RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 COL4A5P29400 1685 aa29.6■■■□□ 2.33
HOXA9-205ENST00000489695 LBX1P52954 281 aa29.59■■■□□ 2.33
HOXA9-205ENST00000489695 IBTKQ9P2D0 1353 aaPredicted RBP29.59■■■□□ 2.33
HOXA9-205ENST00000489695 EIF6P56537 245 aaKnown RBP29.58■■■□□ 2.33
HOXA9-205ENST00000489695 NGEFQ8N5V2 710 aa29.58■■■□□ 2.33
HOXA9-205ENST00000489695 PNISRQ8TF01 805 aaKnown RBP29.58■■■□□ 2.33
HOXA9-205ENST00000489695 WDR33Q9C0J8 1336 aaKnown RBP29.57■■■□□ 2.32
HOXA9-205ENST00000489695 TTLL7Q6ZT98 887 aa29.57■■■□□ 2.32
HOXA9-205ENST00000489695 RPGRQ92834 1020 aaKnown RBP29.57■■■□□ 2.32
HOXA9-205ENST00000489695 DDX21Q9NR30 783 aaKnown RBP eCLIP29.57■■■□□ 2.32
HOXA9-205ENST00000489695 UBN2Q6ZU65 1347 aa29.56■■■□□ 2.32
HOXA9-205ENST00000489695 GJA3Q9Y6H8 435 aa29.56■■■□□ 2.32
HOXA9-205ENST00000489695 LTBP1Q14766 1721 aa29.55■■■□□ 2.32
HOXA9-205ENST00000489695 HSPA8P11142 646 aaKnown RBP29.55■■■□□ 2.32
HOXA9-205ENST00000489695 SCNN1DP51172 638 aa29.55■■■□□ 2.32
HOXA9-205ENST00000489695 EIF4A1P60842 406 aaKnown RBP29.55■■■□□ 2.32
HOXA9-205ENST00000489695 MAP2K1Q02750 393 aaPredicted RBP29.55■■■□□ 2.32
HOXA9-205ENST00000489695 KIF6Q6ZMV9 814 aa29.55■■■□□ 2.32
HOXA9-205ENST00000489695 CRAMP1Q96RY5 1269 aa29.55■■■□□ 2.32
HOXA9-205ENST00000489695 ABT1Q9ULW3 272 aaKnown RBP29.55■■■□□ 2.32
HOXA9-205ENST00000489695 LMOD1P29536 600 aaPredicted RBP29.54■■■□□ 2.32
HOXA9-205ENST00000489695 RRP7AQ9Y3A4 280 aaKnown RBP29.54■■■□□ 2.32
HOXA9-205ENST00000489695 NUP98P52948 1817 aa29.54■■■□□ 2.32
HOXA9-205ENST00000489695 EPS15P42566 896 aa29.53■■■□□ 2.32
HOXA9-205ENST00000489695 SUSD4Q5VX71 490 aa29.53■■■□□ 2.32
HOXA9-205ENST00000489695 ZNF34Q8IZ26 560 aa29.53■■■□□ 2.32
HOXA9-205ENST00000489695 LARGE2Q8N3Y3 721 aa29.53■■■□□ 2.32
HOXA9-205ENST00000489695 KDM3BQ7LBC6 1761 aa29.53■■■□□ 2.32
HOXA9-205ENST00000489695 GPTP24298 496 aa29.52■■■□□ 2.32
HOXA9-205ENST00000489695 RBM17Q96I25 401 aaKnown RBP29.52■■■□□ 2.32
HOXA9-205ENST00000489695 ZBTB3Q9H5J0 574 aa29.51■■■□□ 2.31
HOXA9-205ENST00000489695 NTSR2O95665 410 aa29.5■■■□□ 2.31
HOXA9-205ENST00000489695 MYL6BP14649 208 aa29.5■■■□□ 2.31
HOXA9-205ENST00000489695 USP50Q70EL3 339 aaPredicted RBP29.5■■■□□ 2.31
HOXA9-205ENST00000489695 SLC51AQ86UW1 340 aa29.5■■■□□ 2.31
HOXA9-205ENST00000489695 PPEF1O14829 653 aaPredicted RBP29.49■■■□□ 2.31
HOXA9-205ENST00000489695 PLEKHF1Q96S99 279 aa29.49■■■□□ 2.31
HOXA9-205ENST00000489695 NEFMP07197 916 aa29.48■■■□□ 2.31
HOXA9-205ENST00000489695 FMR1Q06787 632 aaKnown RBP eCLIP29.48■■■□□ 2.31
HOXA9-205ENST00000489695 GIGYF2Q6Y7W6 1299 aaKnown RBP29.48■■■□□ 2.31
HOXA9-205ENST00000489695 C3orf67Q6ZVT6 689 aa29.48■■■□□ 2.31
HOXA9-205ENST00000489695 THSD7BQ9C0I4 1608 aa29.47■■■□□ 2.31
HOXA9-205ENST00000489695 CST9Q5W186 159 aa29.47■■■□□ 2.31
HOXA9-205ENST00000489695 VPS33BQ9H267 617 aa29.47■■■□□ 2.31
HOXA9-205ENST00000489695 ERBB4Q15303 1308 aa29.46■■■□□ 2.31
HOXA9-205ENST00000489695 NIM1KQ8IY84 436 aa29.46■■■□□ 2.31
HOXA9-205ENST00000489695 ABHD8Q96I13 439 aa29.46■■■□□ 2.31
HOXA9-205ENST00000489695 CAPNS2Q96L46 248 aa29.46■■■□□ 2.31
HOXA9-205ENST00000489695 DLG5Q8TDM6 1919 aa29.45■■■□□ 2.31
HOXA9-205ENST00000489695 ECE1P42892 770 aa29.45■■■□□ 2.31
HOXA9-205ENST00000489695 NFE2L2Q16236 605 aa29.45■■■□□ 2.31
HOXA9-205ENST00000489695 PPP1R42Q7Z4L9 355 aa29.45■■■□□ 2.31
HOXA9-205ENST00000489695 THUMPD2Q9BTF0 503 aaKnown RBP29.45■■■□□ 2.31
HOXA9-205ENST00000489695 TCERG1O14776 1098 aaKnown RBP29.44■■■□□ 2.3
HOXA9-205ENST00000489695 PARP10Q53GL7 1025 aa29.44■■■□□ 2.3
HOXA9-205ENST00000489695 SLC10A5Q5PT55 438 aa29.44■■■□□ 2.3
HOXA9-205ENST00000489695 NLRP3Q96P20 1036 aa29.44■■■□□ 2.3
HOXA9-205ENST00000489695 ATP6V0A2Q9Y487 856 aa29.44■■■□□ 2.3
HOXA9-205ENST00000489695 TRAF5O00463 557 aa29.43■■■□□ 2.3
HOXA9-205ENST00000489695 PPIP5K2O43314 1243 aa29.43■■■□□ 2.3
HOXA9-205ENST00000489695 LRP10Q7Z4F1 713 aa29.43■■■□□ 2.3
HOXA9-205ENST00000489695 GPR101Q96P66 508 aaPredicted RBP29.43■■■□□ 2.3
HOXA9-205ENST00000489695 GPRC5DQ9NZD1 345 aa29.43■■■□□ 2.3
HOXA9-205ENST00000489695 TLL2Q9Y6L7 1015 aa29.43■■■□□ 2.3
HOXA9-205ENST00000489695 AOC3Q16853 763 aa29.42■■■□□ 2.3
HOXA9-205ENST00000489695 CYP4F22Q6NT55 531 aa29.42■■■□□ 2.3
HOXA9-205ENST00000489695 ADARB2Q9NS39 739 aaKnown RBP29.42■■■□□ 2.3
HOXA9-205ENST00000489695 RTFDC1Q9BY42 306 aaPredicted RBP29.41■■■□□ 2.3
HOXA9-205ENST00000489695 PDIA6Q15084 440 aa29.4■■■□□ 2.3
HOXA9-205ENST00000489695 TMX4Q9H1E5 349 aaPredicted RBP29.4■■■□□ 2.3
HOXA9-205ENST00000489695 ZNRF3Q9ULT6 936 aa29.4■■■□□ 2.3
HOXA9-205ENST00000489695 CXCL9Q07325 125 aa29.39■■■□□ 2.3
HOXA9-205ENST00000489695 PAXIP1Q6ZW49 1069 aaPredicted RBP29.39■■■□□ 2.3
HOXA9-205ENST00000489695 BEGAINQ9BUH8 593 aa29.39■■■□□ 2.3
HOXA9-205ENST00000489695 UTP14AQ9BVJ6 771 aaKnown RBP29.39■■■□□ 2.3
HOXA9-205ENST00000489695 SUPT20HQ8NEM7 779 aa29.38■■■□□ 2.29
HOXA9-205ENST00000489695 ABCC4O15439 1325 aa29.38■■■□□ 2.29
HOXA9-205ENST00000489695 MAP2K2P36507 400 aa29.37■■■□□ 2.29
HOXA9-205ENST00000489695 TRPM7Q96QT4 1865 aa29.37■■■□□ 2.29
HOXA9-205ENST00000489695 BBOX1O75936 387 aa29.36■■■□□ 2.29
HOXA9-205ENST00000489695 PGAP2Q9UHJ9 254 aa29.36■■■□□ 2.29
HOXA9-205ENST00000489695 GRM1Q13255 1194 aa29.35■■■□□ 2.29
HOXA9-205ENST00000489695 SAPCD2Q86UD0 394 aa29.35■■■□□ 2.29
HOXA9-205ENST00000489695 SP8Q8IXZ3 490 aa29.35■■■□□ 2.29
HOXA9-205ENST00000489695 PNNQ9H307 717 aaKnown RBP29.35■■■□□ 2.29
HOXA9-205ENST00000489695 GMPSP49915 693 aaPredicted RBP29.34■■■□□ 2.29
HOXA9-205ENST00000489695 TSPYL4Q9UJ04 414 aa29.34■■■□□ 2.29
HOXA9-205ENST00000489695 CDHR2Q9BYE9 1310 aa29.34■■■□□ 2.29
HOXA9-205ENST00000489695 PROSER3Q2NL68 480 aa29.33■■■□□ 2.29
HOXA9-205ENST00000489695 HHIPL1Q96JK4 782 aa29.33■■■□□ 2.29
HOXA9-205ENST00000489695 MAPK8IP3Q9UPT6 1336 aa29.32■■■□□ 2.28
HOXA9-205ENST00000489695 AOC2O75106 756 aa29.32■■■□□ 2.28
HOXA9-205ENST00000489695 KIAA2012Q0VF49 1180 aa29.32■■■□□ 2.28
HOXA9-205ENST00000489695 DPP8Q6V1X1 898 aaPredicted RBP29.32■■■□□ 2.28
HOXA9-205ENST00000489695 CELF2O95319 508 aaKnown RBP29.31■■■□□ 2.28
HOXA9-205ENST00000489695 EIF2S2P20042 333 aaKnown RBP29.31■■■□□ 2.28
HOXA9-205ENST00000489695 FAM161AQ3B820 660 aa29.31■■■□□ 2.28
HOXA9-205ENST00000489695 CIAPIN1Q6FI81 312 aa29.31■■■□□ 2.28
HOXA9-205ENST00000489695 MPNDQ8N594 471 aa29.31■■■□□ 2.28
HOXA9-205ENST00000489695 ZC3H15Q8WU90 426 aaKnown RBP29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms