RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 SMC1BQ8NDV3 1235 aa24.14■■□□□ 1.45
CHD1L-209ENST00000492728 AIMP1Q12904 312 aaKnown RBP24.13■■□□□ 1.45
CHD1L-209ENST00000492728 CHPF2Q9P2E5 772 aa24.13■■□□□ 1.45
CHD1L-209ENST00000492728 COL4A5P29400 1685 aa24.13■■□□□ 1.45
CHD1L-209ENST00000492728 ZNF541Q9H0D2 1346 aa24.12■■□□□ 1.45
CHD1L-209ENST00000492728 ALDH1B1P30837 517 aa24.12■■□□□ 1.45
CHD1L-209ENST00000492728 HOXA10P31260 410 aaPredicted RBP24.12■■□□□ 1.45
CHD1L-209ENST00000492728 DPY19L2Q6NUT2 758 aa24.12■■□□□ 1.45
CHD1L-209ENST00000492728 DDX21Q9NR30 783 aaKnown RBP eCLIP24.12■■□□□ 1.45
CHD1L-209ENST00000492728 CCDC184Q52MB2 194 aa24.11■■□□□ 1.45
CHD1L-209ENST00000492728 PARP10Q53GL7 1025 aa24.11■■□□□ 1.45
CHD1L-209ENST00000492728 APAF1O14727 1248 aa24.1■■□□□ 1.45
CHD1L-209ENST00000492728 RTKN2Q8IZC4 609 aa24.1■■□□□ 1.45
CHD1L-209ENST00000492728 MBIPQ9NS73 344 aa24.1■■□□□ 1.45
CHD1L-209ENST00000492728 ZNF853P0CG23 659 aa24.09■■□□□ 1.45
CHD1L-209ENST00000492728 POTEIP0CG38 1075 aa24.09■■□□□ 1.45
CHD1L-209ENST00000492728 POTEJP0CG39 1038 aa24.09■■□□□ 1.45
CHD1L-209ENST00000492728 PPP1R42Q7Z4L9 355 aa24.09■■□□□ 1.45
CHD1L-209ENST00000492728 NLRP10Q86W26 655 aa24.09■■□□□ 1.45
CHD1L-209ENST00000492728 SYNE4Q8N205 404 aa24.09■■□□□ 1.45
CHD1L-209ENST00000492728 RPGRQ92834 1020 aaKnown RBP24.09■■□□□ 1.45
CHD1L-209ENST00000492728 CFAP44Q96MT7 982 aa24.09■■□□□ 1.45
CHD1L-209ENST00000492728 HDGFL1Q5TGJ6 251 aa24.08■■□□□ 1.45
CHD1L-209ENST00000492728 ZNF428Q96B54 188 aa24.08■■□□□ 1.45
CHD1L-209ENST00000492728 UTP14AQ9BVJ6 771 aaKnown RBP24.08■■□□□ 1.45
CHD1L-209ENST00000492728 LAMB2P55268 1798 aa24.08■■□□□ 1.44
CHD1L-209ENST00000492728 IARSP41252 1262 aaKnown RBP24.07■■□□□ 1.44
CHD1L-209ENST00000492728 HOXB7P09629 217 aa24.06■■□□□ 1.44
CHD1L-209ENST00000492728 SLC10A5Q5PT55 438 aa24.06■■□□□ 1.44
CHD1L-209ENST00000492728 L3MBTL3Q96JM7 780 aaPredicted RBP24.06■■□□□ 1.44
CHD1L-209ENST00000492728 CRAMP1Q96RY5 1269 aa24.06■■□□□ 1.44
CHD1L-209ENST00000492728 PSMD1Q99460 953 aa24.06■■□□□ 1.44
CHD1L-209ENST00000492728 PPEF1O14829 653 aaPredicted RBP24.05■■□□□ 1.44
CHD1L-209ENST00000492728 TCIRG1Q13488 830 aa24.05■■□□□ 1.44
CHD1L-209ENST00000492728 DUSP27Q5VZP5 1158 aa24.05■■□□□ 1.44
CHD1L-209ENST00000492728 RBM17Q96I25 401 aaKnown RBP24.05■■□□□ 1.44
CHD1L-209ENST00000492728 TCERG1O14776 1098 aaKnown RBP24.04■■□□□ 1.44
CHD1L-209ENST00000492728 HCLS1P14317 486 aaPredicted RBP24.04■■□□□ 1.44
CHD1L-209ENST00000492728 ABCC4O15439 1325 aa24.04■■□□□ 1.44
CHD1L-209ENST00000492728 FZD9O00144 591 aa24.03■■□□□ 1.44
CHD1L-209ENST00000492728 HSP90AB3PQ58FF7 597 aa24.03■■□□□ 1.44
CHD1L-209ENST00000492728 KLRG1Q96E93 195 aa24.03■■□□□ 1.44
CHD1L-209ENST00000492728 NLRP3Q96P20 1036 aa24.03■■□□□ 1.44
CHD1L-209ENST00000492728 RNF123Q5XPI4 1314 aa24.03■■□□□ 1.44
CHD1L-209ENST00000492728 IFT57Q9NWB7 429 aa24.02■■□□□ 1.44
CHD1L-209ENST00000492728 DDX60Q8IY21 1712 aaKnown RBP24.01■■□□□ 1.43
CHD1L-209ENST00000492728 SCN4AP35499 1836 aa24.01■■□□□ 1.43
CHD1L-209ENST00000492728 CC2D2BQ6DHV5 1058 aa24.01■■□□□ 1.43
CHD1L-209ENST00000492728 PLBD2Q8NHP8 589 aa24.01■■□□□ 1.43
CHD1L-209ENST00000492728 TAF1DQ9H5J8 278 aaPredicted RBP24.01■■□□□ 1.43
CHD1L-209ENST00000492728 DBF4Q9UBU7 674 aaPredicted RBP24.01■■□□□ 1.43
CHD1L-209ENST00000492728 PCNTO95613 3336 aa24.01■■□□□ 1.43
CHD1L-209ENST00000492728 COL4A1P02462 1669 aa24.01■■□□□ 1.43
CHD1L-209ENST00000492728 ISCA1Q9BUE6 129 aa24■■□□□ 1.43
CHD1L-209ENST00000492728 TRMT112Q9UI30 125 aaKnown RBP24■■□□□ 1.43
CHD1L-209ENST00000492728 ADAMTSL1Q8N6G6 1762 aa24■■□□□ 1.43
CHD1L-209ENST00000492728 LTBP1Q14766 1721 aa23.99■■□□□ 1.43
CHD1L-209ENST00000492728 CHADLQ6NUI6 762 aa23.99■■□□□ 1.43
CHD1L-209ENST00000492728 SH3TC1Q8TE82 1336 aa23.99■■□□□ 1.43
CHD1L-209ENST00000492728 ATP5J2-PTCD1G3V325 749 aa23.98■■□□□ 1.43
CHD1L-209ENST00000492728 ELL2O00472 640 aaPredicted RBP23.98■■□□□ 1.43
CHD1L-209ENST00000492728 ANKRD13DQ6ZTN6 518 aa23.98■■□□□ 1.43
CHD1L-209ENST00000492728 JMYQ8N9B5 988 aa23.98■■□□□ 1.43
CHD1L-209ENST00000492728 C8orf58Q8NAV2 365 aa23.98■■□□□ 1.43
CHD1L-209ENST00000492728 ATP6V0A2Q9Y487 856 aa23.98■■□□□ 1.43
CHD1L-209ENST00000492728 IQCA1LA6NCM1 817 aa23.97■■□□□ 1.43
CHD1L-209ENST00000492728 TAF1P21675 1872 aa23.97■■□□□ 1.43
CHD1L-209ENST00000492728 GNAI1P63096 354 aa23.97■■□□□ 1.43
CHD1L-209ENST00000492728 PHAXQ9H814 394 aaKnown RBP23.97■■□□□ 1.43
CHD1L-209ENST00000492728 HYPKQ9NX55 129 aa23.96■■□□□ 1.43
CHD1L-209ENST00000492728 DUOX1Q9NRD9 1551 aa23.95■■□□□ 1.43
CHD1L-209ENST00000492728 FAM89AQ96GI7 184 aa23.95■■□□□ 1.42
CHD1L-209ENST00000492728 AOC3Q16853 763 aa23.94■■□□□ 1.42
CHD1L-209ENST00000492728 LDHDQ86WU2 507 aa23.94■■□□□ 1.42
CHD1L-209ENST00000492728 GPC2Q8N158 579 aa23.94■■□□□ 1.42
CHD1L-209ENST00000492728 LARGE2Q8N3Y3 721 aa23.94■■□□□ 1.42
CHD1L-209ENST00000492728 TSPYL6Q8N831 410 aa23.94■■□□□ 1.42
CHD1L-209ENST00000492728 JDP2Q8WYK2 163 aa23.94■■□□□ 1.42
CHD1L-209ENST00000492728 HACL1Q9UJ83 578 aa23.94■■□□□ 1.42
CHD1L-209ENST00000492728 LRRC37AA6NMS7 1700 aa23.93■■□□□ 1.42
CHD1L-209ENST00000492728 PASKQ96RG2 1323 aa23.93■■□□□ 1.42
CHD1L-209ENST00000492728 EPHX2P34913 555 aa23.93■■□□□ 1.42
CHD1L-209ENST00000492728 CALD1Q05682 793 aaKnown RBP23.93■■□□□ 1.42
CHD1L-209ENST00000492728 GRAPQ13588 217 aa23.93■■□□□ 1.42
CHD1L-209ENST00000492728 GRIPAP1Q4V328 841 aa23.93■■□□□ 1.42
CHD1L-209ENST00000492728 GRAPLQ8TC17 118 aaPredicted RBP23.93■■□□□ 1.42
CHD1L-209ENST00000492728 PPIP5K2O43314 1243 aa23.92■■□□□ 1.42
CHD1L-209ENST00000492728 EAPPQ56P03 285 aaPredicted RBP23.92■■□□□ 1.42
CHD1L-209ENST00000492728 TSR2Q969E8 191 aaKnown RBP23.92■■□□□ 1.42
CHD1L-209ENST00000492728 RTFDC1Q9BY42 306 aaPredicted RBP23.92■■□□□ 1.42
CHD1L-209ENST00000492728 RTL5Q5HYW3 569 aaPredicted RBP23.91■■□□□ 1.42
CHD1L-209ENST00000492728 DDX46Q7L014 1031 aaKnown RBP23.91■■□□□ 1.42
CHD1L-209ENST00000492728 GJA3Q9Y6H8 435 aa23.91■■□□□ 1.42
CHD1L-209ENST00000492728 BBOX1O75936 387 aa23.9■■□□□ 1.42
CHD1L-209ENST00000492728 SCNN1DP51172 638 aa23.9■■□□□ 1.42
CHD1L-209ENST00000492728 EIF6P56537 245 aaKnown RBP23.9■■□□□ 1.42
CHD1L-209ENST00000492728 TRIM28Q13263 835 aaKnown RBP23.9■■□□□ 1.42
CHD1L-209ENST00000492728 SP8Q8IXZ3 490 aa23.9■■□□□ 1.42
CHD1L-209ENST00000492728 ITGBL1O95965 494 aaPredicted RBP23.89■■□□□ 1.41
CHD1L-209ENST00000492728 NIM1KQ8IY84 436 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms