□□□ 0.37
SNED1-212ENST00000493358 L3MBTL3Q96JM7 780 aaPredicted RBP17.37■□□□□ 0.37
SNED1-212ENST00000493358 TRMT112Q9UI30 125 aaKnown RBP17.37■□□□□ 0.37
SNED1-212ENST00000493358 SH3TC1Q8TE82 1336 aa17.37■□□□□ 0.37
SNED1-212ENST00000493358 CACNA1FO60840 1977 aa17.37■□□□□ 0.37
SNED1-212ENST00000493358 TCERG1O14776 1098 aaKnown RBP17.36■□□□□ 0.37
SNED1-212ENST00000493358 EIF6P56537 245 aaKnown RBP17.36■□□□□ 0.37
SNED1-212ENST00000493358 HTRA3P83110 453 aa17.36■□□□□ 0.37
SNED1-212ENST00000493358 SLC10A5Q5PT55 438 aa17.36■□□□□ 0.37
SNED1-212ENST00000493358 DUSP27Q5VZP5 1158 aa17.36■□□□□ 0.37
SNED1-212ENST00000493358 NLRP10Q86W26 655 aa17.36■□□□□ 0.37
SNED1-212ENST00000493358 DNAJC5GQ8N7S2 189 aa17.36■□□□□ 0.37
SNED1-212ENST00000493358 MBIPQ9NS73 344 aa17.36■□□□□ 0.37
SNED1-212ENST00000493358 IFT57Q9NWB7 429 aa17.36■□□□□ 0.37
SNED1-212ENST00000493358 HYPKQ9NX55 129 aa17.36■□□□□ 0.37
SNED1-212ENST00000493358 ZNF541Q9H0D2 1346 aa17.36■□□□□ 0.37
SNED1-212ENST00000493358 LARGE2Q8N3Y3 721 aa17.35■□□□□ 0.37
SNED1-212ENST00000493358 PLBD2Q8NHP8 589 aa17.35■□□□□ 0.37
SNED1-212ENST00000493358 CHMP4AQ9BY43 222 aa17.35■□□□□ 0.37
SNED1-212ENST00000493358 HACL1Q9UJ83 578 aa17.35■□□□□ 0.37
SNED1-212ENST00000493358 SNED1Q8TER0 1413 aa17.35■□□□□ 0.37
SNED1-212ENST00000493358 MYH3P11055 1940 aa17.35■□□□□ 0.37
SNED1-212ENST00000493358 ANKRD13DQ6ZTN6 518 aa17.34■□□□□ 0.37
SNED1-212ENST00000493358 DDX46Q7L014 1031 aaKnown RBP17.34■□□□□ 0.37
SNED1-212ENST00000493358 LDHDQ86WU2 507 aa17.34■□□□□ 0.37
SNED1-212ENST00000493358 SUPT20HQ8NEM7 779 aa17.34■□□□□ 0.37
SNED1-212ENST00000493358 LRRC37AA6NMS7 1700 aa17.33■□□□□ 0.37
SNED1-212ENST00000493358 ABCC4O15439 1325 aa17.33■□□□□ 0.36
SNED1-212ENST00000493358 FZD9O00144 591 aa17.33■□□□□ 0.36
SNED1-212ENST00000493358 HCLS1P14317 486 aaPredicted RBP17.33■□□□□ 0.36
SNED1-212ENST00000493358 LMOD1P29536 600 aaPredicted RBP17.33■□□□□ 0.36
SNED1-212ENST00000493358 GOLGA2Q08379 1002 aa17.33■□□□□ 0.36
SNED1-212ENST00000493358 EAPPQ56P03 285 aaPredicted RBP17.33■□□□□ 0.36
SNED1-212ENST00000493358 C3orf67Q6ZVT6 689 aa17.33■□□□□ 0.36
SNED1-212ENST00000493358 NIM1KQ8IY84 436 aa17.33■□□□□ 0.36
SNED1-212ENST00000493358 GPC2Q8N158 579 aa17.33■□□□□ 0.36
SNED1-212ENST00000493358 TAF1DQ9H5J8 278 aaPredicted RBP17.33■□□□□ 0.36
SNED1-212ENST00000493358 BBOX1O75936 387 aa17.32■□□□□ 0.36
SNED1-212ENST00000493358 PNMA8AQ86V59 439 aaPredicted RBP17.32■□□□□ 0.36
SNED1-212ENST00000493358 CLEC11AQ9Y240 323 aa17.32■□□□□ 0.36
SNED1-212ENST00000493358 ATP6V0A2Q9Y487 856 aa17.32■□□□□ 0.36
SNED1-212ENST00000493358 GJA3Q9Y6H8 435 aa17.32■□□□□ 0.36
SNED1-212ENST00000493358 TRPM7Q96QT4 1865 aa17.32■□□□□ 0.36
SNED1-212ENST00000493358 ADAMTSL1Q8N6G6 1762 aa17.32■□□□□ 0.36
SNED1-212ENST00000493358 PPIP5K2O43314 1243 aa17.31■□□□□ 0.36
SNED1-212ENST00000493358 RIC3Q7Z5B4 369 aa17.31■□□□□ 0.36
SNED1-212ENST00000493358 ZNF853P0CG23 659 aa17.3■□□□□ 0.36
SNED1-212ENST00000493358 HSP90B1P14625 803 aaKnown RBP17.3■□□□□ 0.36
SNED1-212ENST00000493358 EPHX2P34913 555 aa17.3■□□□□ 0.36
SNED1-212ENST00000493358 DPP8Q6V1X1 898 aaPredicted RBP17.3■□□□□ 0.36
SNED1-212ENST00000493358 TMC4Q7Z404 712 aa17.3■□□□□ 0.36
SNED1-212ENST00000493358 VPS33BQ9H267 617 aa17.3■□□□□ 0.36
SNED1-212ENST00000493358 COL4A5P29400 1685 aa17.29■□□□□ 0.36
SNED1-212ENST00000493358 POTEIP0CG38 1075 aa17.29■□□□□ 0.36
SNED1-212ENST00000493358 POTEJP0CG39 1038 aa17.29■□□□□ 0.36
SNED1-212ENST00000493358 GRAPQ13588 217 aa17.29■□□□□ 0.36
SNED1-212ENST00000493358 JMYQ8N9B5 988 aa17.29■□□□□ 0.36
SNED1-212ENST00000493358 GRAPLQ8TC17 118 aaPredicted RBP17.29■□□□□ 0.36
SNED1-212ENST00000493358 ATP5J2-PTCD1G3V325 749 aa17.28■□□□□ 0.36
SNED1-212ENST00000493358 ELL2O00472 640 aaPredicted RBP17.28■□□□□ 0.36
SNED1-212ENST00000493358 DDX58O95786 925 aaKnown RBP17.28■□□□□ 0.36
SNED1-212ENST00000493358 SP8Q8IXZ3 490 aa17.28■□□□□ 0.36
SNED1-212ENST00000493358 MPNDQ8N594 471 aa17.28■□□□□ 0.36
SNED1-212ENST00000493358 ISCA1Q9BUE6 129 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms