RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 RBM17Q96I25 401 aaKnown RBP15.52■□□□□ 0.08
FDPS-215ENST00000490140 ABCC12Q96J65 1359 aa15.51■□□□□ 0.07
FDPS-215ENST00000490140 RNF123Q5XPI4 1314 aa15.51■□□□□ 0.07
FDPS-215ENST00000490140 EIF4A1P60842 406 aaKnown RBP15.51■□□□□ 0.07
FDPS-215ENST00000490140 MIS18AQ9NYP9 233 aa15.51■□□□□ 0.07
FDPS-215ENST00000490140 RRP7AQ9Y3A4 280 aaKnown RBP15.51■□□□□ 0.07
FDPS-215ENST00000490140 MYL6BP14649 208 aa15.5■□□□□ 0.07
FDPS-215ENST00000490140 HOXA10P31260 410 aaPredicted RBP15.5■□□□□ 0.07
FDPS-215ENST00000490140 LMOD3Q0VAK6 560 aa15.5■□□□□ 0.07
FDPS-215ENST00000490140 NUTM1Q86Y26 1132 aa15.5■□□□□ 0.07
FDPS-215ENST00000490140 ADAMTSL1Q8N6G6 1762 aa15.49■□□□□ 0.07
FDPS-215ENST00000490140 PPEF1O14829 653 aaPredicted RBP15.49■□□□□ 0.07
FDPS-215ENST00000490140 GPTP24298 496 aa15.49■□□□□ 0.07
FDPS-215ENST00000490140 GIGYF2Q6Y7W6 1299 aaKnown RBP15.49■□□□□ 0.07
FDPS-215ENST00000490140 LARGE2Q8N3Y3 721 aa15.49■□□□□ 0.07
FDPS-215ENST00000490140 CRAMP1Q96RY5 1269 aa15.49■□□□□ 0.07
FDPS-215ENST00000490140 ZBTB3Q9H5J0 574 aa15.49■□□□□ 0.07
FDPS-215ENST00000490140 TSPYL4Q9UJ04 414 aa15.49■□□□□ 0.07
FDPS-215ENST00000490140 CTCFP49711 727 aaPredicted RBP15.48■□□□□ 0.07
FDPS-215ENST00000490140 OLFM4Q6UX06 510 aa15.48■□□□□ 0.07
FDPS-215ENST00000490140 CNTROBQ8N137 903 aa15.48■□□□□ 0.07
FDPS-215ENST00000490140 VPS33BQ9H267 617 aa15.48■□□□□ 0.07
FDPS-215ENST00000490140 PRDM10Q9NQV6 1147 aa15.48■□□□□ 0.07
FDPS-215ENST00000490140 BABAM1Q9NWV8 329 aa15.48■□□□□ 0.07
FDPS-215ENST00000490140 SNED1Q8TER0 1413 aa15.48■□□□□ 0.07
FDPS-215ENST00000490140 UBN2Q6ZU65 1347 aa15.47■□□□□ 0.07
FDPS-215ENST00000490140 ITGBL1O95965 494 aaPredicted RBP15.47■□□□□ 0.07
FDPS-215ENST00000490140 HSP90AB3PQ58FF7 597 aa15.47■□□□□ 0.07
FDPS-215ENST00000490140 TTLL7Q6ZT98 887 aa15.47■□□□□ 0.07
FDPS-215ENST00000490140 NIM1KQ8IY84 436 aa15.47■□□□□ 0.07
FDPS-215ENST00000490140 SUPT20HQ8NEM7 779 aa15.47■□□□□ 0.07
FDPS-215ENST00000490140 NLRP3Q96P20 1036 aa15.47■□□□□ 0.07
FDPS-215ENST00000490140 PLEKHF1Q96S99 279 aa15.47■□□□□ 0.07
FDPS-215ENST00000490140 GJA3Q9Y6H8 435 aa15.47■□□□□ 0.07
FDPS-215ENST00000490140 RASSF10A6NK89 507 aa15.46■□□□□ 0.07
FDPS-215ENST00000490140 MAP2K1Q02750 393 aaPredicted RBP15.46■□□□□ 0.07
FDPS-215ENST00000490140 ZNF34Q8IZ26 560 aa15.46■□□□□ 0.07
FDPS-215ENST00000490140 ABT1Q9ULW3 272 aaKnown RBP15.46■□□□□ 0.07
FDPS-215ENST00000490140 NTSR2O95665 410 aa15.45■□□□□ 0.06
FDPS-215ENST00000490140 VEGFBP49765 207 aa15.45■□□□□ 0.06
FDPS-215ENST00000490140 DEFB115Q30KQ5 88 aa15.45■□□□□ 0.06
FDPS-215ENST00000490140 MAP1SQ66K74 1059 aaPredicted RBP15.45■□□□□ 0.06
FDPS-215ENST00000490140 USP50Q70EL3 339 aaPredicted RBP15.45■□□□□ 0.06
FDPS-215ENST00000490140 UTP14AQ9BVJ6 771 aaKnown RBP15.45■□□□□ 0.06
FDPS-215ENST00000490140 FOXN1O15353 648 aa15.44■□□□□ 0.06
FDPS-215ENST00000490140 PPIP5K2O43314 1243 aa15.44■□□□□ 0.06
FDPS-215ENST00000490140 ECE1P42892 770 aa15.44■□□□□ 0.06
FDPS-215ENST00000490140 SUSD4Q5VX71 490 aa15.44■□□□□ 0.06
FDPS-215ENST00000490140 THUMPD2Q9BTF0 503 aaKnown RBP15.44■□□□□ 0.06
FDPS-215ENST00000490140 ANKRD36CQ5JPF3 1778 aa15.44■□□□□ 0.06
FDPS-215ENST00000490140 RALBP1Q15311 655 aa15.43■□□□□ 0.06
FDPS-215ENST00000490140 BEGAINQ9BUH8 593 aa15.43■□□□□ 0.06
FDPS-215ENST00000490140 DDX21Q9NR30 783 aaKnown RBP eCLIP15.43■□□□□ 0.06
FDPS-215ENST00000490140 ATP6V0A2Q9Y487 856 aa15.43■□□□□ 0.06
FDPS-215ENST00000490140 CDHR2Q9BYE9 1310 aa15.43■□□□□ 0.06
FDPS-215ENST00000490140 EIF2S2P20042 333 aaKnown RBP15.42■□□□□ 0.06
FDPS-215ENST00000490140 RIPK4P57078 832 aa15.42■□□□□ 0.06
FDPS-215ENST00000490140 TMC4Q7Z404 712 aa15.42■□□□□ 0.06
FDPS-215ENST00000490140 BBOX1O75936 387 aa15.41■□□□□ 0.06
FDPS-215ENST00000490140 SCNN1DP51172 638 aa15.41■□□□□ 0.06
FDPS-215ENST00000490140 SLC10A5Q5PT55 438 aa15.41■□□□□ 0.06
FDPS-215ENST00000490140 DPP8Q6V1X1 898 aaPredicted RBP15.41■□□□□ 0.06
FDPS-215ENST00000490140 ADARB2Q9NS39 739 aaKnown RBP15.41■□□□□ 0.06
FDPS-215ENST00000490140 WBP1LQ9NX94 342 aa15.41■□□□□ 0.06
FDPS-215ENST00000490140 WDR33Q9C0J8 1336 aaKnown RBP15.41■□□□□ 0.06
FDPS-215ENST00000490140 TRPM7Q96QT4 1865 aa15.4■□□□□ 0.06
FDPS-215ENST00000490140 TCERG1O14776 1098 aaKnown RBP15.4■□□□□ 0.06
FDPS-215ENST00000490140 AOC3Q16853 763 aa15.4■□□□□ 0.06
FDPS-215ENST00000490140 PAXIP1Q6ZW49 1069 aaPredicted RBP15.4■□□□□ 0.06
FDPS-215ENST00000490140 DDX46Q7L014 1031 aaKnown RBP15.4■□□□□ 0.06
FDPS-215ENST00000490140 ZNRF3Q9ULT6 936 aa15.4■□□□□ 0.06
FDPS-215ENST00000490140 COL4A5P29400 1685 aa15.4■□□□□ 0.06
FDPS-215ENST00000490140 ABCC4O15439 1325 aa15.4■□□□□ 0.06
FDPS-215ENST00000490140 TNIP1Q15025 636 aa15.39■□□□□ 0.05
FDPS-215ENST00000490140 RTFDC1Q9BY42 306 aaPredicted RBP15.39■□□□□ 0.05
FDPS-215ENST00000490140 GPRC5DQ9NZD1 345 aa15.39■□□□□ 0.05
FDPS-215ENST00000490140 SH3TC1Q8TE82 1336 aa15.39■□□□□ 0.05
FDPS-215ENST00000490140 THSD7BQ9C0I4 1608 aa15.39■□□□□ 0.05
FDPS-215ENST00000490140 LTBP1Q14766 1721 aa15.38■□□□□ 0.05
FDPS-215ENST00000490140 TMPOP42166 694 aaKnown RBP15.38■□□□□ 0.05
FDPS-215ENST00000490140 EPS15P42566 896 aa15.38■□□□□ 0.05
FDPS-215ENST00000490140 SP8Q8IXZ3 490 aa15.38■□□□□ 0.05
FDPS-215ENST00000490140 MPNDQ8N594 471 aa15.38■□□□□ 0.05
FDPS-215ENST00000490140 TRMT112Q9UI30 125 aaKnown RBP15.38■□□□□ 0.05
FDPS-215ENST00000490140 HOXB7P09629 217 aa15.37■□□□□ 0.05
FDPS-215ENST00000490140 LBX1P52954 281 aa15.37■□□□□ 0.05
FDPS-215ENST00000490140 PDIA6Q15084 440 aa15.37■□□□□ 0.05
FDPS-215ENST00000490140 LRP10Q7Z4F1 713 aa15.37■□□□□ 0.05
FDPS-215ENST00000490140 NLRP10Q86W26 655 aa15.37■□□□□ 0.05
FDPS-215ENST00000490140 BCL2L13Q9BXK5 485 aa15.37■□□□□ 0.05
FDPS-215ENST00000490140 LAMB2P55268 1798 aa15.36■□□□□ 0.05
FDPS-215ENST00000490140 KIAA2012Q0VF49 1180 aa15.36■□□□□ 0.05
FDPS-215ENST00000490140 AIMP1Q12904 312 aaKnown RBP15.36■□□□□ 0.05
FDPS-215ENST00000490140 TCIRG1Q13488 830 aa15.36■□□□□ 0.05
FDPS-215ENST00000490140 GRAPQ13588 217 aa15.36■□□□□ 0.05
FDPS-215ENST00000490140 WDR43Q15061 677 aaKnown RBP eCLIP15.36■□□□□ 0.05
FDPS-215ENST00000490140 CIAPIN1Q6FI81 312 aa15.36■□□□□ 0.05
FDPS-215ENST00000490140 C3orf67Q6ZVT6 689 aa15.36■□□□□ 0.05
FDPS-215ENST00000490140 COPS6Q7L5N1 327 aa15.36■□□□□ 0.05
FDPS-215ENST00000490140 GRAPLQ8TC17 118 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms