RNA–Protein interactions for RNA: ENST00000491162.1

CLCN2-209, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 4

Gene CLCN2, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-209ENST00000491162 DDX60Q8IY21 1712 aaKnown RBP15.04■□□□□ -0
CLCN2-209ENST00000491162 COL4A1P02462 1669 aa15.04■□□□□ -0
CLCN2-209ENST00000491162 RNF123Q5XPI4 1314 aa15.04■□□□□ -0
CLCN2-209ENST00000491162 IARSP41252 1262 aaKnown RBP15.04■□□□□ -0
CLCN2-209ENST00000491162 TMPOP42166 694 aaKnown RBP15.04■□□□□ -0
CLCN2-209ENST00000491162 DDX10Q13206 875 aaKnown RBP15.04■□□□□ -0
CLCN2-209ENST00000491162 MKRN1Q9UHC7 482 aaKnown RBP15.04■□□□□ -0
CLCN2-209ENST00000491162 RIC1Q4ADV7 1423 aa15.03■□□□□ -0
CLCN2-209ENST00000491162 HSPA1AP0DMV8 641 aaKnown RBP15.03■□□□□ -0
CLCN2-209ENST00000491162 HSPA1BP0DMV9 641 aaKnown RBP15.03■□□□□ -0
CLCN2-209ENST00000491162 NEUROD2Q15784 382 aa15.03■□□□□ -0
CLCN2-209ENST00000491162 EAPPQ56P03 285 aaPredicted RBP15.03■□□□□ -0
CLCN2-209ENST00000491162 L3MBTL3Q96JM7 780 aaPredicted RBP15.03■□□□□ -0
CLCN2-209ENST00000491162 ALDH1B1P30837 517 aa15.02■□□□□ -0
CLCN2-209ENST00000491162 GIGYF2Q6Y7W6 1299 aaKnown RBP15.02■□□□□ -0
CLCN2-209ENST00000491162 NYXQ9GZU5 481 aa15.02■□□□□ -0
CLCN2-209ENST00000491162 IBTKQ9P2D0 1353 aaPredicted RBP15.01□□□□□ -0.01
CLCN2-209ENST00000491162 PASKQ96RG2 1323 aa15.01□□□□□ -0.01
CLCN2-209ENST00000491162 FZD9O00144 591 aa15.01□□□□□ -0.01
CLCN2-209ENST00000491162 RTKN2Q8IZC4 609 aa15.01□□□□□ -0.01
CLCN2-209ENST00000491162 RPGRQ92834 1020 aaKnown RBP15.01□□□□□ -0.01
CLCN2-209ENST00000491162 CAPN15O75808 1086 aa15□□□□□ -0.01
CLCN2-209ENST00000491162 HOXA10P31260 410 aaPredicted RBP15□□□□□ -0.01
CLCN2-209ENST00000491162 FMR1Q06787 632 aaKnown RBP eCLIP15□□□□□ -0.01
CLCN2-209ENST00000491162 AIMP1Q12904 312 aaKnown RBP15□□□□□ -0.01
CLCN2-209ENST00000491162 PPEF1O14829 653 aaPredicted RBP14.99□□□□□ -0.01
CLCN2-209ENST00000491162 ITGBL1O95965 494 aaPredicted RBP14.99□□□□□ -0.01
CLCN2-209ENST00000491162 EPHX2P34913 555 aa14.99□□□□□ -0.01
CLCN2-209ENST00000491162 RALBP1Q15311 655 aa14.99□□□□□ -0.01
CLCN2-209ENST00000491162 MAP1SQ66K74 1059 aaPredicted RBP14.99□□□□□ -0.01
CLCN2-209ENST00000491162 LDHDQ86WU2 507 aa14.99□□□□□ -0.01
CLCN2-209ENST00000491162 XAGE3Q8WTP9 111 aa14.99□□□□□ -0.01
CLCN2-209ENST00000491162 PSMD1Q99460 953 aa14.99□□□□□ -0.01
CLCN2-209ENST00000491162 CREBZFQ9NS37 354 aa14.99□□□□□ -0.01
CLCN2-209ENST00000491162 HACL1Q9UJ83 578 aa14.99□□□□□ -0.01
CLCN2-209ENST00000491162 TRIM35Q9UPQ4 493 aa14.99□□□□□ -0.01
CLCN2-209ENST00000491162 LAS1LQ9Y4W2 734 aaKnown RBP14.99□□□□□ -0.01
CLCN2-209ENST00000491162 GJA3Q9Y6H8 435 aa14.99□□□□□ -0.01
CLCN2-209ENST00000491162 ERBB4Q15303 1308 aa14.98□□□□□ -0.01
CLCN2-209ENST00000491162 IQCA1LA6NCM1 817 aa14.98□□□□□ -0.01
CLCN2-209ENST00000491162 HCLS1P14317 486 aaPredicted RBP14.98□□□□□ -0.01
CLCN2-209ENST00000491162 COPS6Q7L5N1 327 aa14.98□□□□□ -0.01
CLCN2-209ENST00000491162 PNNQ9H307 717 aaKnown RBP14.98□□□□□ -0.01
CLCN2-209ENST00000491162 CLEC11AQ9Y240 323 aa14.98□□□□□ -0.01
CLCN2-209ENST00000491162 TRPM7Q96QT4 1865 aa14.97□□□□□ -0.01
CLCN2-209ENST00000491162 ABCC4O15439 1325 aa14.97□□□□□ -0.01
CLCN2-209ENST00000491162 MYBBP1AQ9BQG0 1328 aaKnown RBP14.97□□□□□ -0.01
CLCN2-209ENST00000491162 RBM17Q96I25 401 aaKnown RBP14.97□□□□□ -0.01
CLCN2-209ENST00000491162 CRAMP1Q96RY5 1269 aa14.97□□□□□ -0.01
CLCN2-209ENST00000491162 DUOX1Q9NRD9 1551 aa14.97□□□□□ -0.01
CLCN2-209ENST00000491162 CNTNAP1P78357 1384 aa14.97□□□□□ -0.01
CLCN2-209ENST00000491162 LRRC37AA6NMS7 1700 aa14.96□□□□□ -0.01
CLCN2-209ENST00000491162 EPS15P42566 896 aa14.96□□□□□ -0.01
CLCN2-209ENST00000491162 SCNN1DP51172 638 aa14.96□□□□□ -0.01
CLCN2-209ENST00000491162 AOC3Q16853 763 aa14.96□□□□□ -0.01
CLCN2-209ENST00000491162 PPP1R42Q7Z4L9 355 aa14.96□□□□□ -0.01
CLCN2-209ENST00000491162 NLRP10Q86W26 655 aa14.96□□□□□ -0.01
CLCN2-209ENST00000491162 UTP14AQ9BVJ6 771 aaKnown RBP14.96□□□□□ -0.01
CLCN2-209ENST00000491162 CHPF2Q9P2E5 772 aa14.96□□□□□ -0.01
CLCN2-209ENST00000491162 CHL1O00533 1208 aa14.95□□□□□ -0.02
CLCN2-209ENST00000491162 PARP10Q53GL7 1025 aa14.95□□□□□ -0.02
CLCN2-209ENST00000491162 TNS4Q8IZW8 715 aa14.95□□□□□ -0.02
CLCN2-209ENST00000491162 GPC2Q8N158 579 aa14.95□□□□□ -0.02
CLCN2-209ENST00000491162 LARGE2Q8N3Y3 721 aa14.95□□□□□ -0.02
CLCN2-209ENST00000491162 JDP2Q8WYK2 163 aa14.95□□□□□ -0.02
CLCN2-209ENST00000491162 ADAMTS8Q9UP79 889 aa14.95□□□□□ -0.02
CLCN2-209ENST00000491162 VEGFBP49765 207 aa14.94□□□□□ -0.02
CLCN2-209ENST00000491162 SLC10A5Q5PT55 438 aa14.94□□□□□ -0.02
CLCN2-209ENST00000491162 CNTROBQ8N137 903 aa14.94□□□□□ -0.02
CLCN2-209ENST00000491162 NLRP3Q96P20 1036 aa14.94□□□□□ -0.02
CLCN2-209ENST00000491162 FOXN1O15353 648 aa14.93□□□□□ -0.02
CLCN2-209ENST00000491162 PPIP5K2O43314 1243 aa14.93□□□□□ -0.02
CLCN2-209ENST00000491162 EIF6P56537 245 aaKnown RBP14.93□□□□□ -0.02
CLCN2-209ENST00000491162 LMOD3Q0VAK6 560 aa14.93□□□□□ -0.02
CLCN2-209ENST00000491162 RUNDC1Q96C34 613 aa14.93□□□□□ -0.02
CLCN2-209ENST00000491162 ATP6V0A2Q9Y487 856 aa14.93□□□□□ -0.02
CLCN2-209ENST00000491162 TMEM88BA6NKF7 163 aa14.92□□□□□ -0.02
CLCN2-209ENST00000491162 ATP5J2-PTCD1G3V325 749 aa14.92□□□□□ -0.02
CLCN2-209ENST00000491162 TCIRG1Q13488 830 aa14.92□□□□□ -0.02
CLCN2-209ENST00000491162 RTL5Q5HYW3 569 aaPredicted RBP14.92□□□□□ -0.02
CLCN2-209ENST00000491162 CC2D2BQ6DHV5 1058 aa14.92□□□□□ -0.02
CLCN2-209ENST00000491162 DDX21Q9NR30 783 aaKnown RBP eCLIP14.92□□□□□ -0.02
CLCN2-209ENST00000491162 BABAM1Q9NWV8 329 aa14.92□□□□□ -0.02
CLCN2-209ENST00000491162 TRMT112Q9UI30 125 aaKnown RBP14.92□□□□□ -0.02
CLCN2-209ENST00000491162 SHTN1A0MZ66 631 aa14.91□□□□□ -0.02
CLCN2-209ENST00000491162 TRAF5O00463 557 aa14.91□□□□□ -0.02
CLCN2-209ENST00000491162 WDR43Q15061 677 aaKnown RBP eCLIP14.91□□□□□ -0.02
CLCN2-209ENST00000491162 HDGFL1Q5TGJ6 251 aa14.91□□□□□ -0.02
CLCN2-209ENST00000491162 NIM1KQ8IY84 436 aa14.91□□□□□ -0.02
CLCN2-209ENST00000491162 SPEF2Q9C093 1822 aa14.9□□□□□ -0.02
CLCN2-209ENST00000491162 CXCL9Q07325 125 aa14.9□□□□□ -0.02
CLCN2-209ENST00000491162 PNMA8AQ86V59 439 aaPredicted RBP14.9□□□□□ -0.02
CLCN2-209ENST00000491162 MBIPQ9NS73 344 aa14.9□□□□□ -0.02
CLCN2-209ENST00000491162 POLR2AP24928 1970 aaKnown RBP14.89□□□□□ -0.03
CLCN2-209ENST00000491162 SCN9AQ15858 1988 aa14.89□□□□□ -0.03
CLCN2-209ENST00000491162 THSD7BQ9C0I4 1608 aa14.89□□□□□ -0.03
CLCN2-209ENST00000491162 DUSP27Q5VZP5 1158 aa14.89□□□□□ -0.03
CLCN2-209ENST00000491162 FAM89AQ96GI7 184 aa14.89□□□□□ -0.03
CLCN2-209ENST00000491162 SH3TC1Q8TE82 1336 aa14.89□□□□□ -0.03
CLCN2-209ENST00000491162 YDJCA8MPS7 323 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms