RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 GIGYF2Q6Y7W6 1299 aaKnown RBP20.57■□□□□ 0.88
COL2A1-207ENST00000490609 LDHDQ86WU2 507 aa20.57■□□□□ 0.88
COL2A1-207ENST00000490609 NYXQ9GZU5 481 aa20.57■□□□□ 0.88
COL2A1-207ENST00000490609 IQCA1LA6NCM1 817 aa20.56■□□□□ 0.88
COL2A1-207ENST00000490609 MKRN1Q9UHC7 482 aaKnown RBP20.56■□□□□ 0.88
COL2A1-207ENST00000490609 ANXA1P04083 346 aa20.55■□□□□ 0.88
COL2A1-207ENST00000490609 GTF2E1P29083 439 aaPredicted RBP20.55■□□□□ 0.88
COL2A1-207ENST00000490609 ERBB4Q15303 1308 aa20.54■□□□□ 0.88
COL2A1-207ENST00000490609 RIPK4P57078 832 aa20.54■□□□□ 0.88
COL2A1-207ENST00000490609 KIF6Q6ZMV9 814 aa20.54■□□□□ 0.88
COL2A1-207ENST00000490609 RNF123Q5XPI4 1314 aa20.53■□□□□ 0.88
COL2A1-207ENST00000490609 EPHX2P34913 555 aa20.53■□□□□ 0.88
COL2A1-207ENST00000490609 TMPOP42166 694 aaKnown RBP20.53■□□□□ 0.88
COL2A1-207ENST00000490609 CRAMP1Q96RY5 1269 aa20.53■□□□□ 0.88
COL2A1-207ENST00000490609 TSPYL4Q9UJ04 414 aa20.53■□□□□ 0.88
COL2A1-207ENST00000490609 HACL1Q9UJ83 578 aa20.53■□□□□ 0.88
COL2A1-207ENST00000490609 CNTNAP1P78357 1384 aa20.53■□□□□ 0.88
COL2A1-207ENST00000490609 NEFMP07197 916 aa20.52■□□□□ 0.88
COL2A1-207ENST00000490609 SLC10A5Q5PT55 438 aa20.52■□□□□ 0.88
COL2A1-207ENST00000490609 GPC2Q8N158 579 aa20.52■□□□□ 0.88
COL2A1-207ENST00000490609 EIF2S2P20042 333 aaKnown RBP20.51■□□□□ 0.87
COL2A1-207ENST00000490609 KRT24Q2M2I5 525 aa20.51■□□□□ 0.87
COL2A1-207ENST00000490609 EAPPQ56P03 285 aaPredicted RBP20.51■□□□□ 0.87
COL2A1-207ENST00000490609 MAPK8IP3Q9UPT6 1336 aa20.51■□□□□ 0.87
COL2A1-207ENST00000490609 MAP1SQ66K74 1059 aaPredicted RBP20.5■□□□□ 0.87
COL2A1-207ENST00000490609 CC2D2BQ6DHV5 1058 aa20.5■□□□□ 0.87
COL2A1-207ENST00000490609 PNNQ9H307 717 aaKnown RBP20.5■□□□□ 0.87
COL2A1-207ENST00000490609 TCERG1O14776 1098 aaKnown RBP20.49■□□□□ 0.87
COL2A1-207ENST00000490609 VEGFBP49765 207 aa20.49■□□□□ 0.87
COL2A1-207ENST00000490609 SCNN1DP51172 638 aa20.49■□□□□ 0.87
COL2A1-207ENST00000490609 TNS4Q8IZW8 715 aa20.49■□□□□ 0.87
COL2A1-207ENST00000490609 RPGRQ92834 1020 aaKnown RBP20.49■□□□□ 0.87
COL2A1-207ENST00000490609 BABAM1Q9NWV8 329 aa20.49■□□□□ 0.87
COL2A1-207ENST00000490609 TRIM35Q9UPQ4 493 aa20.49■□□□□ 0.87
COL2A1-207ENST00000490609 TRPM7Q96QT4 1865 aa20.49■□□□□ 0.87
COL2A1-207ENST00000490609 DDX60Q8IY21 1712 aaKnown RBP20.48■□□□□ 0.87
COL2A1-207ENST00000490609 PPEF1O14829 653 aaPredicted RBP20.48■□□□□ 0.87
COL2A1-207ENST00000490609 FMR1Q06787 632 aaKnown RBP eCLIP20.48■□□□□ 0.87
COL2A1-207ENST00000490609 RALBP1Q15311 655 aa20.48■□□□□ 0.87
COL2A1-207ENST00000490609 CNTROBQ8N137 903 aa20.48■□□□□ 0.87
COL2A1-207ENST00000490609 RBM17Q96I25 401 aaKnown RBP20.48■□□□□ 0.87
COL2A1-207ENST00000490609 TMEM88BA6NKF7 163 aa20.47■□□□□ 0.87
COL2A1-207ENST00000490609 CHL1O00533 1208 aa20.47■□□□□ 0.87
COL2A1-207ENST00000490609 FOXN1O15353 648 aa20.47■□□□□ 0.87
COL2A1-207ENST00000490609 EPS15P42566 896 aa20.47■□□□□ 0.87
COL2A1-207ENST00000490609 PARP10Q53GL7 1025 aa20.47■□□□□ 0.87
COL2A1-207ENST00000490609 COPS6Q7L5N1 327 aa20.47■□□□□ 0.87
COL2A1-207ENST00000490609 NECTIN2Q92692 538 aa20.47■□□□□ 0.87
COL2A1-207ENST00000490609 COL4A1P02462 1669 aa20.47■□□□□ 0.87
COL2A1-207ENST00000490609 ABCC4O15439 1325 aa20.47■□□□□ 0.87
COL2A1-207ENST00000490609 PPP1R42Q7Z4L9 355 aa20.46■□□□□ 0.87
COL2A1-207ENST00000490609 PNMA8AQ86V59 439 aaPredicted RBP20.46■□□□□ 0.87
COL2A1-207ENST00000490609 NLRP10Q86W26 655 aa20.46■□□□□ 0.87
COL2A1-207ENST00000490609 CCDC146Q8IYE0 955 aa20.46■□□□□ 0.87
COL2A1-207ENST00000490609 XAGE3Q8WTP9 111 aa20.46■□□□□ 0.87
COL2A1-207ENST00000490609 JDP2Q8WYK2 163 aa20.46■□□□□ 0.87
COL2A1-207ENST00000490609 UTP14AQ9BVJ6 771 aaKnown RBP20.46■□□□□ 0.87
COL2A1-207ENST00000490609 CLEC11AQ9Y240 323 aa20.46■□□□□ 0.87
COL2A1-207ENST00000490609 ATP6V0A2Q9Y487 856 aa20.46■□□□□ 0.87
COL2A1-207ENST00000490609 NLRP3Q96P20 1036 aa20.45■□□□□ 0.86
COL2A1-207ENST00000490609 GJA3Q9Y6H8 435 aa20.45■□□□□ 0.86
COL2A1-207ENST00000490609 CAPN15O75808 1086 aa20.44■□□□□ 0.86
COL2A1-207ENST00000490609 HCLS1P14317 486 aaPredicted RBP20.44■□□□□ 0.86
COL2A1-207ENST00000490609 GRIPAP1Q4V328 841 aa20.44■□□□□ 0.86
COL2A1-207ENST00000490609 LARGE2Q8N3Y3 721 aa20.44■□□□□ 0.86
COL2A1-207ENST00000490609 RTFDC1Q9BY42 306 aaPredicted RBP20.44■□□□□ 0.86
COL2A1-207ENST00000490609 DUOX1Q9NRD9 1551 aa20.43■□□□□ 0.86
COL2A1-207ENST00000490609 RASSF10A6NK89 507 aa20.43■□□□□ 0.86
COL2A1-207ENST00000490609 AIMP1Q12904 312 aaKnown RBP20.43■□□□□ 0.86
COL2A1-207ENST00000490609 TCIRG1Q13488 830 aa20.43■□□□□ 0.86
COL2A1-207ENST00000490609 AOC3Q16853 763 aa20.43■□□□□ 0.86
COL2A1-207ENST00000490609 POLR2AP24928 1970 aaKnown RBP20.43■□□□□ 0.86
COL2A1-207ENST00000490609 LRRC37AA6NMS7 1700 aa20.42■□□□□ 0.86
COL2A1-207ENST00000490609 EIF6P56537 245 aaKnown RBP20.42■□□□□ 0.86
COL2A1-207ENST00000490609 DDX10Q13206 875 aaKnown RBP20.42■□□□□ 0.86
COL2A1-207ENST00000490609 NEUROD2Q15784 382 aa20.42■□□□□ 0.86
COL2A1-207ENST00000490609 ZNF428Q96B54 188 aa20.42■□□□□ 0.86
COL2A1-207ENST00000490609 DDX21Q9NR30 783 aaKnown RBP eCLIP20.42■□□□□ 0.86
COL2A1-207ENST00000490609 CXCL9Q07325 125 aa20.41■□□□□ 0.86
COL2A1-207ENST00000490609 WBP1LQ9NX94 342 aa20.41■□□□□ 0.86
COL2A1-207ENST00000490609 CST9Q5W186 159 aa20.4■□□□□ 0.86
COL2A1-207ENST00000490609 SP8Q8IXZ3 490 aa20.4■□□□□ 0.86
COL2A1-207ENST00000490609 MYBBP1AQ9BQG0 1328 aaKnown RBP20.4■□□□□ 0.86
COL2A1-207ENST00000490609 CHPF2Q9P2E5 772 aa20.4■□□□□ 0.86
COL2A1-207ENST00000490609 ADAMTS8Q9UP79 889 aa20.4■□□□□ 0.86
COL2A1-207ENST00000490609 THSD7BQ9C0I4 1608 aa20.39■□□□□ 0.86
COL2A1-207ENST00000490609 PPIP5K2O43314 1243 aa20.39■□□□□ 0.85
COL2A1-207ENST00000490609 TRAF5O00463 557 aa20.38■□□□□ 0.85
COL2A1-207ENST00000490609 BBOX1O75936 387 aa20.38■□□□□ 0.85
COL2A1-207ENST00000490609 LMOD3Q0VAK6 560 aa20.38■□□□□ 0.85
COL2A1-207ENST00000490609 DEFB115Q30KQ5 88 aa20.38■□□□□ 0.85
COL2A1-207ENST00000490609 NIM1KQ8IY84 436 aa20.38■□□□□ 0.85
COL2A1-207ENST00000490609 RUNDC1Q96C34 613 aa20.38■□□□□ 0.85
COL2A1-207ENST00000490609 VPS33BQ9H267 617 aa20.38■□□□□ 0.85
COL2A1-207ENST00000490609 GPRC5DQ9NZD1 345 aa20.38■□□□□ 0.85
COL2A1-207ENST00000490609 USP50Q70EL3 339 aaPredicted RBP20.37■□□□□ 0.85
COL2A1-207ENST00000490609 ISCA1Q9BUE6 129 aa20.37■□□□□ 0.85
COL2A1-207ENST00000490609 TRMT112Q9UI30 125 aaKnown RBP20.37■□□□□ 0.85
COL2A1-207ENST00000490609 ZNRF3Q9ULT6 936 aa20.37■□□□□ 0.85
COL2A1-207ENST00000490609 WDR33Q9C0J8 1336 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms