RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 CCDC82Q8N4S0 544 aa14.96□□□□□ -0.01
SHOX2-205ENST00000490689 KIAA1524Q8TCG1 905 aa14.96□□□□□ -0.01
SHOX2-205ENST00000490689 PUS7Q96PZ0 661 aaKnown RBP14.96□□□□□ -0.01
SHOX2-205ENST00000490689 ZSCAN25Q6NSZ9 544 aa14.96□□□□□ -0.01
SHOX2-205ENST00000490689 RAD50Q92878 1312 aa14.96□□□□□ -0.01
SHOX2-205ENST00000490689 ATP10AO60312 1499 aa14.96□□□□□ -0.02
SHOX2-205ENST00000490689 PPFIBP1Q86W92 1011 aa14.95□□□□□ -0.02
SHOX2-205ENST00000490689 CAGE1Q8TC20 777 aa14.95□□□□□ -0.02
SHOX2-205ENST00000490689 IFNKQ9P0W0 207 aa14.95□□□□□ -0.02
SHOX2-205ENST00000490689 PDE4CQ08493 712 aa14.95□□□□□ -0.02
SHOX2-205ENST00000490689 FAM69CQ0P6D2 419 aa14.95□□□□□ -0.02
SHOX2-205ENST00000490689 RAPGEF4Q8WZA2 1011 aa14.95□□□□□ -0.02
SHOX2-205ENST00000490689 MTMR6Q9Y217 621 aa14.95□□□□□ -0.02
SHOX2-205ENST00000490689 NBPF7P0C2Y1 421 aaPredicted RBP14.95□□□□□ -0.02
SHOX2-205ENST00000490689 ME3Q16798 604 aa14.95□□□□□ -0.02
SHOX2-205ENST00000490689 CWF19L2Q2TBE0 894 aaKnown RBP14.95□□□□□ -0.02
SHOX2-205ENST00000490689 JMYQ8N9B5 988 aa14.95□□□□□ -0.02
SHOX2-205ENST00000490689 ANKRD20A12PQ8NF67 263 aa14.95□□□□□ -0.02
SHOX2-205ENST00000490689 CBFA2T2O43439 604 aa14.95□□□□□ -0.02
SHOX2-205ENST00000490689 DDIT3P35638 169 aa14.95□□□□□ -0.02
SHOX2-205ENST00000490689 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
SHOX2-205ENST00000490689 ACBD3Q9H3P7 528 aa14.95□□□□□ -0.02
SHOX2-205ENST00000490689 JAK2O60674 1132 aa14.94□□□□□ -0.02
SHOX2-205ENST00000490689 CASQ1P31415 396 aa14.94□□□□□ -0.02
SHOX2-205ENST00000490689 PTH1RQ03431 593 aa14.94□□□□□ -0.02
SHOX2-205ENST00000490689 MCM6Q14566 821 aa14.94□□□□□ -0.02
SHOX2-205ENST00000490689 LEO1Q8WVC0 666 aaPredicted RBP14.94□□□□□ -0.02
SHOX2-205ENST00000490689 CUL4AQ13619 759 aa14.94□□□□□ -0.02
SHOX2-205ENST00000490689 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
SHOX2-205ENST00000490689 NDUFB9Q9Y6M9 179 aa14.94□□□□□ -0.02
SHOX2-205ENST00000490689 POLR1AO95602 1720 aaPredicted RBP14.93□□□□□ -0.02
SHOX2-205ENST00000490689 A0A1B0GVL5 298 aa14.93□□□□□ -0.02
SHOX2-205ENST00000490689 MYD88Q99836 296 aa14.93□□□□□ -0.02
SHOX2-205ENST00000490689 CD109Q6YHK3 1445 aa14.93□□□□□ -0.02
SHOX2-205ENST00000490689 GOLIM4O00461 696 aa14.93□□□□□ -0.02
SHOX2-205ENST00000490689 NR1I2O75469 434 aa14.93□□□□□ -0.02
SHOX2-205ENST00000490689 MARCKSP29966 332 aaPredicted RBP14.93□□□□□ -0.02
SHOX2-205ENST00000490689 KIF4BQ2VIQ3 1234 aa14.93□□□□□ -0.02
SHOX2-205ENST00000490689 ADCK5Q3MIX3 580 aa14.93□□□□□ -0.02
SHOX2-205ENST00000490689 RBM33Q96EV2 1170 aaKnown RBP14.93□□□□□ -0.02
SHOX2-205ENST00000490689 SNRKQ9NRH2 765 aa14.93□□□□□ -0.02
SHOX2-205ENST00000490689 PIK3R4Q99570 1358 aa14.93□□□□□ -0.02
SHOX2-205ENST00000490689 ZSCAN12O43309 604 aa14.93□□□□□ -0.02
SHOX2-205ENST00000490689 CCDC70Q6NSX1 233 aa14.93□□□□□ -0.02
SHOX2-205ENST00000490689 PBRM1Q86U86 1689 aa14.93□□□□□ -0.02
SHOX2-205ENST00000490689 H0YHG0 523 aa14.92□□□□□ -0.02
SHOX2-205ENST00000490689 CAVIN2O95810 425 aa14.92□□□□□ -0.02
SHOX2-205ENST00000490689 CLEC17AQ6ZS10 378 aa14.92□□□□□ -0.02
SHOX2-205ENST00000490689 CCDC144CPQ8IYA2 1237 aa14.92□□□□□ -0.02
SHOX2-205ENST00000490689 TTC21BQ7Z4L5 1316 aa14.92□□□□□ -0.02
SHOX2-205ENST00000490689 TARBP1Q13395 1621 aaKnown RBP14.92□□□□□ -0.02
SHOX2-205ENST00000490689 UBASH3AP57075 661 aa14.92□□□□□ -0.02
SHOX2-205ENST00000490689 OSCARQ8IYS5 282 aa14.92□□□□□ -0.02
SHOX2-205ENST00000490689 KLHDC4Q8TBB5 520 aa14.92□□□□□ -0.02
SHOX2-205ENST00000490689 DBF4Q9UBU7 674 aaPredicted RBP14.92□□□□□ -0.02
SHOX2-205ENST00000490689 LARGE1O95461 756 aa14.92□□□□□ -0.02
SHOX2-205ENST00000490689 CYP2E1P05181 493 aaPredicted RBP14.92□□□□□ -0.02
SHOX2-205ENST00000490689 ERCC6LQ2NKX8 1250 aa14.92□□□□□ -0.02
SHOX2-205ENST00000490689 ZSCAN16Q9H4T2 348 aaPredicted RBP14.92□□□□□ -0.02
SHOX2-205ENST00000490689 SETQ01105 290 aaPredicted RBP14.91□□□□□ -0.02
SHOX2-205ENST00000490689 APOBRQ0VD83 1088 aa14.91□□□□□ -0.02
SHOX2-205ENST00000490689 TRIM34Q9BYJ4 488 aa14.91□□□□□ -0.02
SHOX2-205ENST00000490689 ATP5J2-PTCD1G3V325 749 aa14.91□□□□□ -0.02
SHOX2-205ENST00000490689 PTCD1O75127 700 aaKnown RBP14.91□□□□□ -0.02
SHOX2-205ENST00000490689 ERLIN1O75477 346 aa14.91□□□□□ -0.02
SHOX2-205ENST00000490689 NAP1L1P55209 391 aaKnown RBP14.91□□□□□ -0.02
SHOX2-205ENST00000490689 FILIP1LQ4L180 1135 aa14.91□□□□□ -0.02
SHOX2-205ENST00000490689 RUFY1Q96T51 708 aa14.91□□□□□ -0.02
SHOX2-205ENST00000490689 CLSTN2Q9H4D0 955 aa14.91□□□□□ -0.02
SHOX2-205ENST00000490689 ORC3Q9UBD5 711 aaPredicted RBP14.91□□□□□ -0.02
SHOX2-205ENST00000490689 U3KPZ7 1027 aaPredicted RBP14.91□□□□□ -0.02
SHOX2-205ENST00000490689 GOLGA8BA8MQT2 603 aa14.91□□□□□ -0.02
SHOX2-205ENST00000490689 PIP4K2AP48426 406 aaPredicted RBP14.91□□□□□ -0.02
SHOX2-205ENST00000490689 JAKMIP3Q5VZ66 844 aa14.91□□□□□ -0.02
SHOX2-205ENST00000490689 EYA1Q99502 592 aa14.91□□□□□ -0.02
SHOX2-205ENST00000490689 NLRP1Q9C000 1473 aa14.9□□□□□ -0.02
SHOX2-205ENST00000490689 EIF3JO75822 258 aaKnown RBP14.9□□□□□ -0.02
SHOX2-205ENST00000490689 CCDC129Q6ZRS4 1044 aa14.9□□□□□ -0.02
SHOX2-205ENST00000490689 CCDC12Q8WUD4 166 aaPredicted RBP14.9□□□□□ -0.02
SHOX2-205ENST00000490689 CACTINQ8WUQ7 758 aaKnown RBP14.9□□□□□ -0.02
SHOX2-205ENST00000490689 MRPS27Q92552 414 aaKnown RBP14.9□□□□□ -0.02
SHOX2-205ENST00000490689 ERO1AQ96HE7 468 aa14.9□□□□□ -0.02
SHOX2-205ENST00000490689 USP44Q9H0E7 712 aa14.9□□□□□ -0.02
SHOX2-205ENST00000490689 PHACTR2O75167 634 aa14.9□□□□□ -0.02
SHOX2-205ENST00000490689 ESCO1Q5FWF5 840 aa14.9□□□□□ -0.02
SHOX2-205ENST00000490689 C10orf67Q8IYJ2 551 aa14.9□□□□□ -0.02
SHOX2-205ENST00000490689 EDC3Q96F86 508 aaKnown RBP14.9□□□□□ -0.02
SHOX2-205ENST00000490689 TPCN1Q9ULQ1 816 aa14.9□□□□□ -0.02
SHOX2-205ENST00000490689 MTMR7Q9Y216 660 aa14.9□□□□□ -0.02
SHOX2-205ENST00000490689 OTUD7BQ6GQQ9 843 aa14.9□□□□□ -0.02
SHOX2-205ENST00000490689 NCOA5Q9HCD5 579 aaKnown RBP14.9□□□□□ -0.02
SHOX2-205ENST00000490689 SBNO2Q9Y2G9 1366 aa14.9□□□□□ -0.02
SHOX2-205ENST00000490689 SAMD9LQ8IVG5 1584 aa14.9□□□□□ -0.02
SHOX2-205ENST00000490689 TTC39AQ5SRH9 613 aa14.89□□□□□ -0.03
SHOX2-205ENST00000490689 UTP14AQ9BVJ6 771 aaKnown RBP14.89□□□□□ -0.03
SHOX2-205ENST00000490689 AK9Q5TCS8 1911 aa14.89□□□□□ -0.03
SHOX2-205ENST00000490689 ERICH2A1L162 156 aa14.89□□□□□ -0.03
SHOX2-205ENST00000490689 PATL2C9JE40 543 aaKnown RBP14.89□□□□□ -0.03
SHOX2-205ENST00000490689 SLC27A2O14975 620 aa14.89□□□□□ -0.03
SHOX2-205ENST00000490689 DHX37Q8IY37 1157 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms