RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 SNED1Q8TER0 1413 aa29.69■■■□□ 2.34
HMG20B-214ENST00000493191 RNF123Q5XPI4 1314 aa29.69■■■□□ 2.34
HMG20B-214ENST00000493191 HOXA10P31260 410 aaPredicted RBP29.68■■■□□ 2.34
HMG20B-214ENST00000493191 JDP2Q8WYK2 163 aa29.68■■■□□ 2.34
HMG20B-214ENST00000493191 IBTKQ9P2D0 1353 aaPredicted RBP29.67■■■□□ 2.34
HMG20B-214ENST00000493191 ITGBL1O95965 494 aaPredicted RBP29.67■■■□□ 2.34
HMG20B-214ENST00000493191 CC2D2BQ6DHV5 1058 aa29.67■■■□□ 2.34
HMG20B-214ENST00000493191 GIGYF2Q6Y7W6 1299 aaKnown RBP29.67■■■□□ 2.34
HMG20B-214ENST00000493191 TCERG1O14776 1098 aaKnown RBP29.66■■■□□ 2.34
HMG20B-214ENST00000493191 EIF2S2P20042 333 aaKnown RBP29.66■■■□□ 2.34
HMG20B-214ENST00000493191 GPC2Q8N158 579 aa29.66■■■□□ 2.34
HMG20B-214ENST00000493191 RBM17Q96I25 401 aaKnown RBP29.66■■■□□ 2.34
HMG20B-214ENST00000493191 ERBB4Q15303 1308 aa29.66■■■□□ 2.34
HMG20B-214ENST00000493191 NTSR2O95665 410 aa29.65■■■□□ 2.34
HMG20B-214ENST00000493191 RIPK4P57078 832 aa29.65■■■□□ 2.34
HMG20B-214ENST00000493191 C3orf67Q6ZVT6 689 aa29.65■■■□□ 2.34
HMG20B-214ENST00000493191 SLC51AQ86UW1 340 aa29.65■■■□□ 2.34
HMG20B-214ENST00000493191 CNTNAP1P78357 1384 aa29.64■■■□□ 2.34
HMG20B-214ENST00000493191 RIC1Q4ADV7 1423 aa29.64■■■□□ 2.34
HMG20B-214ENST00000493191 PNMA8AQ86V59 439 aaPredicted RBP29.64■■■□□ 2.34
HMG20B-214ENST00000493191 TMEM88BA6NKF7 163 aa29.63■■■□□ 2.33
HMG20B-214ENST00000493191 PDIA6Q15084 440 aa29.63■■■□□ 2.33
HMG20B-214ENST00000493191 PPP1R42Q7Z4L9 355 aa29.63■■■□□ 2.33
HMG20B-214ENST00000493191 CRAMP1Q96RY5 1269 aa29.63■■■□□ 2.33
HMG20B-214ENST00000493191 GJA3Q9Y6H8 435 aa29.63■■■□□ 2.33
HMG20B-214ENST00000493191 COL4A5P29400 1685 aa29.63■■■□□ 2.33
HMG20B-214ENST00000493191 PPEF1O14829 653 aaPredicted RBP29.62■■■□□ 2.33
HMG20B-214ENST00000493191 ANXA1P04083 346 aa29.62■■■□□ 2.33
HMG20B-214ENST00000493191 EIF6P56537 245 aaKnown RBP29.62■■■□□ 2.33
HMG20B-214ENST00000493191 PROSER3Q2NL68 480 aa29.62■■■□□ 2.33
HMG20B-214ENST00000493191 MAP1SQ66K74 1059 aaPredicted RBP29.62■■■□□ 2.33
HMG20B-214ENST00000493191 LRP10Q7Z4F1 713 aa29.62■■■□□ 2.33
HMG20B-214ENST00000493191 ADAMTSL1Q8N6G6 1762 aa29.62■■■□□ 2.33
HMG20B-214ENST00000493191 CNTROBQ8N137 903 aa29.61■■■□□ 2.33
HMG20B-214ENST00000493191 GRIPAP1Q4V328 841 aa29.6■■■□□ 2.33
HMG20B-214ENST00000493191 PARP10Q53GL7 1025 aa29.6■■■□□ 2.33
HMG20B-214ENST00000493191 LARGE2Q8N3Y3 721 aa29.6■■■□□ 2.33
HMG20B-214ENST00000493191 VEGFBP49765 207 aa29.59■■■□□ 2.33
HMG20B-214ENST00000493191 NLRP3Q96P20 1036 aa29.59■■■□□ 2.33
HMG20B-214ENST00000493191 UTP14AQ9BVJ6 771 aaKnown RBP29.59■■■□□ 2.33
HMG20B-214ENST00000493191 TMPOP42166 694 aaKnown RBP29.58■■■□□ 2.33
HMG20B-214ENST00000493191 NECTIN2Q92692 538 aa29.58■■■□□ 2.33
HMG20B-214ENST00000493191 LMOD1P29536 600 aaPredicted RBP29.56■■■□□ 2.32
HMG20B-214ENST00000493191 RALBP1Q15311 655 aa29.56■■■□□ 2.32
HMG20B-214ENST00000493191 BABAM1Q9NWV8 329 aa29.56■■■□□ 2.32
HMG20B-214ENST00000493191 FOXN1O15353 648 aa29.55■■■□□ 2.32
HMG20B-214ENST00000493191 SLC10A5Q5PT55 438 aa29.55■■■□□ 2.32
HMG20B-214ENST00000493191 LTBP1Q14766 1721 aa29.54■■■□□ 2.32
HMG20B-214ENST00000493191 EPS15P42566 896 aa29.54■■■□□ 2.32
HMG20B-214ENST00000493191 SCNN1DP51172 638 aa29.54■■■□□ 2.32
HMG20B-214ENST00000493191 LMOD3Q0VAK6 560 aa29.54■■■□□ 2.32
HMG20B-214ENST00000493191 AIMP1Q12904 312 aaKnown RBP29.54■■■□□ 2.32
HMG20B-214ENST00000493191 COPS6Q7L5N1 327 aa29.54■■■□□ 2.32
HMG20B-214ENST00000493191 TMX4Q9H1E5 349 aaPredicted RBP29.54■■■□□ 2.32
HMG20B-214ENST00000493191 PPIP5K2O43314 1243 aa29.53■■■□□ 2.32
HMG20B-214ENST00000493191 NEUROD2Q15784 382 aa29.53■■■□□ 2.32
HMG20B-214ENST00000493191 NIM1KQ8IY84 436 aa29.53■■■□□ 2.32
HMG20B-214ENST00000493191 ATP6V0A2Q9Y487 856 aa29.53■■■□□ 2.32
HMG20B-214ENST00000493191 CCDC146Q8IYE0 955 aa29.52■■■□□ 2.32
HMG20B-214ENST00000493191 XAGE3Q8WTP9 111 aa29.52■■■□□ 2.32
HMG20B-214ENST00000493191 ABCC4O15439 1325 aa29.51■■■□□ 2.32
HMG20B-214ENST00000493191 AOC3Q16853 763 aa29.51■■■□□ 2.31
HMG20B-214ENST00000493191 HCLS1P14317 486 aaPredicted RBP29.5■■■□□ 2.31
HMG20B-214ENST00000493191 KRT24Q2M2I5 525 aa29.5■■■□□ 2.31
HMG20B-214ENST00000493191 DEFB115Q30KQ5 88 aa29.5■■■□□ 2.31
HMG20B-214ENST00000493191 NLRP10Q86W26 655 aa29.5■■■□□ 2.31
HMG20B-214ENST00000493191 RASSF10A6NK89 507 aa29.49■■■□□ 2.31
HMG20B-214ENST00000493191 HSP90AB3PQ58FF7 597 aa29.49■■■□□ 2.31
HMG20B-214ENST00000493191 AIDAQ96BJ3 306 aa29.49■■■□□ 2.31
HMG20B-214ENST00000493191 DDX21Q9NR30 783 aaKnown RBP eCLIP29.49■■■□□ 2.31
HMG20B-214ENST00000493191 ABT1Q9ULW3 272 aaKnown RBP29.49■■■□□ 2.31
HMG20B-214ENST00000493191 FMR1Q06787 632 aaKnown RBP eCLIP29.48■■■□□ 2.31
HMG20B-214ENST00000493191 LAS1LQ9Y4W2 734 aaKnown RBP29.48■■■□□ 2.31
HMG20B-214ENST00000493191 ANKRD36CQ5JPF3 1778 aa29.48■■■□□ 2.31
HMG20B-214ENST00000493191 LAMB2P55268 1798 aa29.47■■■□□ 2.31
HMG20B-214ENST00000493191 TCIRG1Q13488 830 aa29.47■■■□□ 2.31
HMG20B-214ENST00000493191 ZNF428Q96B54 188 aa29.47■■■□□ 2.31
HMG20B-214ENST00000493191 TRMT112Q9UI30 125 aaKnown RBP29.47■■■□□ 2.31
HMG20B-214ENST00000493191 CHL1O00533 1208 aa29.46■■■□□ 2.31
HMG20B-214ENST00000493191 BBOX1O75936 387 aa29.46■■■□□ 2.31
HMG20B-214ENST00000493191 CTCFP49711 727 aaPredicted RBP29.46■■■□□ 2.31
HMG20B-214ENST00000493191 USP50Q70EL3 339 aaPredicted RBP29.46■■■□□ 2.31
HMG20B-214ENST00000493191 VPS33BQ9H267 617 aa29.46■■■□□ 2.31
HMG20B-214ENST00000493191 WBP1LQ9NX94 342 aa29.46■■■□□ 2.31
HMG20B-214ENST00000493191 DDX10Q13206 875 aaKnown RBP29.45■■■□□ 2.31
HMG20B-214ENST00000493191 DPP8Q6V1X1 898 aaPredicted RBP29.45■■■□□ 2.31
HMG20B-214ENST00000493191 SUPT20HQ8NEM7 779 aa29.45■■■□□ 2.31
HMG20B-214ENST00000493191 CXCL9Q07325 125 aa29.44■■■□□ 2.3
HMG20B-214ENST00000493191 SP8Q8IXZ3 490 aa29.44■■■□□ 2.3
HMG20B-214ENST00000493191 RTFDC1Q9BY42 306 aaPredicted RBP29.44■■■□□ 2.3
HMG20B-214ENST00000493191 PRDM10Q9NQV6 1147 aa29.44■■■□□ 2.3
HMG20B-214ENST00000493191 ZNRF3Q9ULT6 936 aa29.44■■■□□ 2.3
HMG20B-214ENST00000493191 MYBBP1AQ9BQG0 1328 aaKnown RBP29.44■■■□□ 2.3
HMG20B-214ENST00000493191 WDR33Q9C0J8 1336 aaKnown RBP29.44■■■□□ 2.3
HMG20B-214ENST00000493191 DDX46Q7L014 1031 aaKnown RBP29.43■■■□□ 2.3
HMG20B-214ENST00000493191 MPNDQ8N594 471 aa29.43■■■□□ 2.3
HMG20B-214ENST00000493191 GPRC5DQ9NZD1 345 aa29.43■■■□□ 2.3
HMG20B-214ENST00000493191 CHPF2Q9P2E5 772 aa29.43■■■□□ 2.3
HMG20B-214ENST00000493191 TRIM35Q9UPQ4 493 aa29.43■■■□□ 2.3
HMG20B-214ENST00000493191 SH3TC1Q8TE82 1336 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms