RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 HLFQ16534 295 aa15.15■□□□□ 0.02
SNU13-208ENST00000488571 TPTE2Q6XPS3 522 aa15.15■□□□□ 0.02
SNU13-208ENST00000488571 TAF1DQ9H5J8 278 aaPredicted RBP15.15■□□□□ 0.02
SNU13-208ENST00000488571 ZNF277Q9NRM2 450 aaPredicted RBP15.15■□□□□ 0.02
SNU13-208ENST00000488571 KDM3BQ7LBC6 1761 aa15.15■□□□□ 0.02
SNU13-208ENST00000488571 SNED1Q8TER0 1413 aa15.15■□□□□ 0.02
SNU13-208ENST00000488571 DLG5Q8TDM6 1919 aa15.15■□□□□ 0.02
SNU13-208ENST00000488571 IQCA1LA6NCM1 817 aa15.14■□□□□ 0.01
SNU13-208ENST00000488571 FAM177BA6PVY3 158 aa15.14■□□□□ 0.01
SNU13-208ENST00000488571 MNX1P50219 401 aaPredicted RBP15.14■□□□□ 0.01
SNU13-208ENST00000488571 CLCN6P51797 869 aa15.14■□□□□ 0.01
SNU13-208ENST00000488571 LDHDQ86WU2 507 aa15.14■□□□□ 0.01
SNU13-208ENST00000488571 MIS18AQ9NYP9 233 aa15.14■□□□□ 0.01
SNU13-208ENST00000488571 CNTNAP1P78357 1384 aa15.13■□□□□ 0.01
SNU13-208ENST00000488571 NUP98P52948 1817 aa15.13■□□□□ 0.01
SNU13-208ENST00000488571 ITGBL1O95965 494 aaPredicted RBP15.13■□□□□ 0.01
SNU13-208ENST00000488571 TAF7Q15545 349 aaPredicted RBP15.13■□□□□ 0.01
SNU13-208ENST00000488571 ABCC12Q96J65 1359 aa15.12■□□□□ 0.01
SNU13-208ENST00000488571 RTKN2Q8IZC4 609 aa15.12■□□□□ 0.01
SNU13-208ENST00000488571 COL4A5P29400 1685 aa15.12■□□□□ 0.01
SNU13-208ENST00000488571 ALDH1B1P30837 517 aa15.11■□□□□ 0.01
SNU13-208ENST00000488571 CRY2Q49AN0 593 aa15.11■□□□□ 0.01
SNU13-208ENST00000488571 ZNF579Q8NAF0 562 aaKnown RBP15.11■□□□□ 0.01
SNU13-208ENST00000488571 HACL1Q9UJ83 578 aa15.11■□□□□ 0.01
SNU13-208ENST00000488571 FZD9O00144 591 aa15.1■□□□□ 0.01
SNU13-208ENST00000488571 IARSP41252 1262 aaKnown RBP15.1■□□□□ 0.01
SNU13-208ENST00000488571 SYNE4Q8N205 404 aa15.1■□□□□ 0.01
SNU13-208ENST00000488571 RNF123Q5XPI4 1314 aa15.1■□□□□ 0.01
SNU13-208ENST00000488571 ERVV-1B6SEH8 477 aa15.09■□□□□ 0.01
SNU13-208ENST00000488571 FOXN1O15353 648 aa15.09■□□□□ 0.01
SNU13-208ENST00000488571 EPHX2P34913 555 aa15.09■□□□□ 0.01
SNU13-208ENST00000488571 EAPPQ56P03 285 aaPredicted RBP15.09■□□□□ 0.01
SNU13-208ENST00000488571 NUTM1Q86Y26 1132 aa15.09■□□□□ 0.01
SNU13-208ENST00000488571 LTBP1Q14766 1721 aa15.09■□□□□ 0.01
SNU13-208ENST00000488571 RIC1Q4ADV7 1423 aa15.09■□□□□ 0.01
SNU13-208ENST00000488571 TMEM88BA6NKF7 163 aa15.08■□□□□ 0
SNU13-208ENST00000488571 GTF2E1P29083 439 aaPredicted RBP15.08■□□□□ 0
SNU13-208ENST00000488571 VEGFBP49765 207 aa15.08■□□□□ 0
SNU13-208ENST00000488571 EIF4A1P60842 406 aaKnown RBP15.08■□□□□ 0
SNU13-208ENST00000488571 TTLL7Q6ZT98 887 aa15.08■□□□□ 0
SNU13-208ENST00000488571 SLC51AQ86UW1 340 aa15.08■□□□□ 0
SNU13-208ENST00000488571 NGEFQ8N5V2 710 aa15.08■□□□□ 0
SNU13-208ENST00000488571 PSMD1Q99460 953 aa15.08■□□□□ 0
SNU13-208ENST00000488571 MAP3K15Q6ZN16 1313 aa15.08■□□□□ 0
SNU13-208ENST00000488571 UBN2Q6ZU65 1347 aa15.08■□□□□ 0
SNU13-208ENST00000488571 GPC2Q8N158 579 aa15.07■□□□□ 0
SNU13-208ENST00000488571 PLEKHF1Q96S99 279 aa15.07■□□□□ 0
SNU13-208ENST00000488571 NYXQ9GZU5 481 aa15.07■□□□□ 0
SNU13-208ENST00000488571 IBTKQ9P2D0 1353 aaPredicted RBP15.07■□□□□ 0
SNU13-208ENST00000488571 HOXA10P31260 410 aaPredicted RBP15.06■□□□□ 0
SNU13-208ENST00000488571 MAP1SQ66K74 1059 aaPredicted RBP15.06■□□□□ 0
SNU13-208ENST00000488571 PNMA8AQ86V59 439 aaPredicted RBP15.06■□□□□ 0
SNU13-208ENST00000488571 CNTROBQ8N137 903 aa15.06■□□□□ 0
SNU13-208ENST00000488571 PNISRQ8TF01 805 aaKnown RBP15.06■□□□□ 0
SNU13-208ENST00000488571 THUMPD2Q9BTF0 503 aaKnown RBP15.06■□□□□ 0
SNU13-208ENST00000488571 RRP7AQ9Y3A4 280 aaKnown RBP15.06■□□□□ 0
SNU13-208ENST00000488571 GPTP24298 496 aa15.05■□□□□ -0
SNU13-208ENST00000488571 SUSD4Q5VX71 490 aa15.05■□□□□ -0
SNU13-208ENST00000488571 RASSF10A6NK89 507 aa15.04■□□□□ -0
SNU13-208ENST00000488571 NTSR2O95665 410 aa15.04■□□□□ -0
SNU13-208ENST00000488571 MYL6BP14649 208 aa15.04■□□□□ -0
SNU13-208ENST00000488571 CC2D2BQ6DHV5 1058 aa15.04■□□□□ -0
SNU13-208ENST00000488571 KIF6Q6ZMV9 814 aa15.04■□□□□ -0
SNU13-208ENST00000488571 C3orf67Q6ZVT6 689 aa15.04■□□□□ -0
SNU13-208ENST00000488571 ZNF34Q8IZ26 560 aa15.04■□□□□ -0
SNU13-208ENST00000488571 JDP2Q8WYK2 163 aa15.04■□□□□ -0
SNU13-208ENST00000488571 ZBTB3Q9H5J0 574 aa15.04■□□□□ -0
SNU13-208ENST00000488571 PRDM10Q9NQV6 1147 aa15.04■□□□□ -0
SNU13-208ENST00000488571 WBP1LQ9NX94 342 aa15.04■□□□□ -0
SNU13-208ENST00000488571 NFE2L2Q16236 605 aa15.03■□□□□ -0
SNU13-208ENST00000488571 LRP10Q7Z4F1 713 aa15.03■□□□□ -0
SNU13-208ENST00000488571 RPGRQ92834 1020 aaKnown RBP15.03■□□□□ -0
SNU13-208ENST00000488571 CTCFP49711 727 aaPredicted RBP15.02■□□□□ -0
SNU13-208ENST00000488571 SCNN1DP51172 638 aa15.02■□□□□ -0
SNU13-208ENST00000488571 EIF6P56537 245 aaKnown RBP15.02■□□□□ -0
SNU13-208ENST00000488571 GIGYF2Q6Y7W6 1299 aaKnown RBP15.02■□□□□ -0
SNU13-208ENST00000488571 CRAMP1Q96RY5 1269 aa15.02■□□□□ -0
SNU13-208ENST00000488571 GJA3Q9Y6H8 435 aa15.02■□□□□ -0
SNU13-208ENST00000488571 THSD7BQ9C0I4 1608 aa15.02□□□□□ -0.01
SNU13-208ENST00000488571 PPEF1O14829 653 aaPredicted RBP15.01□□□□□ -0.01
SNU13-208ENST00000488571 NEFMP07197 916 aa15.01□□□□□ -0.01
SNU13-208ENST00000488571 EPS15P42566 896 aa15.01□□□□□ -0.01
SNU13-208ENST00000488571 FMR1Q06787 632 aaKnown RBP eCLIP15.01□□□□□ -0.01
SNU13-208ENST00000488571 PDIA6Q15084 440 aa15.01□□□□□ -0.01
SNU13-208ENST00000488571 DEFB115Q30KQ5 88 aa15.01□□□□□ -0.01
SNU13-208ENST00000488571 AIDAQ96BJ3 306 aa15.01□□□□□ -0.01
SNU13-208ENST00000488571 RBM17Q96I25 401 aaKnown RBP15.01□□□□□ -0.01
SNU13-208ENST00000488571 ERBB4Q15303 1308 aa15□□□□□ -0.01
SNU13-208ENST00000488571 GRIPAP1Q4V328 841 aa15□□□□□ -0.01
SNU13-208ENST00000488571 LARGE2Q8N3Y3 721 aa15□□□□□ -0.01
SNU13-208ENST00000488571 DDX21Q9NR30 783 aaKnown RBP eCLIP15□□□□□ -0.01
SNU13-208ENST00000488571 LAMB2P55268 1798 aa15□□□□□ -0.01
SNU13-208ENST00000488571 WDR33Q9C0J8 1336 aaKnown RBP14.99□□□□□ -0.01
SNU13-208ENST00000488571 ANKRD36CQ5JPF3 1778 aa14.99□□□□□ -0.01
SNU13-208ENST00000488571 TCERG1O14776 1098 aaKnown RBP14.99□□□□□ -0.01
SNU13-208ENST00000488571 LBX1P52954 281 aa14.99□□□□□ -0.01
SNU13-208ENST00000488571 TRPM7Q96QT4 1865 aa14.99□□□□□ -0.01
SNU13-208ENST00000488571 HSPA8P11142 646 aaKnown RBP14.98□□□□□ -0.01
SNU13-208ENST00000488571 LMOD1P29536 600 aaPredicted RBP14.98□□□□□ -0.01
SNU13-208ENST00000488571 PROSER3Q2NL68 480 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms