RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 HSPA4P34932 840 aa11.36□□□□□ -0.59
VPS8-225ENST00000492449 PDE1AP54750 535 aa11.36□□□□□ -0.59
VPS8-225ENST00000492449 RBM28Q9NW13 759 aaKnown RBP11.36□□□□□ -0.59
VPS8-225ENST00000492449 DNAI1Q9UI46 699 aa11.36□□□□□ -0.59
VPS8-225ENST00000492449 SYCP2Q9BX26 1530 aa11.36□□□□□ -0.59
VPS8-225ENST00000492449 A0A087WUV0 522 aaPredicted RBP11.35□□□□□ -0.59
VPS8-225ENST00000492449 KIF3CO14782 793 aa11.35□□□□□ -0.59
VPS8-225ENST00000492449 LRRFIP1Q32MZ4 808 aaKnown RBP11.35□□□□□ -0.59
VPS8-225ENST00000492449 JAKMIP3Q5VZ66 844 aa11.35□□□□□ -0.59
VPS8-225ENST00000492449 CEP85Q6P2H3 762 aa11.35□□□□□ -0.59
VPS8-225ENST00000492449 CCP110O43303 1012 aa11.35□□□□□ -0.59
VPS8-225ENST00000492449 C21orf2O43822 256 aa11.35□□□□□ -0.59
VPS8-225ENST00000492449 E2F4Q16254 413 aa11.35□□□□□ -0.59
VPS8-225ENST00000492449 TADA2BQ86TJ2 420 aa11.35□□□□□ -0.59
VPS8-225ENST00000492449 TTC6Q86TZ1 520 aa11.35□□□□□ -0.59
VPS8-225ENST00000492449 ARFGAP3Q9NP61 516 aa11.35□□□□□ -0.59
VPS8-225ENST00000492449 A1CFQ9NQ94 594 aaKnown RBP11.35□□□□□ -0.59
VPS8-225ENST00000492449 SMC3Q9UQE7 1217 aa11.35□□□□□ -0.59
VPS8-225ENST00000492449 TET3O43151 1660 aa11.35□□□□□ -0.59
VPS8-225ENST00000492449 PLEKHD1A6NEE1 506 aa11.34□□□□□ -0.59
VPS8-225ENST00000492449 ETF1P62495 437 aaKnown RBP11.34□□□□□ -0.59
VPS8-225ENST00000492449 C11orf91Q3C1V1 193 aa11.34□□□□□ -0.59
VPS8-225ENST00000492449 NOL8Q76FK4 1167 aaKnown RBP11.34□□□□□ -0.59
VPS8-225ENST00000492449 STAG1Q8WVM7 1258 aa11.34□□□□□ -0.59
VPS8-225ENST00000492449 PUS7Q96PZ0 661 aaKnown RBP11.34□□□□□ -0.59
VPS8-225ENST00000492449 FAM107BQ9H098 131 aa11.34□□□□□ -0.59
VPS8-225ENST00000492449 LIMCH1Q9UPQ0 1083 aa11.34□□□□□ -0.59
VPS8-225ENST00000492449 LRRC7Q96NW7 1537 aa11.34□□□□□ -0.59
VPS8-225ENST00000492449 H3BQF6 201 aa11.34□□□□□ -0.59
VPS8-225ENST00000492449 CHMLP26374 656 aa11.34□□□□□ -0.59
VPS8-225ENST00000492449 KRT85P78386 507 aa11.34□□□□□ -0.59
VPS8-225ENST00000492449 CCDC150Q8NCX0 1101 aa11.34□□□□□ -0.59
VPS8-225ENST00000492449 PRAM1Q96QH2 718 aa11.34□□□□□ -0.59
VPS8-225ENST00000492449 DEPDC5O75140 1603 aa11.34□□□□□ -0.59
VPS8-225ENST00000492449 NPHP3Q7Z494 1330 aa11.34□□□□□ -0.59
VPS8-225ENST00000492449 GOLGA6L19H0YKK7 550 aa11.33□□□□□ -0.6
VPS8-225ENST00000492449 RSRC2Q7L4I2 434 aaKnown RBP11.33□□□□□ -0.6
VPS8-225ENST00000492449 TBC1D22AQ8WUA7 517 aa11.33□□□□□ -0.6
VPS8-225ENST00000492449 UPF3BQ9BZI7 483 aaKnown RBP11.33□□□□□ -0.6
VPS8-225ENST00000492449 DNAJC25Q9H1X3 360 aa11.33□□□□□ -0.6
VPS8-225ENST00000492449 DACT1Q9NYF0 836 aa11.33□□□□□ -0.6
VPS8-225ENST00000492449 KIF1BO60333 1816 aa11.33□□□□□ -0.6
VPS8-225ENST00000492449 EIF5P55010 431 aaKnown RBP11.33□□□□□ -0.6
VPS8-225ENST00000492449 MAP2K1Q02750 393 aaPredicted RBP11.33□□□□□ -0.6
VPS8-225ENST00000492449 CAMK4Q16566 473 aa11.33□□□□□ -0.6
VPS8-225ENST00000492449 CKAP2LQ8IYA6 745 aa11.33□□□□□ -0.6
VPS8-225ENST00000492449 HNRNPLLQ8WVV9 542 aaKnown RBP11.33□□□□□ -0.6
VPS8-225ENST00000492449 UTP14AQ9BVJ6 771 aaKnown RBP11.33□□□□□ -0.6
VPS8-225ENST00000492449 MYH15Q9Y2K3 1946 aa11.33□□□□□ -0.6
VPS8-225ENST00000492449 USP8P40818 1118 aa11.32□□□□□ -0.6
VPS8-225ENST00000492449 CCDC151A5D8V7 595 aa11.32□□□□□ -0.6
VPS8-225ENST00000492449 GNAI3P08754 354 aa11.32□□□□□ -0.6
VPS8-225ENST00000492449 CALRP27797 417 aaKnown RBP11.32□□□□□ -0.6
VPS8-225ENST00000492449 EVCP57679 992 aa11.32□□□□□ -0.6
VPS8-225ENST00000492449 BRD3Q15059 726 aa11.32□□□□□ -0.6
VPS8-225ENST00000492449 DNAJC21Q5F1R6 531 aaKnown RBP11.32□□□□□ -0.6
VPS8-225ENST00000492449 RUFY3Q7L099 469 aa11.32□□□□□ -0.6
VPS8-225ENST00000492449 RABGGTAQ92696 567 aa11.32□□□□□ -0.6
VPS8-225ENST00000492449 CCDC34Q96HJ3 373 aa11.32□□□□□ -0.6
VPS8-225ENST00000492449 ATP10BO94823 1461 aa11.32□□□□□ -0.6
VPS8-225ENST00000492449 FOXR1Q6PIV2 292 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 TRIM65Q6PJ69 517 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 ERC1Q8IUD2 1116 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.31□□□□□ -0.6
VPS8-225ENST00000492449 SCAND2PQ9GZW5 306 aaPredicted RBP11.31□□□□□ -0.6
VPS8-225ENST00000492449 ANO2Q9NQ90 1003 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 PDRG1Q9NUG6 133 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 USP16Q9Y5T5 823 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 PARP3Q9Y6F1 533 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 CRYBG1Q9Y4K1 1723 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 PNPLA6Q8IY17 1366 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 PPFIA4O75335 1185 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 GJB2P29033 226 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 AK2P54819 239 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 APOBRQ0VD83 1088 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 LRCH2Q5VUJ6 765 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 LRRC31Q6UY01 552 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 DNAAF4Q8WXU2 420 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 SGSM3Q96HU1 749 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 CHD1O14646 1710 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 GOLIM4O00461 696 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 SRGAP3O43295 1099 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 SMC2O95347 1197 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 PSME1Q06323 249 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 NBPF11Q86T75 865 aa11.31□□□□□ -0.6
VPS8-225ENST00000492449 ZCCHC11Q5TAX3 1644 aaKnown RBP11.31□□□□□ -0.6
VPS8-225ENST00000492449 LONRF2Q1L5Z9 754 aa11.3□□□□□ -0.6
VPS8-225ENST00000492449 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.3□□□□□ -0.6
VPS8-225ENST00000492449 JMYQ8N9B5 988 aa11.3□□□□□ -0.6
VPS8-225ENST00000492449 SLC12A5Q9H2X9 1139 aa11.3□□□□□ -0.6
VPS8-225ENST00000492449 DLG5Q8TDM6 1919 aa11.3□□□□□ -0.6
VPS8-225ENST00000492449 STX1AQ16623 288 aa11.3□□□□□ -0.6
VPS8-225ENST00000492449 MAP9Q49MG5 647 aa11.3□□□□□ -0.6
VPS8-225ENST00000492449 TPRNQ4KMQ1 711 aa11.3□□□□□ -0.6
VPS8-225ENST00000492449 OSCARQ8IYS5 282 aa11.3□□□□□ -0.6
VPS8-225ENST00000492449 RNF217Q8TC41 542 aa11.3□□□□□ -0.6
VPS8-225ENST00000492449 ZSCAN31Q96LW9 406 aaPredicted RBP11.3□□□□□ -0.6
VPS8-225ENST00000492449 SH2B1Q9NRF2 756 aaPredicted RBP11.3□□□□□ -0.6
VPS8-225ENST00000492449 AOX1Q06278 1338 aa11.3□□□□□ -0.6
VPS8-225ENST00000492449 USP5P45974 858 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms