RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 C3orf67Q6ZVT6 689 aa14.43□□□□□ -0.1
TMEM39A-211ENST00000491685 MRS2Q9HD23 443 aa14.43□□□□□ -0.1
TMEM39A-211ENST00000491685 ZNF277Q9NRM2 450 aaPredicted RBP14.43□□□□□ -0.1
TMEM39A-211ENST00000491685 LTBP1Q14766 1721 aa14.43□□□□□ -0.1
TMEM39A-211ENST00000491685 DDX60Q8IY21 1712 aaKnown RBP14.43□□□□□ -0.1
TMEM39A-211ENST00000491685 ERBB4Q15303 1308 aa14.42□□□□□ -0.1
TMEM39A-211ENST00000491685 NTSR2O95665 410 aa14.42□□□□□ -0.1
TMEM39A-211ENST00000491685 EIF2S2P20042 333 aaKnown RBP14.42□□□□□ -0.1
TMEM39A-211ENST00000491685 GTF2E1P29083 439 aaPredicted RBP14.42□□□□□ -0.1
TMEM39A-211ENST00000491685 FKBP4Q02790 459 aaKnown RBP eCLIP14.42□□□□□ -0.1
TMEM39A-211ENST00000491685 SOGA3Q5TF21 947 aa14.42□□□□□ -0.1
TMEM39A-211ENST00000491685 ZNF34Q8IZ26 560 aa14.42□□□□□ -0.1
TMEM39A-211ENST00000491685 NEUROD2Q15784 382 aa14.41□□□□□ -0.1
TMEM39A-211ENST00000491685 DPY19L2Q6NUT2 758 aa14.41□□□□□ -0.1
TMEM39A-211ENST00000491685 NECTIN2Q92692 538 aa14.41□□□□□ -0.1
TMEM39A-211ENST00000491685 GIGYF2Q6Y7W6 1299 aaKnown RBP14.4□□□□□ -0.1
TMEM39A-211ENST00000491685 NYXQ9GZU5 481 aa14.4□□□□□ -0.1
TMEM39A-211ENST00000491685 TRIM35Q9UPQ4 493 aa14.4□□□□□ -0.1
TMEM39A-211ENST00000491685 COL4A1P02462 1669 aa14.39□□□□□ -0.11
TMEM39A-211ENST00000491685 CCER2I3L3R5 266 aa14.39□□□□□ -0.11
TMEM39A-211ENST00000491685 CREBZFQ9NS37 354 aa14.39□□□□□ -0.11
TMEM39A-211ENST00000491685 IARSP41252 1262 aaKnown RBP14.38□□□□□ -0.11
TMEM39A-211ENST00000491685 LMOD3Q0VAK6 560 aa14.38□□□□□ -0.11
TMEM39A-211ENST00000491685 SYNE4Q8N205 404 aa14.38□□□□□ -0.11
TMEM39A-211ENST00000491685 ADAMTS8Q9UP79 889 aa14.38□□□□□ -0.11
TMEM39A-211ENST00000491685 CHL1O00533 1208 aa14.37□□□□□ -0.11
TMEM39A-211ENST00000491685 SLC34A2O95436 690 aa14.37□□□□□ -0.11
TMEM39A-211ENST00000491685 ALDH1B1P30837 517 aa14.37□□□□□ -0.11
TMEM39A-211ENST00000491685 HOXA10P31260 410 aaPredicted RBP14.37□□□□□ -0.11
TMEM39A-211ENST00000491685 RTKN2Q8IZC4 609 aa14.37□□□□□ -0.11
TMEM39A-211ENST00000491685 XAGE3Q8WTP9 111 aa14.37□□□□□ -0.11
TMEM39A-211ENST00000491685 RPGRQ92834 1020 aaKnown RBP14.37□□□□□ -0.11
TMEM39A-211ENST00000491685 ZNF428Q96B54 188 aa14.37□□□□□ -0.11
TMEM39A-211ENST00000491685 RUNDC1Q96C34 613 aa14.37□□□□□ -0.11
TMEM39A-211ENST00000491685 L3MBTL3Q96JM7 780 aaPredicted RBP14.37□□□□□ -0.11
TMEM39A-211ENST00000491685 BABAM1Q9NWV8 329 aa14.37□□□□□ -0.11
TMEM39A-211ENST00000491685 LRRC37AA6NMS7 1700 aa14.37□□□□□ -0.11
TMEM39A-211ENST00000491685 TCERG1O14776 1098 aaKnown RBP14.36□□□□□ -0.11
TMEM39A-211ENST00000491685 AIMP1Q12904 312 aaKnown RBP14.36□□□□□ -0.11
TMEM39A-211ENST00000491685 CHADLQ6NUI6 762 aa14.36□□□□□ -0.11
TMEM39A-211ENST00000491685 COPS6Q7L5N1 327 aa14.36□□□□□ -0.11
TMEM39A-211ENST00000491685 TAF1DQ9H5J8 278 aaPredicted RBP14.36□□□□□ -0.11
TMEM39A-211ENST00000491685 LAS1LQ9Y4W2 734 aaKnown RBP14.36□□□□□ -0.11
TMEM39A-211ENST00000491685 DUOX1Q9NRD9 1551 aa14.35□□□□□ -0.11
TMEM39A-211ENST00000491685 FZD9O00144 591 aa14.35□□□□□ -0.11
TMEM39A-211ENST00000491685 PPEF1O14829 653 aaPredicted RBP14.35□□□□□ -0.11
TMEM39A-211ENST00000491685 PSMD1Q99460 953 aa14.35□□□□□ -0.11
TMEM39A-211ENST00000491685 PRDM10Q9NQV6 1147 aa14.35□□□□□ -0.11
TMEM39A-211ENST00000491685 CHPF2Q9P2E5 772 aa14.35□□□□□ -0.11
TMEM39A-211ENST00000491685 RNF123Q5XPI4 1314 aa14.35□□□□□ -0.11
TMEM39A-211ENST00000491685 CNTNAP1P78357 1384 aa14.34□□□□□ -0.11
TMEM39A-211ENST00000491685 FOXN1O15353 648 aa14.34□□□□□ -0.11
TMEM39A-211ENST00000491685 PARP10Q53GL7 1025 aa14.34□□□□□ -0.11
TMEM39A-211ENST00000491685 PPP1R42Q7Z4L9 355 aa14.34□□□□□ -0.11
TMEM39A-211ENST00000491685 CRAMP1Q96RY5 1269 aa14.34□□□□□ -0.11
TMEM39A-211ENST00000491685 UTP14AQ9BVJ6 771 aaKnown RBP14.34□□□□□ -0.11
TMEM39A-211ENST00000491685 MKRN1Q9UHC7 482 aaKnown RBP14.34□□□□□ -0.11
TMEM39A-211ENST00000491685 ABCC4O15439 1325 aa14.34□□□□□ -0.11
TMEM39A-211ENST00000491685 IQCA1LA6NCM1 817 aa14.33□□□□□ -0.12
TMEM39A-211ENST00000491685 NLRP10Q86W26 655 aa14.33□□□□□ -0.12
TMEM39A-211ENST00000491685 FAM9BQ8IZU0 186 aa14.33□□□□□ -0.12
TMEM39A-211ENST00000491685 MIER1Q8N108 512 aa14.33□□□□□ -0.12
TMEM39A-211ENST00000491685 RBM17Q96I25 401 aaKnown RBP14.33□□□□□ -0.12
TMEM39A-211ENST00000491685 DDX21Q9NR30 783 aaKnown RBP eCLIP14.33□□□□□ -0.12
TMEM39A-211ENST00000491685 PASKQ96RG2 1323 aa14.33□□□□□ -0.12
TMEM39A-211ENST00000491685 HCLS1P14317 486 aaPredicted RBP14.32□□□□□ -0.12
TMEM39A-211ENST00000491685 CCDC184Q52MB2 194 aa14.32□□□□□ -0.12
TMEM39A-211ENST00000491685 EAPPQ56P03 285 aaPredicted RBP14.32□□□□□ -0.12
TMEM39A-211ENST00000491685 SLC10A5Q5PT55 438 aa14.32□□□□□ -0.12
TMEM39A-211ENST00000491685 LDHDQ86WU2 507 aa14.32□□□□□ -0.12
TMEM39A-211ENST00000491685 EPHX2P34913 555 aa14.31□□□□□ -0.12
TMEM39A-211ENST00000491685 TCIRG1Q13488 830 aa14.31□□□□□ -0.12
TMEM39A-211ENST00000491685 HDGFL1Q5TGJ6 251 aa14.31□□□□□ -0.12
TMEM39A-211ENST00000491685 CC2D2BQ6DHV5 1058 aa14.31□□□□□ -0.12
TMEM39A-211ENST00000491685 NLRP3Q96P20 1036 aa14.31□□□□□ -0.12
TMEM39A-211ENST00000491685 MBIPQ9NS73 344 aa14.31□□□□□ -0.12
TMEM39A-211ENST00000491685 HACL1Q9UJ83 578 aa14.31□□□□□ -0.12
TMEM39A-211ENST00000491685 CTCFP49711 727 aaPredicted RBP14.3□□□□□ -0.12
TMEM39A-211ENST00000491685 GPC2Q8N158 579 aa14.3□□□□□ -0.12
TMEM39A-211ENST00000491685 GJA3Q9Y6H8 435 aa14.3□□□□□ -0.12
TMEM39A-211ENST00000491685 TRPM7Q96QT4 1865 aa14.29□□□□□ -0.12
TMEM39A-211ENST00000491685 APAF1O14727 1248 aa14.29□□□□□ -0.12
TMEM39A-211ENST00000491685 ITGBL1O95965 494 aaPredicted RBP14.29□□□□□ -0.12
TMEM39A-211ENST00000491685 ZNF853P0CG23 659 aa14.29□□□□□ -0.12
TMEM39A-211ENST00000491685 AOC3Q16853 763 aa14.29□□□□□ -0.12
TMEM39A-211ENST00000491685 HSP90AB3PQ58FF7 597 aa14.29□□□□□ -0.12
TMEM39A-211ENST00000491685 DUSP27Q5VZP5 1158 aa14.29□□□□□ -0.12
TMEM39A-211ENST00000491685 LARGE2Q8N3Y3 721 aa14.29□□□□□ -0.12
TMEM39A-211ENST00000491685 JDP2Q8WYK2 163 aa14.29□□□□□ -0.12
TMEM39A-211ENST00000491685 AIDAQ96BJ3 306 aa14.29□□□□□ -0.12
TMEM39A-211ENST00000491685 CFAP44Q96MT7 982 aa14.29□□□□□ -0.12
TMEM39A-211ENST00000491685 TRMT112Q9UI30 125 aaKnown RBP14.29□□□□□ -0.12
TMEM39A-211ENST00000491685 ATP6V0A2Q9Y487 856 aa14.29□□□□□ -0.12
TMEM39A-211ENST00000491685 THSD7BQ9C0I4 1608 aa14.29□□□□□ -0.12
TMEM39A-211ENST00000491685 ATP5J2-PTCD1G3V325 749 aa14.28□□□□□ -0.12
TMEM39A-211ENST00000491685 HOXB7P09629 217 aa14.28□□□□□ -0.12
TMEM39A-211ENST00000491685 SCNN1DP51172 638 aa14.28□□□□□ -0.12
TMEM39A-211ENST00000491685 MAP1SQ66K74 1059 aaPredicted RBP14.28□□□□□ -0.12
TMEM39A-211ENST00000491685 PLBD2Q8NHP8 589 aa14.28□□□□□ -0.12
TMEM39A-211ENST00000491685 SH3TC1Q8TE82 1336 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms