RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 RBM17Q96I25 401 aaKnown RBP15.7■□□□□ 0.1
SFXN3-207ENST00000489434 THUMPD2Q9BTF0 503 aaKnown RBP15.7■□□□□ 0.1
SFXN3-207ENST00000489434 ZBTB3Q9H5J0 574 aa15.7■□□□□ 0.1
SFXN3-207ENST00000489434 PASKQ96RG2 1323 aa15.69■□□□□ 0.1
SFXN3-207ENST00000489434 TMEM88BA6NKF7 163 aa15.69■□□□□ 0.1
SFXN3-207ENST00000489434 FZD9O00144 591 aa15.69■□□□□ 0.1
SFXN3-207ENST00000489434 HOXA10P31260 410 aaPredicted RBP15.69■□□□□ 0.1
SFXN3-207ENST00000489434 PPP1R42Q7Z4L9 355 aa15.69■□□□□ 0.1
SFXN3-207ENST00000489434 TSPYL4Q9UJ04 414 aa15.69■□□□□ 0.1
SFXN3-207ENST00000489434 ABCC12Q96J65 1359 aa15.69■□□□□ 0.1
SFXN3-207ENST00000489434 RIC1Q4ADV7 1423 aa15.68■□□□□ 0.1
SFXN3-207ENST00000489434 CNTNAP1P78357 1384 aa15.68■□□□□ 0.1
SFXN3-207ENST00000489434 LMOD1P29536 600 aaPredicted RBP15.68■□□□□ 0.1
SFXN3-207ENST00000489434 PARP10Q53GL7 1025 aa15.68■□□□□ 0.1
SFXN3-207ENST00000489434 CRAMP1Q96RY5 1269 aa15.68■□□□□ 0.1
SFXN3-207ENST00000489434 RNF123Q5XPI4 1314 aa15.68■□□□□ 0.1
SFXN3-207ENST00000489434 ITGBL1O95965 494 aaPredicted RBP15.67■□□□□ 0.1
SFXN3-207ENST00000489434 LMOD3Q0VAK6 560 aa15.67■□□□□ 0.1
SFXN3-207ENST00000489434 SUSD4Q5VX71 490 aa15.67■□□□□ 0.1
SFXN3-207ENST00000489434 GIGYF2Q6Y7W6 1299 aaKnown RBP15.67■□□□□ 0.1
SFXN3-207ENST00000489434 ZNF34Q8IZ26 560 aa15.67■□□□□ 0.1
SFXN3-207ENST00000489434 LARGE2Q8N3Y3 721 aa15.67■□□□□ 0.1
SFXN3-207ENST00000489434 AIDAQ96BJ3 306 aa15.67■□□□□ 0.1
SFXN3-207ENST00000489434 GJA3Q9Y6H8 435 aa15.67■□□□□ 0.1
SFXN3-207ENST00000489434 UBN2Q6ZU65 1347 aa15.67■□□□□ 0.1
SFXN3-207ENST00000489434 PPEF1O14829 653 aaPredicted RBP15.66■□□□□ 0.1
SFXN3-207ENST00000489434 CNTROBQ8N137 903 aa15.66■□□□□ 0.1
SFXN3-207ENST00000489434 NLRP3Q96P20 1036 aa15.66■□□□□ 0.1
SFXN3-207ENST00000489434 BABAM1Q9NWV8 329 aa15.66■□□□□ 0.1
SFXN3-207ENST00000489434 EIF2S2P20042 333 aaKnown RBP15.65■□□□□ 0.1
SFXN3-207ENST00000489434 RIPK4P57078 832 aa15.65■□□□□ 0.1
SFXN3-207ENST00000489434 UTP14AQ9BVJ6 771 aaKnown RBP15.65■□□□□ 0.1
SFXN3-207ENST00000489434 TCERG1O14776 1098 aaKnown RBP15.64■□□□□ 0.09
SFXN3-207ENST00000489434 NTSR2O95665 410 aa15.64■□□□□ 0.09
SFXN3-207ENST00000489434 RALBP1Q15311 655 aa15.64■□□□□ 0.09
SFXN3-207ENST00000489434 MAP1SQ66K74 1059 aaPredicted RBP15.64■□□□□ 0.09
SFXN3-207ENST00000489434 NIM1KQ8IY84 436 aa15.64■□□□□ 0.09
SFXN3-207ENST00000489434 SNED1Q8TER0 1413 aa15.63■□□□□ 0.09
SFXN3-207ENST00000489434 VEGFBP49765 207 aa15.63■□□□□ 0.09
SFXN3-207ENST00000489434 HSP90AB3PQ58FF7 597 aa15.63■□□□□ 0.09
SFXN3-207ENST00000489434 PPIP5K2O43314 1243 aa15.62■□□□□ 0.09
SFXN3-207ENST00000489434 CTCFP49711 727 aaPredicted RBP15.62■□□□□ 0.09
SFXN3-207ENST00000489434 SLC10A5Q5PT55 438 aa15.62■□□□□ 0.09
SFXN3-207ENST00000489434 SUPT20HQ8NEM7 779 aa15.62■□□□□ 0.09
SFXN3-207ENST00000489434 VPS33BQ9H267 617 aa15.62■□□□□ 0.09
SFXN3-207ENST00000489434 ABT1Q9ULW3 272 aaKnown RBP15.62■□□□□ 0.09
SFXN3-207ENST00000489434 ATP6V0A2Q9Y487 856 aa15.62■□□□□ 0.09
SFXN3-207ENST00000489434 ADAMTSL1Q8N6G6 1762 aa15.62■□□□□ 0.09
SFXN3-207ENST00000489434 BBOX1O75936 387 aa15.61■□□□□ 0.09
SFXN3-207ENST00000489434 DEFB115Q30KQ5 88 aa15.61■□□□□ 0.09
SFXN3-207ENST00000489434 PRDM10Q9NQV6 1147 aa15.61■□□□□ 0.09
SFXN3-207ENST00000489434 RASSF10A6NK89 507 aa15.6■□□□□ 0.09
SFXN3-207ENST00000489434 FOXN1O15353 648 aa15.6■□□□□ 0.09
SFXN3-207ENST00000489434 TMPOP42166 694 aaKnown RBP15.6■□□□□ 0.09
SFXN3-207ENST00000489434 PDIA6Q15084 440 aa15.6■□□□□ 0.09
SFXN3-207ENST00000489434 C3orf67Q6ZVT6 689 aa15.6■□□□□ 0.09
SFXN3-207ENST00000489434 USP50Q70EL3 339 aaPredicted RBP15.6■□□□□ 0.09
SFXN3-207ENST00000489434 SCNN1DP51172 638 aa15.59■□□□□ 0.09
SFXN3-207ENST00000489434 AIMP1Q12904 312 aaKnown RBP15.59■□□□□ 0.09
SFXN3-207ENST00000489434 PROSER3Q2NL68 480 aa15.59■□□□□ 0.09
SFXN3-207ENST00000489434 DDX46Q7L014 1031 aaKnown RBP15.59■□□□□ 0.09
SFXN3-207ENST00000489434 COPS6Q7L5N1 327 aa15.59■□□□□ 0.09
SFXN3-207ENST00000489434 DDX21Q9NR30 783 aaKnown RBP eCLIP15.59■□□□□ 0.09
SFXN3-207ENST00000489434 ZNRF3Q9ULT6 936 aa15.59■□□□□ 0.09
SFXN3-207ENST00000489434 COL4A5P29400 1685 aa15.58■□□□□ 0.08
SFXN3-207ENST00000489434 ANXA1P04083 346 aa15.58■□□□□ 0.08
SFXN3-207ENST00000489434 EPS15P42566 896 aa15.58■□□□□ 0.08
SFXN3-207ENST00000489434 MAP2K1Q02750 393 aaPredicted RBP15.58■□□□□ 0.08
SFXN3-207ENST00000489434 AOC3Q16853 763 aa15.58■□□□□ 0.08
SFXN3-207ENST00000489434 DPP8Q6V1X1 898 aaPredicted RBP15.58■□□□□ 0.08
SFXN3-207ENST00000489434 LRP10Q7Z4F1 713 aa15.58■□□□□ 0.08
SFXN3-207ENST00000489434 XAGE3Q8WTP9 111 aa15.58■□□□□ 0.08
SFXN3-207ENST00000489434 NECTIN2Q92692 538 aa15.58■□□□□ 0.08
SFXN3-207ENST00000489434 WBP1LQ9NX94 342 aa15.58■□□□□ 0.08
SFXN3-207ENST00000489434 TRMT112Q9UI30 125 aaKnown RBP15.58■□□□□ 0.08
SFXN3-207ENST00000489434 ABCC4O15439 1325 aa15.58■□□□□ 0.08
SFXN3-207ENST00000489434 TCIRG1Q13488 830 aa15.57■□□□□ 0.08
SFXN3-207ENST00000489434 NEUROD2Q15784 382 aa15.57■□□□□ 0.08
SFXN3-207ENST00000489434 NLRP10Q86W26 655 aa15.57■□□□□ 0.08
SFXN3-207ENST00000489434 SP8Q8IXZ3 490 aa15.57■□□□□ 0.08
SFXN3-207ENST00000489434 MPNDQ8N594 471 aa15.57■□□□□ 0.08
SFXN3-207ENST00000489434 ADARB2Q9NS39 739 aaKnown RBP15.57■□□□□ 0.08
SFXN3-207ENST00000489434 SH3TC1Q8TE82 1336 aa15.57■□□□□ 0.08
SFXN3-207ENST00000489434 ANKRD36CQ5JPF3 1778 aa15.57■□□□□ 0.08
SFXN3-207ENST00000489434 HCLS1P14317 486 aaPredicted RBP15.56■□□□□ 0.08
SFXN3-207ENST00000489434 ECE1P42892 770 aa15.56■□□□□ 0.08
SFXN3-207ENST00000489434 WDR43Q15061 677 aaKnown RBP eCLIP15.56■□□□□ 0.08
SFXN3-207ENST00000489434 PAXIP1Q6ZW49 1069 aaPredicted RBP15.56■□□□□ 0.08
SFXN3-207ENST00000489434 TMC4Q7Z404 712 aa15.56■□□□□ 0.08
SFXN3-207ENST00000489434 BEGAINQ9BUH8 593 aa15.56■□□□□ 0.08
SFXN3-207ENST00000489434 RTFDC1Q9BY42 306 aaPredicted RBP15.56■□□□□ 0.08
SFXN3-207ENST00000489434 GPRC5DQ9NZD1 345 aa15.56■□□□□ 0.08
SFXN3-207ENST00000489434 LAS1LQ9Y4W2 734 aaKnown RBP15.56■□□□□ 0.08
SFXN3-207ENST00000489434 WDR33Q9C0J8 1336 aaKnown RBP15.56■□□□□ 0.08
SFXN3-207ENST00000489434 MYBBP1AQ9BQG0 1328 aaKnown RBP15.55■□□□□ 0.08
SFXN3-207ENST00000489434 CHL1O00533 1208 aa15.55■□□□□ 0.08
SFXN3-207ENST00000489434 CXCL9Q07325 125 aa15.55■□□□□ 0.08
SFXN3-207ENST00000489434 TNIP1Q15025 636 aa15.55■□□□□ 0.08
SFXN3-207ENST00000489434 BCL2L13Q9BXK5 485 aa15.55■□□□□ 0.08
SFXN3-207ENST00000489434 TRPM7Q96QT4 1865 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms