RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 PRKRIP1Q9H875 184 aaPredicted RBP23.92■■□□□ 1.42
ATG9A-222ENST00000488833 KRT24Q2M2I5 525 aa23.91■■□□□ 1.42
ATG9A-222ENST00000488833 KLRG1Q96E93 195 aa23.91■■□□□ 1.42
ATG9A-222ENST00000488833 HOXA10P31260 410 aaPredicted RBP23.9■■□□□ 1.42
ATG9A-222ENST00000488833 AIMP1Q12904 312 aaKnown RBP23.9■■□□□ 1.42
ATG9A-222ENST00000488833 SYNE4Q8N205 404 aa23.9■■□□□ 1.42
ATG9A-222ENST00000488833 XAGE3Q8WTP9 111 aa23.9■■□□□ 1.42
ATG9A-222ENST00000488833 SNED1Q8TER0 1413 aa23.9■■□□□ 1.42
ATG9A-222ENST00000488833 ZNF541Q9H0D2 1346 aa23.89■■□□□ 1.42
ATG9A-222ENST00000488833 IARSP41252 1262 aaKnown RBP23.89■■□□□ 1.41
ATG9A-222ENST00000488833 COPS6Q7L5N1 327 aa23.89■■□□□ 1.41
ATG9A-222ENST00000488833 RBM17Q96I25 401 aaKnown RBP23.89■■□□□ 1.41
ATG9A-222ENST00000488833 UTP14AQ9BVJ6 771 aaKnown RBP23.89■■□□□ 1.41
ATG9A-222ENST00000488833 CC2D2BQ6DHV5 1058 aa23.88■■□□□ 1.41
ATG9A-222ENST00000488833 C3orf67Q6ZVT6 689 aa23.88■■□□□ 1.41
ATG9A-222ENST00000488833 SCN4AP35499 1836 aa23.88■■□□□ 1.41
ATG9A-222ENST00000488833 IQCA1LA6NCM1 817 aa23.87■■□□□ 1.41
ATG9A-222ENST00000488833 HSP90AB3PQ58FF7 597 aa23.87■■□□□ 1.41
ATG9A-222ENST00000488833 L3MBTL3Q96JM7 780 aaPredicted RBP23.87■■□□□ 1.41
ATG9A-222ENST00000488833 PSMD1Q99460 953 aa23.87■■□□□ 1.41
ATG9A-222ENST00000488833 DDX21Q9NR30 783 aaKnown RBP eCLIP23.87■■□□□ 1.41
ATG9A-222ENST00000488833 PPEF1O14829 653 aaPredicted RBP23.86■■□□□ 1.41
ATG9A-222ENST00000488833 POTEIP0CG38 1075 aa23.86■■□□□ 1.41
ATG9A-222ENST00000488833 POTEJP0CG39 1038 aa23.86■■□□□ 1.41
ATG9A-222ENST00000488833 HDGFL1Q5TGJ6 251 aa23.86■■□□□ 1.41
ATG9A-222ENST00000488833 CHADLQ6NUI6 762 aa23.86■■□□□ 1.41
ATG9A-222ENST00000488833 NLRP3Q96P20 1036 aa23.86■■□□□ 1.41
ATG9A-222ENST00000488833 CRAMP1Q96RY5 1269 aa23.86■■□□□ 1.41
ATG9A-222ENST00000488833 CHPF2Q9P2E5 772 aa23.86■■□□□ 1.41
ATG9A-222ENST00000488833 TCERG1O14776 1098 aaKnown RBP23.85■■□□□ 1.41
ATG9A-222ENST00000488833 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
ATG9A-222ENST00000488833 LAMB2P55268 1798 aa23.84■■□□□ 1.41
ATG9A-222ENST00000488833 SLC51AQ86UW1 340 aa23.84■■□□□ 1.41
ATG9A-222ENST00000488833 NLRP10Q86W26 655 aa23.84■■□□□ 1.41
ATG9A-222ENST00000488833 HOXB7P09629 217 aa23.83■■□□□ 1.41
ATG9A-222ENST00000488833 JDP2Q8WYK2 163 aa23.83■■□□□ 1.41
ATG9A-222ENST00000488833 CFAP44Q96MT7 982 aa23.83■■□□□ 1.41
ATG9A-222ENST00000488833 TAF1DQ9H5J8 278 aaPredicted RBP23.83■■□□□ 1.41
ATG9A-222ENST00000488833 FZD9O00144 591 aa23.82■■□□□ 1.4
ATG9A-222ENST00000488833 TCIRG1Q13488 830 aa23.82■■□□□ 1.4
ATG9A-222ENST00000488833 GRIPAP1Q4V328 841 aa23.82■■□□□ 1.4
ATG9A-222ENST00000488833 SLC10A5Q5PT55 438 aa23.82■■□□□ 1.4
ATG9A-222ENST00000488833 JMYQ8N9B5 988 aa23.82■■□□□ 1.4
ATG9A-222ENST00000488833 COL4A5P29400 1685 aa23.82■■□□□ 1.4
ATG9A-222ENST00000488833 MBIPQ9NS73 344 aa23.81■■□□□ 1.4
ATG9A-222ENST00000488833 TRMT112Q9UI30 125 aaKnown RBP23.81■■□□□ 1.4
ATG9A-222ENST00000488833 HACL1Q9UJ83 578 aa23.81■■□□□ 1.4
ATG9A-222ENST00000488833 ABCC4O15439 1325 aa23.81■■□□□ 1.4
ATG9A-222ENST00000488833 APAF1O14727 1248 aa23.8■■□□□ 1.4
ATG9A-222ENST00000488833 HCLS1P14317 486 aaPredicted RBP23.8■■□□□ 1.4
ATG9A-222ENST00000488833 IFFO2Q5TF58 517 aa23.8■■□□□ 1.4
ATG9A-222ENST00000488833 LDHDQ86WU2 507 aa23.8■■□□□ 1.4
ATG9A-222ENST00000488833 TMX4Q9H1E5 349 aaPredicted RBP23.8■■□□□ 1.4
ATG9A-222ENST00000488833 EAPPQ56P03 285 aaPredicted RBP23.79■■□□□ 1.4
ATG9A-222ENST00000488833 DUSP27Q5VZP5 1158 aa23.79■■□□□ 1.4
ATG9A-222ENST00000488833 LARGE2Q8N3Y3 721 aa23.79■■□□□ 1.4
ATG9A-222ENST00000488833 DBF4Q9UBU7 674 aaPredicted RBP23.79■■□□□ 1.4
ATG9A-222ENST00000488833 SH3TC1Q8TE82 1336 aa23.79■■□□□ 1.4
ATG9A-222ENST00000488833 EIF6P56537 245 aaKnown RBP23.78■■□□□ 1.4
ATG9A-222ENST00000488833 GPC2Q8N158 579 aa23.78■■□□□ 1.4
ATG9A-222ENST00000488833 PLBD2Q8NHP8 589 aa23.78■■□□□ 1.4
ATG9A-222ENST00000488833 EPHX2P34913 555 aa23.77■■□□□ 1.4
ATG9A-222ENST00000488833 ZNF428Q96B54 188 aa23.77■■□□□ 1.4
ATG9A-222ENST00000488833 ATP6V0A2Q9Y487 856 aa23.77■■□□□ 1.4
ATG9A-222ENST00000488833 ZNF853P0CG23 659 aa23.76■■□□□ 1.39
ATG9A-222ENST00000488833 CALD1Q05682 793 aaKnown RBP23.76■■□□□ 1.39
ATG9A-222ENST00000488833 ANKRD13DQ6ZTN6 518 aa23.76■■□□□ 1.39
ATG9A-222ENST00000488833 IFT57Q9NWB7 429 aa23.76■■□□□ 1.39
ATG9A-222ENST00000488833 HYPKQ9NX55 129 aa23.76■■□□□ 1.39
ATG9A-222ENST00000488833 GJA3Q9Y6H8 435 aa23.76■■□□□ 1.39
ATG9A-222ENST00000488833 ADAMTSL1Q8N6G6 1762 aa23.75■■□□□ 1.39
ATG9A-222ENST00000488833 PPIP5K2O43314 1243 aa23.75■■□□□ 1.39
ATG9A-222ENST00000488833 GNAI1P63096 354 aa23.75■■□□□ 1.39
ATG9A-222ENST00000488833 DDX46Q7L014 1031 aaKnown RBP23.75■■□□□ 1.39
ATG9A-222ENST00000488833 NIM1KQ8IY84 436 aa23.75■■□□□ 1.39
ATG9A-222ENST00000488833 CLEC11AQ9Y240 323 aa23.75■■□□□ 1.39
ATG9A-222ENST00000488833 DDX60Q8IY21 1712 aaKnown RBP23.75■■□□□ 1.39
ATG9A-222ENST00000488833 CREBZFQ9NS37 354 aa23.74■■□□□ 1.39
ATG9A-222ENST00000488833 ATP5J2-PTCD1G3V325 749 aa23.73■■□□□ 1.39
ATG9A-222ENST00000488833 BBOX1O75936 387 aa23.73■■□□□ 1.39
ATG9A-222ENST00000488833 PNMA8AQ86V59 439 aaPredicted RBP23.73■■□□□ 1.39
ATG9A-222ENST00000488833 ISCA1Q9BUE6 129 aa23.73■■□□□ 1.39
ATG9A-222ENST00000488833 TAF1P21675 1872 aa23.73■■□□□ 1.39
ATG9A-222ENST00000488833 LMOD1P29536 600 aaPredicted RBP23.72■■□□□ 1.39
ATG9A-222ENST00000488833 GRAPQ13588 217 aa23.72■■□□□ 1.39
ATG9A-222ENST00000488833 AOC3Q16853 763 aa23.72■■□□□ 1.39
ATG9A-222ENST00000488833 GRAPLQ8TC17 118 aaPredicted RBP23.72■■□□□ 1.39
ATG9A-222ENST00000488833 PASKQ96RG2 1323 aa23.72■■□□□ 1.39
ATG9A-222ENST00000488833 LTBP1Q14766 1721 aa23.71■■□□□ 1.39
ATG9A-222ENST00000488833 ELL2O00472 640 aaPredicted RBP23.71■■□□□ 1.39
ATG9A-222ENST00000488833 DPP8Q6V1X1 898 aaPredicted RBP23.71■■□□□ 1.39
ATG9A-222ENST00000488833 SP8Q8IXZ3 490 aa23.71■■□□□ 1.39
ATG9A-222ENST00000488833 SUPT20HQ8NEM7 779 aa23.71■■□□□ 1.39
ATG9A-222ENST00000488833 GOLGA2Q08379 1002 aa23.7■■□□□ 1.38
ATG9A-222ENST00000488833 FAM89AQ96GI7 184 aa23.7■■□□□ 1.38
ATG9A-222ENST00000488833 MKRN1Q9UHC7 482 aaKnown RBP23.7■■□□□ 1.38
ATG9A-222ENST00000488833 PCNTO95613 3336 aa23.69■■□□□ 1.38
ATG9A-222ENST00000488833 MPNDQ8N594 471 aa23.69■■□□□ 1.38
ATG9A-222ENST00000488833 RTFDC1Q9BY42 306 aaPredicted RBP23.69■■□□□ 1.38
ATG9A-222ENST00000488833 VPS33BQ9H267 617 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms