RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 PPP1R12CQ9BZL4 782 aa7.46□□□□□ -1.22
VTA1-204ENST00000491881 HCN4Q9Y3Q4 1203 aa7.46□□□□□ -1.22
VTA1-204ENST00000491881 PALM3A6NDB9 673 aaPredicted RBP7.45□□□□□ -1.22
VTA1-204ENST00000491881 H2AFB1P0C5Y9 115 aa7.45□□□□□ -1.22
VTA1-204ENST00000491881 H2AFB2P0C5Z0 115 aa7.45□□□□□ -1.22
VTA1-204ENST00000491881 ELNP15502 786 aa7.45□□□□□ -1.22
VTA1-204ENST00000491881 KCNQ4P56696 695 aa7.45□□□□□ -1.22
VTA1-204ENST00000491881 RAC1P63000 192 aa7.45□□□□□ -1.22
VTA1-204ENST00000491881 MBTPS1Q14703 1052 aa7.45□□□□□ -1.22
VTA1-204ENST00000491881 TPCN2Q8NHX9 752 aa7.45□□□□□ -1.22
VTA1-204ENST00000491881 UBE2OQ9C0C9 1292 aaKnown RBP7.45□□□□□ -1.22
VTA1-204ENST00000491881 PHACTR1Q9C0D0 580 aa7.45□□□□□ -1.22
VTA1-204ENST00000491881 TSPAN10Q9H1Z9 355 aaPredicted RBP7.45□□□□□ -1.22
VTA1-204ENST00000491881 IGFLR1Q9H665 355 aa7.45□□□□□ -1.22
VTA1-204ENST00000491881 A0A0A0MRY4 1105 aa7.44□□□□□ -1.22
VTA1-204ENST00000491881 SELPP16109 830 aa7.44□□□□□ -1.22
VTA1-204ENST00000491881 ATP1A2P50993 1020 aa7.44□□□□□ -1.22
VTA1-204ENST00000491881 NRG1Q02297 640 aaPredicted RBP7.44□□□□□ -1.22
VTA1-204ENST00000491881 TYRO3Q06418 890 aa7.44□□□□□ -1.22
VTA1-204ENST00000491881 TXNRD3Q86VQ6 643 aa7.44□□□□□ -1.22
VTA1-204ENST00000491881 SUSD3Q96L08 255 aa7.44□□□□□ -1.22
VTA1-204ENST00000491881 JPH1Q9HDC5 661 aaPredicted RBP7.44□□□□□ -1.22
VTA1-204ENST00000491881 TFIP11Q9UBB9 837 aaKnown RBP7.44□□□□□ -1.22
VTA1-204ENST00000491881 ATP9BO43861 1147 aa7.43□□□□□ -1.22
VTA1-204ENST00000491881 RFX1P22670 979 aa7.43□□□□□ -1.22
VTA1-204ENST00000491881 LMOD1P29536 600 aaPredicted RBP7.43□□□□□ -1.22
VTA1-204ENST00000491881 HIRAP54198 1017 aaPredicted RBP7.43□□□□□ -1.22
VTA1-204ENST00000491881 CCDC102BQ68D86 513 aa7.43□□□□□ -1.22
VTA1-204ENST00000491881 KRTAP1-3Q8IUG1 177 aa7.43□□□□□ -1.22
VTA1-204ENST00000491881 ZNF280CQ8ND82 737 aa7.43□□□□□ -1.22
VTA1-204ENST00000491881 NUDT8Q8WV74 236 aa7.43□□□□□ -1.22
VTA1-204ENST00000491881 KIAA1024Q9UPX6 916 aa7.43□□□□□ -1.22
VTA1-204ENST00000491881 LRP8Q14114 963 aa7.42□□□□□ -1.22
VTA1-204ENST00000491881 SHISA2Q6UWI4 295 aa7.42□□□□□ -1.22
VTA1-204ENST00000491881 TP53INP1Q96A56 240 aa7.42□□□□□ -1.22
VTA1-204ENST00000491881 LENG1Q96BZ8 264 aaPredicted RBP7.42□□□□□ -1.22
VTA1-204ENST00000491881 ARXQ96QS3 562 aa7.42□□□□□ -1.22
VTA1-204ENST00000491881 USP21Q9UK80 565 aa7.42□□□□□ -1.22
VTA1-204ENST00000491881 SLC6A14Q9UN76 642 aa7.42□□□□□ -1.22
VTA1-204ENST00000491881 MAFBQ9Y5Q3 323 aaPredicted RBP7.42□□□□□ -1.22
VTA1-204ENST00000491881 ZBTB7BO15156 539 aaPredicted RBP7.41□□□□□ -1.22
VTA1-204ENST00000491881 CFAP70Q5T0N1 1121 aa7.41□□□□□ -1.22
VTA1-204ENST00000491881 PPP1R12BO60237 982 aaPredicted RBP7.4□□□□□ -1.22
VTA1-204ENST00000491881 CLDN10P78369 228 aa7.4□□□□□ -1.22
VTA1-204ENST00000491881 POTEAQ6S8J7 498 aa7.4□□□□□ -1.22
VTA1-204ENST00000491881 USP17L3A6NCW0 530 aa7.39□□□□□ -1.23
VTA1-204ENST00000491881 USP17L4A6NCW7 530 aa7.39□□□□□ -1.23
VTA1-204ENST00000491881 HIF1AQ16665 826 aa7.39□□□□□ -1.23
VTA1-204ENST00000491881 PSAPL1Q6NUJ1 521 aa7.39□□□□□ -1.23
VTA1-204ENST00000491881 USP17L2Q6R6M4 530 aa7.39□□□□□ -1.23
VTA1-204ENST00000491881 USP17L1Q7RTZ2 530 aa7.39□□□□□ -1.23
VTA1-204ENST00000491881 BTLAQ7Z6A9 289 aa7.39□□□□□ -1.23
VTA1-204ENST00000491881 PLEKHM2Q8IWE5 1019 aa7.39□□□□□ -1.23
VTA1-204ENST00000491881 HOMEZQ8IX15 550 aa7.39□□□□□ -1.23
VTA1-204ENST00000491881 ALDH16A1Q8IZ83 802 aa7.39□□□□□ -1.23
VTA1-204ENST00000491881 PBXIP1Q96AQ6 731 aa7.39□□□□□ -1.23
VTA1-204ENST00000491881 PNMA5Q96PV4 448 aa7.39□□□□□ -1.23
VTA1-204ENST00000491881 EFCC1Q9HA90 598 aa7.39□□□□□ -1.23
VTA1-204ENST00000491881 DNAJB12Q9NXW2 375 aaKnown RBP7.39□□□□□ -1.23
VTA1-204ENST00000491881 RBM19Q9Y4C8 960 aaKnown RBP7.39□□□□□ -1.23
VTA1-204ENST00000491881 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.38□□□□□ -1.23
VTA1-204ENST00000491881 M0R2N6 131 aa7.38□□□□□ -1.23
VTA1-204ENST00000491881 HYAL3O43820 417 aaPredicted RBP7.38□□□□□ -1.23
VTA1-204ENST00000491881 PPP1R15AO75807 674 aaPredicted RBP7.38□□□□□ -1.23
VTA1-204ENST00000491881 RGS9O75916 674 aaPredicted RBP7.38□□□□□ -1.23
VTA1-204ENST00000491881 AFF1P51825 1210 aaKnown RBP7.38□□□□□ -1.23
VTA1-204ENST00000491881 DMRTC2Q8IXT2 367 aaPredicted RBP7.38□□□□□ -1.23
VTA1-204ENST00000491881 FMR1NBQ8N0W7 255 aaPredicted RBP7.38□□□□□ -1.23
VTA1-204ENST00000491881 LARGE2Q8N3Y3 721 aa7.38□□□□□ -1.23
VTA1-204ENST00000491881 OGFOD1Q8N543 542 aa7.38□□□□□ -1.23
VTA1-204ENST00000491881 TSEN2Q8NCE0 465 aaKnown RBP7.38□□□□□ -1.23
VTA1-204ENST00000491881 ACIN1Q9UKV3 1341 aaKnown RBP7.37□□□□□ -1.23
VTA1-204ENST00000491881 NGLY1Q96IV0 654 aa7.37□□□□□ -1.23
VTA1-204ENST00000491881 KRTAP4-12Q9BQ66 201 aa7.37□□□□□ -1.23
VTA1-204ENST00000491881 VRTNQ9H8Y1 702 aa7.36□□□□□ -1.23
VTA1-204ENST00000491881 NAGPAQ9UK23 515 aa7.36□□□□□ -1.23
VTA1-204ENST00000491881 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.36□□□□□ -1.23
VTA1-204ENST00000491881 NFKB1P19838 968 aa7.35□□□□□ -1.23
VTA1-204ENST00000491881 LCE3BQ5TA77 95 aa7.35□□□□□ -1.23
VTA1-204ENST00000491881 CHMP7Q8WUX9 453 aaPredicted RBP7.35□□□□□ -1.23
VTA1-204ENST00000491881 ZNF594Q96JF6 807 aaPredicted RBP7.35□□□□□ -1.23
VTA1-204ENST00000491881 SSBP4Q9BWG4 385 aaPredicted RBP7.35□□□□□ -1.23
VTA1-204ENST00000491881 GSX2Q9BZM3 304 aa7.35□□□□□ -1.23
VTA1-204ENST00000491881 MKRN1Q9UHC7 482 aaKnown RBP7.35□□□□□ -1.23
VTA1-204ENST00000491881 ATAD2Q6PL18 1390 aa7.34□□□□□ -1.23
VTA1-204ENST00000491881 C21orf2O43822 256 aa7.34□□□□□ -1.23
VTA1-204ENST00000491881 CCINQ13939 588 aa7.34□□□□□ -1.23
VTA1-204ENST00000491881 CDCA8Q53HL2 280 aa7.34□□□□□ -1.23
VTA1-204ENST00000491881 MSL1Q68DK7 614 aa7.34□□□□□ -1.23
VTA1-204ENST00000491881 FAM35AQ86V20 835 aa7.34□□□□□ -1.23
VTA1-204ENST00000491881 SIX5Q8N196 739 aa7.34□□□□□ -1.23
VTA1-204ENST00000491881 STAG2Q8N3U4 1231 aa7.34□□□□□ -1.23
VTA1-204ENST00000491881 C2orf49Q9BVC5 232 aaPredicted RBP7.34□□□□□ -1.23
VTA1-204ENST00000491881 PCSK7Q16549 785 aa7.33□□□□□ -1.24
VTA1-204ENST00000491881 LARP1Q6PKG0 1096 aaKnown RBP7.33□□□□□ -1.24
VTA1-204ENST00000491881 GAS2L2Q8NHY3 880 aa7.33□□□□□ -1.24
VTA1-204ENST00000491881 SCG3Q8WXD2 468 aaKnown RBP7.33□□□□□ -1.24
VTA1-204ENST00000491881 CPB1P15086 417 aa7.32□□□□□ -1.24
VTA1-204ENST00000491881 RASA1P20936 1047 aa7.32□□□□□ -1.24
VTA1-204ENST00000491881 KANK4Q5T7N3 995 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms