RNA–Protein interactions for RNA: ENST00000489113.2

GAPDHP47-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 47, humanhuman

BASIC

Gene GAPDHP47, Length 999 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP47-201ENST00000489113 CRY2Q49AN0 593 aa11.45□□□□□ -0.58
GAPDHP47-201ENST00000489113 IFFO2Q5TF58 517 aa11.45□□□□□ -0.58
GAPDHP47-201ENST00000489113 HDGFL1Q5TGJ6 251 aa11.45□□□□□ -0.58
GAPDHP47-201ENST00000489113 TRMT112Q9UI30 125 aaKnown RBP11.45□□□□□ -0.58
GAPDHP47-201ENST00000489113 UBN2Q6ZU65 1347 aa11.44□□□□□ -0.58
GAPDHP47-201ENST00000489113 POTECB2RU33 542 aa11.44□□□□□ -0.58
GAPDHP47-201ENST00000489113 CHL1O00533 1208 aa11.44□□□□□ -0.58
GAPDHP47-201ENST00000489113 HOXA10P31260 410 aaPredicted RBP11.44□□□□□ -0.58
GAPDHP47-201ENST00000489113 CALD1Q05682 793 aaKnown RBP11.44□□□□□ -0.58
GAPDHP47-201ENST00000489113 PDIA6Q15084 440 aa11.44□□□□□ -0.58
GAPDHP47-201ENST00000489113 PROSER3Q2NL68 480 aa11.44□□□□□ -0.58
GAPDHP47-201ENST00000489113 LARGE2Q8N3Y3 721 aa11.44□□□□□ -0.58
GAPDHP47-201ENST00000489113 CRAMP1Q96RY5 1269 aa11.44□□□□□ -0.58
GAPDHP47-201ENST00000489113 DDX21Q9NR30 783 aaKnown RBP eCLIP11.44□□□□□ -0.58
GAPDHP47-201ENST00000489113 HACL1Q9UJ83 578 aa11.44□□□□□ -0.58
GAPDHP47-201ENST00000489113 GJA3Q9Y6H8 435 aa11.44□□□□□ -0.58
GAPDHP47-201ENST00000489113 NRXN2Q9P2S2 1712 aa11.43□□□□□ -0.58
GAPDHP47-201ENST00000489113 NTSR2O95665 410 aa11.43□□□□□ -0.58
GAPDHP47-201ENST00000489113 LMOD1P29536 600 aaPredicted RBP11.43□□□□□ -0.58
GAPDHP47-201ENST00000489113 DDX46Q7L014 1031 aaKnown RBP11.43□□□□□ -0.58
GAPDHP47-201ENST00000489113 PNMA8AQ86V59 439 aaPredicted RBP11.43□□□□□ -0.58
GAPDHP47-201ENST00000489113 LDHDQ86WU2 507 aa11.43□□□□□ -0.58
GAPDHP47-201ENST00000489113 NIM1KQ8IY84 436 aa11.43□□□□□ -0.58
GAPDHP47-201ENST00000489113 PSMD1Q99460 953 aa11.43□□□□□ -0.58
GAPDHP47-201ENST00000489113 TAF1DQ9H5J8 278 aaPredicted RBP11.43□□□□□ -0.58
GAPDHP47-201ENST00000489113 PRKRIP1Q9H875 184 aaPredicted RBP11.43□□□□□ -0.58
GAPDHP47-201ENST00000489113 DBF4Q9UBU7 674 aaPredicted RBP11.43□□□□□ -0.58
GAPDHP47-201ENST00000489113 ABCC12Q96J65 1359 aa11.42□□□□□ -0.58
GAPDHP47-201ENST00000489113 BBOX1O75936 387 aa11.42□□□□□ -0.58
GAPDHP47-201ENST00000489113 HCLS1P14317 486 aaPredicted RBP11.42□□□□□ -0.58
GAPDHP47-201ENST00000489113 EPHX2P34913 555 aa11.42□□□□□ -0.58
GAPDHP47-201ENST00000489113 TCIRG1Q13488 830 aa11.42□□□□□ -0.58
GAPDHP47-201ENST00000489113 KRT24Q2M2I5 525 aa11.42□□□□□ -0.58
GAPDHP47-201ENST00000489113 SLC10A5Q5PT55 438 aa11.42□□□□□ -0.58
GAPDHP47-201ENST00000489113 ANKRD13DQ6ZTN6 518 aa11.42□□□□□ -0.58
GAPDHP47-201ENST00000489113 GPC2Q8N158 579 aa11.42□□□□□ -0.58
GAPDHP47-201ENST00000489113 SUPT20HQ8NEM7 779 aa11.42□□□□□ -0.58
GAPDHP47-201ENST00000489113 L3MBTL3Q96JM7 780 aaPredicted RBP11.42□□□□□ -0.58
GAPDHP47-201ENST00000489113 CFAP44Q96MT7 982 aa11.42□□□□□ -0.58
GAPDHP47-201ENST00000489113 CHPF2Q9P2E5 772 aa11.42□□□□□ -0.58
GAPDHP47-201ENST00000489113 TRIM35Q9UPQ4 493 aa11.42□□□□□ -0.58
GAPDHP47-201ENST00000489113 SCN7AQ01118 1682 aa11.42□□□□□ -0.58
GAPDHP47-201ENST00000489113 ARFGEF1Q9Y6D6 1849 aa11.42□□□□□ -0.58
GAPDHP47-201ENST00000489113 IBTKQ9P2D0 1353 aaPredicted RBP11.41□□□□□ -0.58
GAPDHP47-201ENST00000489113 RNF123Q5XPI4 1314 aa11.41□□□□□ -0.58
GAPDHP47-201ENST00000489113 SH3TC1Q8TE82 1336 aa11.41□□□□□ -0.58
GAPDHP47-201ENST00000489113 ZNF541Q9H0D2 1346 aa11.41□□□□□ -0.58
GAPDHP47-201ENST00000489113 FZD9O00144 591 aa11.41□□□□□ -0.58
GAPDHP47-201ENST00000489113 APAF1O14727 1248 aa11.41□□□□□ -0.58
GAPDHP47-201ENST00000489113 PPIP5K2O43314 1243 aa11.41□□□□□ -0.58
GAPDHP47-201ENST00000489113 HOXB7P09629 217 aa11.41□□□□□ -0.58
GAPDHP47-201ENST00000489113 DUSP27Q5VZP5 1158 aa11.41□□□□□ -0.58
GAPDHP47-201ENST00000489113 NLRP10Q86W26 655 aa11.41□□□□□ -0.58
GAPDHP47-201ENST00000489113 ZNF428Q96B54 188 aa11.41□□□□□ -0.58
GAPDHP47-201ENST00000489113 CHMP4AQ9BY43 222 aa11.41□□□□□ -0.58
GAPDHP47-201ENST00000489113 HYPKQ9NX55 129 aa11.41□□□□□ -0.58
GAPDHP47-201ENST00000489113 ATP6V0A2Q9Y487 856 aa11.41□□□□□ -0.58
GAPDHP47-201ENST00000489113 AFDNP55196 1824 aaKnown RBP11.4□□□□□ -0.58
GAPDHP47-201ENST00000489113 POTEIP0CG38 1075 aa11.4□□□□□ -0.58
GAPDHP47-201ENST00000489113 POTEJP0CG39 1038 aa11.4□□□□□ -0.58
GAPDHP47-201ENST00000489113 GNAI1P63096 354 aa11.4□□□□□ -0.58
GAPDHP47-201ENST00000489113 DPP8Q6V1X1 898 aaPredicted RBP11.4□□□□□ -0.58
GAPDHP47-201ENST00000489113 C3orf67Q6ZVT6 689 aa11.4□□□□□ -0.58
GAPDHP47-201ENST00000489113 LRP10Q7Z4F1 713 aa11.4□□□□□ -0.58
GAPDHP47-201ENST00000489113 RIC3Q7Z5B4 369 aa11.4□□□□□ -0.58
GAPDHP47-201ENST00000489113 JMYQ8N9B5 988 aa11.4□□□□□ -0.58
GAPDHP47-201ENST00000489113 PLBD2Q8NHP8 589 aa11.4□□□□□ -0.58
GAPDHP47-201ENST00000489113 CREBZFQ9NS37 354 aa11.4□□□□□ -0.58
GAPDHP47-201ENST00000489113 SIPA1L3O60292 1781 aaPredicted RBP11.4□□□□□ -0.58
GAPDHP47-201ENST00000489113 CEP350Q5VT06 3117 aa11.4□□□□□ -0.59
GAPDHP47-201ENST00000489113 ATP5J2-PTCD1G3V325 749 aa11.39□□□□□ -0.59
GAPDHP47-201ENST00000489113 ELL2O00472 640 aaPredicted RBP11.39□□□□□ -0.59
GAPDHP47-201ENST00000489113 BRCA1P38398 1863 aaKnown RBP11.39□□□□□ -0.59
GAPDHP47-201ENST00000489113 GOLGA2Q08379 1002 aa11.39□□□□□ -0.59
GAPDHP47-201ENST00000489113 MPNDQ8N594 471 aa11.39□□□□□ -0.59
GAPDHP47-201ENST00000489113 MBIPQ9NS73 344 aa11.39□□□□□ -0.59
GAPDHP47-201ENST00000489113 MKRN1Q9UHC7 482 aaKnown RBP11.39□□□□□ -0.59
GAPDHP47-201ENST00000489113 HSP90B1P14625 803 aaKnown RBP11.38□□□□□ -0.59
GAPDHP47-201ENST00000489113 AOC3Q16853 763 aa11.38□□□□□ -0.59
GAPDHP47-201ENST00000489113 RTL5Q5HYW3 569 aaPredicted RBP11.38□□□□□ -0.59
GAPDHP47-201ENST00000489113 SP8Q8IXZ3 490 aa11.38□□□□□ -0.59
GAPDHP47-201ENST00000489113 CNTROBQ8N137 903 aa11.38□□□□□ -0.59
GAPDHP47-201ENST00000489113 VPS33BQ9H267 617 aa11.38□□□□□ -0.59
GAPDHP47-201ENST00000489113 IFT57Q9NWB7 429 aa11.38□□□□□ -0.59
GAPDHP47-201ENST00000489113 ABCC4O15439 1325 aa11.37□□□□□ -0.59
GAPDHP47-201ENST00000489113 TMEM88BA6NKF7 163 aa11.37□□□□□ -0.59
GAPDHP47-201ENST00000489113 DDX58O95786 925 aaKnown RBP11.37□□□□□ -0.59
GAPDHP47-201ENST00000489113 ZEB1P37275 1124 aaPredicted RBP11.37□□□□□ -0.59
GAPDHP47-201ENST00000489113 GRAPQ13588 217 aa11.37□□□□□ -0.59
GAPDHP47-201ENST00000489113 MAP1SQ66K74 1059 aaPredicted RBP11.37□□□□□ -0.59
GAPDHP47-201ENST00000489113 TMC4Q7Z404 712 aa11.37□□□□□ -0.59
GAPDHP47-201ENST00000489113 GRAPLQ8TC17 118 aaPredicted RBP11.37□□□□□ -0.59
GAPDHP47-201ENST00000489113 FAM89AQ96GI7 184 aa11.37□□□□□ -0.59
GAPDHP47-201ENST00000489113 BCL2L13Q9BXK5 485 aa11.37□□□□□ -0.59
GAPDHP47-201ENST00000489113 ZNRF3Q9ULT6 936 aa11.37□□□□□ -0.59
GAPDHP47-201ENST00000489113 RIC1Q4ADV7 1423 aa11.36□□□□□ -0.59
GAPDHP47-201ENST00000489113 HSPA1AP0DMV8 641 aaKnown RBP11.36□□□□□ -0.59
GAPDHP47-201ENST00000489113 HSPA1BP0DMV9 641 aaKnown RBP11.36□□□□□ -0.59
GAPDHP47-201ENST00000489113 TNIP1Q15025 636 aa11.36□□□□□ -0.59
GAPDHP47-201ENST00000489113 ABT1Q9ULW3 272 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms