RNA–Protein interactions for RNA: ENST00000492403.1

EPHB4-208, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-208ENST00000492403 ZBED9Q6R2W3 1325 aa13.47□□□□□ -0.25
EPHB4-208ENST00000492403 TNNT2P45379 298 aaPredicted RBP13.47□□□□□ -0.25
EPHB4-208ENST00000492403 ERICH6BQ5W0A0 696 aa13.47□□□□□ -0.25
EPHB4-208ENST00000492403 SLC39A7Q92504 469 aa13.47□□□□□ -0.25
EPHB4-208ENST00000492403 FHDC1Q9C0D6 1143 aaPredicted RBP13.47□□□□□ -0.25
EPHB4-208ENST00000492403 MEGF6O75095 1541 aa13.46□□□□□ -0.25
EPHB4-208ENST00000492403 MPRIPQ6WCQ1 1025 aa13.46□□□□□ -0.25
EPHB4-208ENST00000492403 PANK3Q9H999 370 aa13.46□□□□□ -0.25
EPHB4-208ENST00000492403 LRRC4BQ9NT99 713 aa13.46□□□□□ -0.25
EPHB4-208ENST00000492403 EMILIN1Q9Y6C2 1016 aa13.46□□□□□ -0.25
EPHB4-208ENST00000492403 IVNS1ABPQ9Y6Y0 642 aa13.46□□□□□ -0.25
EPHB4-208ENST00000492403 MYOM1P52179 1685 aa13.45□□□□□ -0.26
EPHB4-208ENST00000492403 CARNS1A5YM72 827 aa13.45□□□□□ -0.26
EPHB4-208ENST00000492403 EVX2Q03828 476 aa13.45□□□□□ -0.26
EPHB4-208ENST00000492403 VAC14Q08AM6 782 aa13.45□□□□□ -0.26
EPHB4-208ENST00000492403 GPR162Q16538 588 aa13.45□□□□□ -0.26
EPHB4-208ENST00000492403 CCDC27Q2M243 656 aa13.45□□□□□ -0.26
EPHB4-208ENST00000492403 RDH13Q8NBN7 331 aa13.45□□□□□ -0.26
EPHB4-208ENST00000492403 SMARCC1Q92922 1105 aaPredicted RBP13.45□□□□□ -0.26
EPHB4-208ENST00000492403 SYT17Q9BSW7 474 aa13.45□□□□□ -0.26
EPHB4-208ENST00000492403 CARD14Q9BXL6 1004 aa13.45□□□□□ -0.26
EPHB4-208ENST00000492403 POTEFA5A3E0 1075 aa13.44□□□□□ -0.26
EPHB4-208ENST00000492403 PALM3A6NDB9 673 aaPredicted RBP13.44□□□□□ -0.26
EPHB4-208ENST00000492403 KDM4AO75164 1064 aa13.44□□□□□ -0.26
EPHB4-208ENST00000492403 KCNQ4P56696 695 aa13.44□□□□□ -0.26
EPHB4-208ENST00000492403 ZNF827Q17R98 1081 aa13.44□□□□□ -0.26
EPHB4-208ENST00000492403 LMOD1P29536 600 aaPredicted RBP13.43□□□□□ -0.26
EPHB4-208ENST00000492403 NUDT18Q6ZVK8 323 aa13.43□□□□□ -0.26
EPHB4-208ENST00000492403 FLAD1Q8NFF5 587 aa13.43□□□□□ -0.26
EPHB4-208ENST00000492403 HMX1Q9NP08 348 aaPredicted RBP13.43□□□□□ -0.26
EPHB4-208ENST00000492403 MAP2P11137 1827 aaKnown RBP13.43□□□□□ -0.26
EPHB4-208ENST00000492403 PER1O15534 1290 aaPredicted RBP13.42□□□□□ -0.26
EPHB4-208ENST00000492403 PNISRQ8TF01 805 aaKnown RBP13.42□□□□□ -0.26
EPHB4-208ENST00000492403 TMEM134Q9H6X4 195 aa13.42□□□□□ -0.26
EPHB4-208ENST00000492403 NPC1L1Q9UHC9 1359 aa13.42□□□□□ -0.26
EPHB4-208ENST00000492403 NBPF26B4DH59 902 aa13.41□□□□□ -0.26
EPHB4-208ENST00000492403 MORC1Q86VD1 984 aa13.41□□□□□ -0.26
EPHB4-208ENST00000492403 TRIM34Q9BYJ4 488 aa13.41□□□□□ -0.26
EPHB4-208ENST00000492403 VRTNQ9H8Y1 702 aa13.41□□□□□ -0.26
EPHB4-208ENST00000492403 TMOD3Q9NYL9 352 aa13.41□□□□□ -0.26
EPHB4-208ENST00000492403 PAPPAQ13219 1627 aa13.4□□□□□ -0.26
EPHB4-208ENST00000492403 LY75O60449 1722 aa13.4□□□□□ -0.26
EPHB4-208ENST00000492403 SHANK3Q9BYB0 1731 aa13.4□□□□□ -0.26
EPHB4-208ENST00000492403 FDX1P10109 184 aa13.4□□□□□ -0.26
EPHB4-208ENST00000492403 C7P10643 843 aa13.4□□□□□ -0.26
EPHB4-208ENST00000492403 USP46P62068 366 aa13.4□□□□□ -0.26
EPHB4-208ENST00000492403 CTDSPL2Q05D32 466 aa13.4□□□□□ -0.26
EPHB4-208ENST00000492403 SND1Q7KZF4 910 aaKnown RBP eCLIP13.4□□□□□ -0.26
EPHB4-208ENST00000492403 IFNL2Q8IZJ0 200 aa13.4□□□□□ -0.26
EPHB4-208ENST00000492403 ALG2Q9H553 416 aa13.4□□□□□ -0.26
EPHB4-208ENST00000492403 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.4□□□□□ -0.26
EPHB4-208ENST00000492403 PALLDQ8WX93 1383 aa13.4□□□□□ -0.26
EPHB4-208ENST00000492403 PNPLA7Q6ZV29 1317 aa13.39□□□□□ -0.27
EPHB4-208ENST00000492403 QSER1Q2KHR3 1735 aa13.39□□□□□ -0.27
EPHB4-208ENST00000492403 GPR37L1O60883 481 aa13.39□□□□□ -0.27
EPHB4-208ENST00000492403 IGSF3O75054 1194 aa13.39□□□□□ -0.27
EPHB4-208ENST00000492403 NUDT7P0C024 238 aa13.39□□□□□ -0.27
EPHB4-208ENST00000492403 COL9A1P20849 921 aa13.39□□□□□ -0.27
EPHB4-208ENST00000492403 DCBLD2Q96PD2 775 aa13.39□□□□□ -0.27
EPHB4-208ENST00000492403 POLKQ9UBT6 870 aa13.39□□□□□ -0.27
EPHB4-208ENST00000492403 TSKSQ9UJT2 592 aa13.39□□□□□ -0.27
EPHB4-208ENST00000492403 PNMA3Q9UL41 463 aa13.39□□□□□ -0.27
EPHB4-208ENST00000492403 SUPT16HQ9Y5B9 1047 aaKnown RBP13.39□□□□□ -0.27
EPHB4-208ENST00000492403 CYP27B1O15528 508 aa13.38□□□□□ -0.27
EPHB4-208ENST00000492403 HOXA2O43364 376 aa13.38□□□□□ -0.27
EPHB4-208ENST00000492403 HSP90AB1P08238 724 aaKnown RBP13.38□□□□□ -0.27
EPHB4-208ENST00000492403 HELBQ8NG08 1087 aaPredicted RBP13.38□□□□□ -0.27
EPHB4-208ENST00000492403 TFIP11Q9UBB9 837 aaKnown RBP13.38□□□□□ -0.27
EPHB4-208ENST00000492403 ANKRD26Q9UPS8 1709 aa13.38□□□□□ -0.27
EPHB4-208ENST00000492403 NSD2O96028 1365 aa13.37□□□□□ -0.27
EPHB4-208ENST00000492403 CNGB1Q14028 1251 aaPredicted RBP13.37□□□□□ -0.27
EPHB4-208ENST00000492403 PLEKHO1Q53GL0 409 aaPredicted RBP13.37□□□□□ -0.27
EPHB4-208ENST00000492403 C3orf80F5H4A9 247 aa13.36□□□□□ -0.27
EPHB4-208ENST00000492403 ATG7O95352 703 aa13.36□□□□□ -0.27
EPHB4-208ENST00000492403 C1orf141Q5JVX7 400 aa13.36□□□□□ -0.27
EPHB4-208ENST00000492403 MSL1Q68DK7 614 aa13.36□□□□□ -0.27
EPHB4-208ENST00000492403 COL23A1Q86Y22 540 aaPredicted RBP13.36□□□□□ -0.27
EPHB4-208ENST00000492403 TSC1Q92574 1164 aa13.36□□□□□ -0.27
EPHB4-208ENST00000492403 TATDN2Q93075 761 aa13.36□□□□□ -0.27
EPHB4-208ENST00000492403 C5P01031 1676 aa13.36□□□□□ -0.27
EPHB4-208ENST00000492403 MAP3K5Q99683 1374 aa13.35□□□□□ -0.27
EPHB4-208ENST00000492403 SOX11P35716 441 aa13.35□□□□□ -0.27
EPHB4-208ENST00000492403 EIF4A2Q14240 407 aaKnown RBP13.35□□□□□ -0.27
EPHB4-208ENST00000492403 AMOTQ4VCS5 1084 aa13.35□□□□□ -0.27
EPHB4-208ENST00000492403 CCDC184Q52MB2 194 aa13.35□□□□□ -0.27
EPHB4-208ENST00000492403 CC2D1BQ5T0F9 858 aaKnown RBP13.35□□□□□ -0.27
EPHB4-208ENST00000492403 NGEFQ8N5V2 710 aa13.35□□□□□ -0.27
EPHB4-208ENST00000492403 PIGBQ92521 554 aa13.35□□□□□ -0.27
EPHB4-208ENST00000492403 UCN2Q96RP3 112 aa13.35□□□□□ -0.27
EPHB4-208ENST00000492403 PKD1L3Q7Z443 1732 aa13.35□□□□□ -0.27
EPHB4-208ENST00000492403 ITGB4P16144 1822 aa13.34□□□□□ -0.27
EPHB4-208ENST00000492403 PHKG2P15735 406 aa13.34□□□□□ -0.27
EPHB4-208ENST00000492403 ATP6V1AP38606 617 aa13.34□□□□□ -0.27
EPHB4-208ENST00000492403 WDR43Q15061 677 aaKnown RBP eCLIP13.34□□□□□ -0.27
EPHB4-208ENST00000492403 METRNQ9UJH8 293 aa13.34□□□□□ -0.27
EPHB4-208ENST00000492403 TMEM88BA6NKF7 163 aa13.33□□□□□ -0.28
EPHB4-208ENST00000492403 GRIN3BO60391 1043 aa13.33□□□□□ -0.28
EPHB4-208ENST00000492403 GCGRP47871 477 aa13.33□□□□□ -0.28
EPHB4-208ENST00000492403 CABP4P57796 275 aa13.33□□□□□ -0.28
EPHB4-208ENST00000492403 ZNF530Q6P9A1 599 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms